BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028057
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulga...    69   3e-10
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    69   3e-10
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...    69   4e-10
emb|CAN83120.1| hypothetical protein VITISV_043394 [Vitis vinifera]    68   7e-10
emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]    68   9e-10

>emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
 Frame = +3

Query: 3   ASHV---LTKKLKICQQKLKWWNKNIFGHLDVAIKRSAYYLENILDKIASLPNPPDALFQ 173
           ASH    LT KLK  +++LK WN + FGH+D    R+   LE+ +  +  + N  D   +
Sbjct: 260 ASHTSGNLTDKLKETKKRLKIWNSSEFGHID----RNIEELEDRIHNLDLISNGRDLQLE 315

Query: 174 EEL*YKEEHQKL---LRQKEILWAEKSGQMWFIQGELNTTYFHTVVTRRRHKSNIVRLKK 344
           E    +    +L   LR+KE  WA+ S   W  +G+ NT YFHT+ + R+ K+ I  L  
Sbjct: 316 ELAERRSSQMELWVWLRRKEAFWAQNSRAKWIKEGDKNTKYFHTLASTRKKKNTIPALIT 375

Query: 345 ADG 353
            +G
Sbjct: 376 NNG 378


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 855

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
 Frame = +3

Query: 27   LKICQQKLKWWNKNIFGHLDVAIKRSAYYLE-NILDKIASLPNPPDALFQEEL*YKEEHQ 203
            L   + KLK WN+ +FG  DV  ++ +   E  ++ ++  + N  D L  +E    +E  
Sbjct: 687  LAALKSKLKKWNREVFG--DVNRRKESLMNEIKVVQELLEI-NQTDNLLSKEEELIKEFD 743

Query: 204  KLLRQKEILWAEKSGQMWFIQGELNTTYFHTVVTRRRHKSNIVRLKKADGSEVTDREQ 377
             +L Q+E+LW +KS + W   G+ NT YFHT+   RR ++ I  LK  DGS V+ +++
Sbjct: 744  VVLEQEEVLWFQKSREKWVELGDRNTKYFHTMTVVRRRRNRIEMLKADDGSWVSQQQE 801


>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/113 (32%), Positives = 61/113 (53%)
 Frame = +3

Query: 39  QQKLKWWNKNIFGHLDVAIKRSAYYLENILDKIASLPNPPDALFQEEL*YKEEHQKLLRQ 218
           ++KLK WNK +FG++     +    ++ + D +    N  D L  +E    +E + +L Q
Sbjct: 247 KEKLKKWNKEVFGNIQQRKDKLVQEIQAVQDFLEH--NQTDDLLNKEDVLIKEFEVVLEQ 304

Query: 219 KEILWAEKSGQMWFIQGELNTTYFHTVVTRRRHKSNIVRLKKADGSEVTDREQ 377
           +EI+W +KS + W   G+ NT YFHT    RR ++ I  LK  +G  V + E+
Sbjct: 305 EEIVWFQKSREKWIALGDRNTKYFHTSTIIRRRRNQIEMLKDDEGKWVEEPEE 357


>emb|CAN83120.1| hypothetical protein VITISV_043394 [Vitis vinifera]
          Length = 1596

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 8/121 (6%)
 Frame = +3

Query: 3    ASHVLTKKLKICQQKLKWWNKNIFGHLD----VAIKRSAYYLENILDKIASLPNPPDALF 170
            AS+ L  KLK+ +QKLK WN+ +FG+L+    VA+++  Y+     D++ S      +L 
Sbjct: 800  ASYKLATKLKVIKQKLKVWNREVFGNLESNKLVALQQVDYW-----DQVES----ERSLI 850

Query: 171  QEEL*YK----EEHQKLLRQKEILWAEKSGQMWFIQGELNTTYFHTVVTRRRHKSNIVRL 338
            +EEL  K    E++ K ++ +EI W + S ++W  +G+ NT YFH +    R +  + ++
Sbjct: 851  EEELSRKKEAKEDYAKWVKLEEIHWRQLSRKLWLREGDRNTGYFHRMANAHRRRQTMEKI 910

Query: 339  K 341
            K
Sbjct: 911  K 911


>emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]
          Length = 1848

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/117 (30%), Positives = 69/117 (58%), Gaps = 4/117 (3%)
 Frame = +3

Query: 3    ASHVLTKKLKICQQKLKWWNKNIFGHLD----VAIKRSAYYLENILDKIASLPNPPDALF 170
            AS VL +KLK+ + KLK WN+++FG ++    VA+ +  ++  +  +KI  L        
Sbjct: 901  ASXVLAEKLKVVKTKLKEWNRDVFGRVEYRKNVALXQMQFW--DAKEKIXRLTVEEMEAR 958

Query: 171  QEEL*YKEEHQKLLRQKEILWAEKSGQMWFIQGELNTTYFHTVVTRRRHKSNIVRLK 341
            +E    +EE++K +  +E+ W +KS ++W  +G+ NT +FH +    R ++N+ R++
Sbjct: 959  REA---REEYKKWVLLEEVTWRQKSREVWLKEGDRNTNFFHRMANAHRRRNNMERIR 1012