BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028062
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631656.1| PREDICTED: 50S ribosomal protein L27-like [V...    89   3e-35
emb|CBI32591.3| unnamed protein product [Vitis vinifera]               89   3e-35
gb|AFK36091.1| unknown [Lotus japonicus]                               88   1e-31
gb|AFK37660.1| unknown [Lotus japonicus]                               88   1e-31
ref|XP_003598463.1| 50S ribosomal protein L27 [Medicago truncatu...    87   3e-31

>ref|XP_003631656.1| PREDICTED: 50S ribosomal protein L27-like [Vitis vinifera]
          Length = 146

 Score = 89.4 bits (220), Expect(2) = 3e-35
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = +2

Query: 2   VKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTLYALK 124
           VKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTLYALK
Sbjct: 63  VKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTLYALK 103



 Score = 85.9 bits (211), Expect(2) = 3e-35
 Identities = 36/46 (78%), Positives = 42/46 (91%)
 Frame = +1

Query: 184 LYALKEGCVKFERHKLSGRKWVHVELKEGHILHPIYTDCSASKLKT 321
           LYALKEGCVKFE+HKLSGRKWVHVE K+GH+LHP+Y D +A +LKT
Sbjct: 99  LYALKEGCVKFEKHKLSGRKWVHVEPKDGHVLHPVYADAAAPRLKT 144


>emb|CBI32591.3| unnamed protein product [Vitis vinifera]
          Length = 136

 Score = 89.4 bits (220), Expect(2) = 3e-35
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = +2

Query: 2   VKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTLYALK 124
           VKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTLYALK
Sbjct: 53  VKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTLYALK 93



 Score = 85.9 bits (211), Expect(2) = 3e-35
 Identities = 36/46 (78%), Positives = 42/46 (91%)
 Frame = +1

Query: 184 LYALKEGCVKFERHKLSGRKWVHVELKEGHILHPIYTDCSASKLKT 321
           LYALKEGCVKFE+HKLSGRKWVHVE K+GH+LHP+Y D +A +LKT
Sbjct: 89  LYALKEGCVKFEKHKLSGRKWVHVEPKDGHVLHPVYADAAAPRLKT 134


>gb|AFK36091.1| unknown [Lotus japonicus]
          Length = 181

 Score = 87.8 bits (216), Expect(2) = 1e-31
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = +2

Query: 2   VKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTLYALK 124
           VKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTL+ALK
Sbjct: 98  VKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTLFALK 138



 Score = 75.5 bits (184), Expect(2) = 1e-31
 Identities = 33/47 (70%), Positives = 40/47 (85%)
 Frame = +1

Query: 184 LYALKEGCVKFERHKLSGRKWVHVELKEGHILHPIYTDCSASKLKTA 324
           L+ALK+G VKFER+KL+GRKWVHVE KEGH+LHP+Y   S S+LK A
Sbjct: 134 LFALKQGLVKFERNKLTGRKWVHVEPKEGHVLHPVYESASESELKVA 180


>gb|AFK37660.1| unknown [Lotus japonicus]
          Length = 146

 Score = 87.8 bits (216), Expect(2) = 1e-31
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = +2

Query: 2   VKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTLYALK 124
           VKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTL+ALK
Sbjct: 63  VKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTLFALK 103



 Score = 75.5 bits (184), Expect(2) = 1e-31
 Identities = 33/47 (70%), Positives = 40/47 (85%)
 Frame = +1

Query: 184 LYALKEGCVKFERHKLSGRKWVHVELKEGHILHPIYTDCSASKLKTA 324
           L+ALK+G VKFER+KL+GRKWVHVE KEGH+LHP+Y   S S+LK A
Sbjct: 99  LFALKQGLVKFERNKLTGRKWVHVEPKEGHVLHPVYESASESELKVA 145


>ref|XP_003598463.1| 50S ribosomal protein L27 [Medicago truncatula]
           gi|217071060|gb|ACJ83890.1| unknown [Medicago
           truncatula] gi|355487511|gb|AES68714.1| 50S ribosomal
           protein L27 [Medicago truncatula]
           gi|388495594|gb|AFK35863.1| unknown [Medicago
           truncatula] gi|388500166|gb|AFK38149.1| unknown
           [Medicago truncatula]
          Length = 148

 Score = 87.0 bits (214), Expect(2) = 3e-31
 Identities = 39/41 (95%), Positives = 41/41 (100%)
 Frame = +2

Query: 2   VKKFGGERVIPGNIIVRQRGTRFHPGNYVGIGKDHTLYALK 124
           VKKFGGERVIPGNIIVRQRGTRFHPGNYVG+GKDHTL+ALK
Sbjct: 63  VKKFGGERVIPGNIIVRQRGTRFHPGNYVGLGKDHTLFALK 103



 Score = 74.7 bits (182), Expect(2) = 3e-31
 Identities = 33/45 (73%), Positives = 40/45 (88%)
 Frame = +1

Query: 184 LYALKEGCVKFERHKLSGRKWVHVELKEGHILHPIYTDCSASKLK 318
           L+ALKEG VKFER+KL+GRKWVHVE KEGH+LHP++ D SAS+ K
Sbjct: 99  LFALKEGWVKFERNKLTGRKWVHVEPKEGHVLHPVFADVSASEPK 143