BLASTX nr result
ID: Coptis25_contig00028053
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028053 (470 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278922.1| PREDICTED: uncharacterized protein LOC100267... 118 4e-25 ref|XP_004138401.1| PREDICTED: uncharacterized protein LOC101218... 116 2e-24 ref|XP_002325480.1| predicted protein [Populus trichocarpa] gi|2... 115 4e-24 ref|XP_002520829.1| conserved hypothetical protein [Ricinus comm... 114 8e-24 gb|AFK49396.1| unknown [Lotus japonicus] 110 1e-22 >ref|XP_002278922.1| PREDICTED: uncharacterized protein LOC100267335 [Vitis vinifera] gi|297736525|emb|CBI25396.3| unnamed protein product [Vitis vinifera] Length = 79 Score = 118 bits (296), Expect = 4e-25 Identities = 60/70 (85%), Positives = 65/70 (92%), Gaps = 1/70 (1%) Frame = +2 Query: 62 MESLQSWISEHKLTSIGTVWASAVGASLAY-TRARSPYKTSLRLIHARMHAQALTLAVLS 238 ME+LQSW+SEHKLTSIGTVWASAVGASLAY +RA+SP K SLRLIHARMHAQALTLAVLS Sbjct: 1 MEALQSWVSEHKLTSIGTVWASAVGASLAYNSRAKSPLKPSLRLIHARMHAQALTLAVLS 60 Query: 239 GAAIVHYYDK 268 GAA HYY+K Sbjct: 61 GAAAYHYYEK 70 >ref|XP_004138401.1| PREDICTED: uncharacterized protein LOC101218681 [Cucumis sativus] gi|449499144|ref|XP_004160736.1| PREDICTED: uncharacterized LOC101218681 [Cucumis sativus] Length = 86 Score = 116 bits (291), Expect = 2e-24 Identities = 53/68 (77%), Positives = 63/68 (92%) Frame = +2 Query: 62 MESLQSWISEHKLTSIGTVWASAVGASLAYTRARSPYKTSLRLIHARMHAQALTLAVLSG 241 ME++Q+W+SEHKLT+IG +WAS +GASLAYTR+R+P K SLRLIHARMHAQALTLAVLSG Sbjct: 1 MEAIQAWVSEHKLTTIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSG 60 Query: 242 AAIVHYYD 265 AA+ HYYD Sbjct: 61 AAVYHYYD 68 >ref|XP_002325480.1| predicted protein [Populus trichocarpa] gi|222862355|gb|EEE99861.1| predicted protein [Populus trichocarpa] Length = 84 Score = 115 bits (288), Expect = 4e-24 Identities = 58/85 (68%), Positives = 70/85 (82%), Gaps = 1/85 (1%) Frame = +2 Query: 62 MESLQSWISEHKLTSIGTVWASAVGASLAYTRARSP-YKTSLRLIHARMHAQALTLAVLS 238 ME++QSW+SEHKL SIGT+WA+A+G SLAYTRAR+P K SLRLIHARMHAQA+TLAVLS Sbjct: 1 MEAIQSWVSEHKLASIGTLWATAIGGSLAYTRARTPLVKPSLRLIHARMHAQAITLAVLS 60 Query: 239 GAAIVHYYDKNQQVGEVASQDASKI 313 GAA+ HYY+K GE A+ S + Sbjct: 61 GAAVYHYYEKQ---GESAAPRVSNV 82 >ref|XP_002520829.1| conserved hypothetical protein [Ricinus communis] gi|223539960|gb|EEF41538.1| conserved hypothetical protein [Ricinus communis] Length = 90 Score = 114 bits (285), Expect = 8e-24 Identities = 54/82 (65%), Positives = 65/82 (79%) Frame = +2 Query: 62 MESLQSWISEHKLTSIGTVWASAVGASLAYTRARSPYKTSLRLIHARMHAQALTLAVLSG 241 ME++QSW+S HKL SIG WA+AVG S AY+R+R+P K SLRLIHARMHAQALTLAVLSG Sbjct: 1 MEAIQSWVSNHKLASIGAFWATAVGGSFAYSRSRTPLKPSLRLIHARMHAQALTLAVLSG 60 Query: 242 AAIVHYYDKNQQVGEVASQDAS 307 AAI HYY+K + + S +S Sbjct: 61 AAIYHYYEKQGENADAVSSSSS 82 >gb|AFK49396.1| unknown [Lotus japonicus] Length = 98 Score = 110 bits (275), Expect = 1e-22 Identities = 53/69 (76%), Positives = 62/69 (89%), Gaps = 1/69 (1%) Frame = +2 Query: 62 MESLQSWISEHKLTSIGTVWASAVGASL-AYTRARSPYKTSLRLIHARMHAQALTLAVLS 238 MES+QSW+SEHKLTSIG +WAS +GA+L AY+R +SP K SLRLIHARMHAQALTLAVLS Sbjct: 1 MESVQSWVSEHKLTSIGALWASGIGATLLAYSRTKSPMKPSLRLIHARMHAQALTLAVLS 60 Query: 239 GAAIVHYYD 265 GAA+ HYY+ Sbjct: 61 GAAVYHYYE 69