BLASTX nr result

ID: Coptis25_contig00028053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028053
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278922.1| PREDICTED: uncharacterized protein LOC100267...   118   4e-25
ref|XP_004138401.1| PREDICTED: uncharacterized protein LOC101218...   116   2e-24
ref|XP_002325480.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002520829.1| conserved hypothetical protein [Ricinus comm...   114   8e-24
gb|AFK49396.1| unknown [Lotus japonicus]                              110   1e-22

>ref|XP_002278922.1| PREDICTED: uncharacterized protein LOC100267335 [Vitis vinifera]
           gi|297736525|emb|CBI25396.3| unnamed protein product
           [Vitis vinifera]
          Length = 79

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/70 (85%), Positives = 65/70 (92%), Gaps = 1/70 (1%)
 Frame = +2

Query: 62  MESLQSWISEHKLTSIGTVWASAVGASLAY-TRARSPYKTSLRLIHARMHAQALTLAVLS 238
           ME+LQSW+SEHKLTSIGTVWASAVGASLAY +RA+SP K SLRLIHARMHAQALTLAVLS
Sbjct: 1   MEALQSWVSEHKLTSIGTVWASAVGASLAYNSRAKSPLKPSLRLIHARMHAQALTLAVLS 60

Query: 239 GAAIVHYYDK 268
           GAA  HYY+K
Sbjct: 61  GAAAYHYYEK 70


>ref|XP_004138401.1| PREDICTED: uncharacterized protein LOC101218681 [Cucumis sativus]
           gi|449499144|ref|XP_004160736.1| PREDICTED:
           uncharacterized LOC101218681 [Cucumis sativus]
          Length = 86

 Score =  116 bits (291), Expect = 2e-24
 Identities = 53/68 (77%), Positives = 63/68 (92%)
 Frame = +2

Query: 62  MESLQSWISEHKLTSIGTVWASAVGASLAYTRARSPYKTSLRLIHARMHAQALTLAVLSG 241
           ME++Q+W+SEHKLT+IG +WAS +GASLAYTR+R+P K SLRLIHARMHAQALTLAVLSG
Sbjct: 1   MEAIQAWVSEHKLTTIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSG 60

Query: 242 AAIVHYYD 265
           AA+ HYYD
Sbjct: 61  AAVYHYYD 68


>ref|XP_002325480.1| predicted protein [Populus trichocarpa] gi|222862355|gb|EEE99861.1|
           predicted protein [Populus trichocarpa]
          Length = 84

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/85 (68%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
 Frame = +2

Query: 62  MESLQSWISEHKLTSIGTVWASAVGASLAYTRARSP-YKTSLRLIHARMHAQALTLAVLS 238
           ME++QSW+SEHKL SIGT+WA+A+G SLAYTRAR+P  K SLRLIHARMHAQA+TLAVLS
Sbjct: 1   MEAIQSWVSEHKLASIGTLWATAIGGSLAYTRARTPLVKPSLRLIHARMHAQAITLAVLS 60

Query: 239 GAAIVHYYDKNQQVGEVASQDASKI 313
           GAA+ HYY+K    GE A+   S +
Sbjct: 61  GAAVYHYYEKQ---GESAAPRVSNV 82


>ref|XP_002520829.1| conserved hypothetical protein [Ricinus communis]
           gi|223539960|gb|EEF41538.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/82 (65%), Positives = 65/82 (79%)
 Frame = +2

Query: 62  MESLQSWISEHKLTSIGTVWASAVGASLAYTRARSPYKTSLRLIHARMHAQALTLAVLSG 241
           ME++QSW+S HKL SIG  WA+AVG S AY+R+R+P K SLRLIHARMHAQALTLAVLSG
Sbjct: 1   MEAIQSWVSNHKLASIGAFWATAVGGSFAYSRSRTPLKPSLRLIHARMHAQALTLAVLSG 60

Query: 242 AAIVHYYDKNQQVGEVASQDAS 307
           AAI HYY+K  +  +  S  +S
Sbjct: 61  AAIYHYYEKQGENADAVSSSSS 82


>gb|AFK49396.1| unknown [Lotus japonicus]
          Length = 98

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/69 (76%), Positives = 62/69 (89%), Gaps = 1/69 (1%)
 Frame = +2

Query: 62  MESLQSWISEHKLTSIGTVWASAVGASL-AYTRARSPYKTSLRLIHARMHAQALTLAVLS 238
           MES+QSW+SEHKLTSIG +WAS +GA+L AY+R +SP K SLRLIHARMHAQALTLAVLS
Sbjct: 1   MESVQSWVSEHKLTSIGALWASGIGATLLAYSRTKSPMKPSLRLIHARMHAQALTLAVLS 60

Query: 239 GAAIVHYYD 265
           GAA+ HYY+
Sbjct: 61  GAAVYHYYE 69


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