BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028061
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi...   131   2e-28
ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|2...   117   2e-24
ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like...    92   1e-16
ref|XP_002453277.1| hypothetical protein SORBIDRAFT_04g003070 [S...    82   1e-13
emb|CAE03209.2| OSJNBa0088K19.8 [Oryza sativa Japonica Group]          79   9e-13

>ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
           gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative
           [Ricinus communis]
          Length = 1233

 Score =  131 bits (329), Expect = 2e-28
 Identities = 88/250 (35%), Positives = 121/250 (48%), Gaps = 9/250 (3%)
 Frame = +3

Query: 51  CDGKLPKVNWSQHVSAHNNFSCQNEFVTSNFLYSLPTQKPSGEG---RSMACAIVNGKML 221
           CD KLPK+NWSQH  AH+NFSCQ +F++SNFLYSL  QKP  EG     + C I + + L
Sbjct: 20  CDEKLPKINWSQHDKAHDNFSCQKKFLSSNFLYSLENQKPHSEGVMAMRLTCQIQSFQRL 79

Query: 222 QNPQ---AWKALSSFQVTKRNYLKPGITAPVLQNKISETSQSKTLESSQDTRKNTTLRSS 392
           Q+PQ   AW ALS  Q++ RNYL+PG T P+           K     QD  +  T  SS
Sbjct: 80  QSPQVEKAWHALSCLQISCRNYLQPGKTGPL-----------KNANLLQDVGQRPTFCSS 128

Query: 393 SDIPQKAFGHLGENSSERL---QNFTDSNIRGRDSISFQGTSLQHKLSATDSERRGNTVW 563
           SD         G   SE L   QNF++S  +   S  + G  +    +AT +E       
Sbjct: 129 SD---------GGKYSECLHVHQNFSESGAKNNKSERYMGNYVPQD-NATAAETGNGLQR 178

Query: 564 SSETKASTLYTSAAQVGDRSFVNHAQHANPKNGYVKETVEXXXXXXXXXXXXXXXXXLEH 743
            S+ KAS    + ++    SF +H+ + +      + + +                 +EH
Sbjct: 179 QSQIKASAANNTESKTFSGSFSDHSVYTSHNKESAEASTDFIDDDDLLGNIDVDQIVMEH 238

Query: 744 YQSNCTPQPS 773
            QSNCTP  S
Sbjct: 239 NQSNCTPPNS 248


>ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|222840581|gb|EEE78128.1|
           predicted protein [Populus trichocarpa]
          Length = 1194

 Score =  117 bits (294), Expect = 2e-24
 Identities = 83/255 (32%), Positives = 131/255 (51%), Gaps = 6/255 (2%)
 Frame = +3

Query: 27  NKLSKDSSC-DGKLPKVNWSQHVSAHNNFSCQNEFVTSNFLYSLPTQKPSGEGRSMACAI 203
           N LS+   C D K PKVNW QH +A +N S   +F+++NFLYSL +QKP    R  +C +
Sbjct: 12  NNLSEGRKCEDEKQPKVNWLQHANALDNISSGRKFLSANFLYSLESQKPMSM-RLSSCDV 70

Query: 204 VNGKMLQNPQ---AWKALSSFQVTKRNYLKPGITAPVLQNKISETSQSKTLESSQDTRKN 374
            N + LQ+ Q   AW ALS+ Q++ RNY++PG T PV    +SE       + S +  + 
Sbjct: 71  QNPQRLQSSQVEKAWHALSTLQISSRNYIRPGQTGPV--KNVSE-------DLSGNVGQR 121

Query: 375 TTLRSSSDIPQKAFGHLGENSSERLQNFTDSNIRGRDSISFQGT-SLQHKLSATDSERRG 551
            T +SSS+I + + G            +   N+ G++S + + T ++    +A+  +   
Sbjct: 122 PTFQSSSNISKYSEG-----------VYAQKNLSGKNSEAAKHTGNVIPADNASHVQSGN 170

Query: 552 NTVWSSETKAST-LYTSAAQVGDRSFVNHAQHANPKNGYVKETVEXXXXXXXXXXXXXXX 728
           N  W S+ KAS+ + T+ + V   SFVNH         +V+ + +               
Sbjct: 171 NQGWPSDIKASSGVNTNQSNVLAGSFVNHTVQTCQTKEFVETSADYIDDDDLIESIDVDQ 230

Query: 729 XXLEHYQSNCTPQPS 773
             +EHYQ+ CTPQP+
Sbjct: 231 IVMEHYQATCTPQPA 245


>ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
           [Cucumis sativus] gi|449511185|ref|XP_004163888.1|
           PREDICTED: ATP-dependent DNA helicase Q-like 4A-like,
           partial [Cucumis sativus]
          Length = 1269

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 69/248 (27%), Positives = 117/248 (47%), Gaps = 9/248 (3%)
 Frame = +3

Query: 57  GKLPKVNWSQHVSAHNNFSCQNEFVTSNFLYSLPTQKPSGEGR----SMACAIVNGKMLQ 224
           GK PK+NW +H  AH +FSCQ +F+ SNFL+ LP QKPS  G     ++AC + N + +Q
Sbjct: 76  GKCPKMNWLEHSKAHKDFSCQKKFLCSNFLFCLPEQKPSTTGSTDTGNLACQMQNLQRIQ 135

Query: 225 NPQ---AWKALSSFQVTKRNYLKPGITAPVLQNKISETSQSKTLESSQDTRKNTTLRSSS 395
             Q   AW ALS+FQ++ R+Y KPG T      ++ +       ++ + T  + +  ++S
Sbjct: 136 RSQVEKAWNALSNFQISCRHYAKPGNT-----RQVKDVFSDHPADTGRITSNSLSDANAS 190

Query: 396 DIPQKAFGHLGENSSERLQNFTDSNIRGRDSISFQGTSLQHKLSATDSERRGNTVWSSET 575
              +K             +NF++ ++      SF G++L    +    E + +   ++  
Sbjct: 191 SHHKKVH-----------RNFSEYSVDTTKPSSF-GSNLSASSNIQVMEGQNDVDGNNMA 238

Query: 576 KASTLYTSAAQVGDRSFVNHAQHANPKNGYVKETVEXXXXXXXXXXXXXXXXXLEHYQSN 755
           +  T+  S  Q  D S +      N  + ++++  +                 +E YQS 
Sbjct: 239 RLRTINNSHFQRVDGSVIFATNQKNICSSFLEDEDD------KIIENIDVDQIVEQYQSQ 292

Query: 756 --CTPQPS 773
             CTPQPS
Sbjct: 293 SACTPQPS 300


>ref|XP_002453277.1| hypothetical protein SORBIDRAFT_04g003070 [Sorghum bicolor]
           gi|241933108|gb|EES06253.1| hypothetical protein
           SORBIDRAFT_04g003070 [Sorghum bicolor]
          Length = 1154

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
 Frame = +3

Query: 60  KLPKVNWSQHVSAHNNFSCQNEFVTSNFLYSLPTQKPSGEG-------RSMACAIVNGKM 218
           K P+VNW QH +A   FS ++ F++S+FL+SLPTQKPS E        RS AC I   + 
Sbjct: 5   KSPRVNWPQHENAVQGFSSRDGFLSSSFLFSLPTQKPSPEAPESMLSLRSSACKIQGSER 64

Query: 219 LQNP---QAWKALSSFQVTKRNYLKPGITAPVLQNKISETSQSKTL-ESSQDTRKNTTLR 386
              P   +AW++L + Q  +++YL+PG++A V   K  +   ++T  E S +T K  T+ 
Sbjct: 65  FHAPLIEKAWRSLCNTQAARKSYLRPGLSAKV---KDCDRGHARTCGEGSYNTNKMATV- 120

Query: 387 SSSDIPQKAFGHLGENSSERLQNFTDSNIRGRDSISFQGTSLQHKLSATDSER--RGNTV 560
           S + +P                   +S  +  + IS Q  S    +  + S R  + N V
Sbjct: 121 SGNRMPS-----------------VESTSQPTERISLQNNSSHQPVGISSSMRSYQSNHV 163

Query: 561 WSSETKASTLYTSA 602
              +T+A+  Y  A
Sbjct: 164 AQEDTRATNQYNFA 177


>emb|CAE03209.2| OSJNBa0088K19.8 [Oryza sativa Japonica Group]
          Length = 1164

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 53/179 (29%), Positives = 91/179 (50%), Gaps = 30/179 (16%)
 Frame = +3

Query: 66  PKVNWSQHVSAHNNFSCQNEFVTSNFLYSLPTQKPSGEG--------RSMACAIVNGKML 221
           P+VNWS H +A  +   ++EF++S+FL+SLPTQ+P+ E         RS AC I   + L
Sbjct: 4   PRVNWSDHANAVQSSCIKDEFLSSSFLFSLPTQRPNQEADCTGMLPLRSAACRIQGLERL 63

Query: 222 QNP---QAWKALSSFQVTKRNYLKPGITAPVLQ-----------------NKISETSQSK 341
           Q P   +AW++L + QV ++NYL+PG++  V                   NK+   S+++
Sbjct: 64  QAPSIEKAWRSLRNTQVARKNYLRPGLSGKVKDCDSDHAHTYGTSSSYNVNKMDSVSRNR 123

Query: 342 --TLESSQDTRKNTTLRSSSDIPQKAFGHLGENSSERLQNFTDSNIRGRDSISFQGTSL 512
             T ES   T ++ T+  +S        HL   +    + + ++++   D+I+    SL
Sbjct: 124 NPTQESMHQTTESGTMEKNS-------SHLPAGTKSCTRTYLNNHVVQADTITTTNQSL 175