BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028048
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containi...   105   3e-21
ref|NP_001047017.1| Os02g0529900 [Oryza sativa Japonica Group] g...    89   5e-16
gb|EAY86119.1| hypothetical protein OsI_07491 [Oryza sativa Indi...    89   5e-16
ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containi...    85   7e-15
gb|AFW71662.1| hypothetical protein ZEAMMB73_019211 [Zea mays]         84   1e-14

>ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 906

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/86 (58%), Positives = 65/86 (75%)
 Frame = +3

Query: 6   DEFVIANVLKWCSLQLDLEAGKALHSQIVKHDLLSDSYVISSLIDMYSKCKIPEAAQRIF 185
           DEF++ ++LKWCSL+  LE+GK  HS I+K DL SDSYV+SSLIDMYSKC I EAA+R+F
Sbjct: 338 DEFIMTSLLKWCSLESSLESGKMFHSLIIKLDLKSDSYVLSSLIDMYSKCGIWEAAKRVF 397

Query: 186 ERVKGKGMVTWAAIIAGYCCNGWFEE 263
            RV+      W+A+I+G+  NG F E
Sbjct: 398 TRVEQPDTAPWSALISGHSWNGCFAE 423



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/86 (36%), Positives = 48/86 (55%)
 Frame = +3

Query: 6   DEFVIANVLKWCSLQLDLEAGKALHSQIVKHDLLSDSYVISSLIDMYSKCKIPEAAQRIF 185
           D FV A VL+ C +   L  G+ +H  +VK   + DS+V ++L+ MY  C   E A  +F
Sbjct: 61  DSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVF 120

Query: 186 ERVKGKGMVTWAAIIAGYCCNGWFEE 263
             +    +V W++I++GY  NG  EE
Sbjct: 121 GGIDKPDLVGWSSILSGYVKNGLEEE 146


>ref|NP_001047017.1| Os02g0529900 [Oryza sativa Japonica Group]
           gi|49388326|dbj|BAD25438.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113536548|dbj|BAF08931.1| Os02g0529900 [Oryza
           sativa Japonica Group] gi|125582364|gb|EAZ23295.1|
           hypothetical protein OsJ_06992 [Oryza sativa Japonica
           Group] gi|215696993|dbj|BAG90987.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 787

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/85 (49%), Positives = 58/85 (68%)
 Frame = +3

Query: 6   DEFVIANVLKWCSLQLDLEAGKALHSQIVKHDLLSDSYVISSLIDMYSKCKIPEAAQRIF 185
           D+F++A+ LK C+  LDL AG+ LH+ ++K D+  D +VISSL+DMY+KC   E A  +F
Sbjct: 381 DQFIVASSLKSCASDLDLAAGRMLHACVLKFDVNPDPFVISSLVDMYAKCGSLEEAHILF 440

Query: 186 ERVKGKGMVTWAAIIAGYCCNGWFE 260
            R K    V W+AII+G C NG FE
Sbjct: 441 SRTKDPCTVAWSAIISGSCLNGQFE 465


>gb|EAY86119.1| hypothetical protein OsI_07491 [Oryza sativa Indica Group]
          Length = 787

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/85 (49%), Positives = 58/85 (68%)
 Frame = +3

Query: 6   DEFVIANVLKWCSLQLDLEAGKALHSQIVKHDLLSDSYVISSLIDMYSKCKIPEAAQRIF 185
           D+F++A+ LK C+  LDL AG+ LH+ ++K D+  D +VISSL+DMY+KC   E A  +F
Sbjct: 381 DQFIVASSLKSCASDLDLAAGRMLHACVLKFDVNPDPFVISSLVDMYAKCGSLEEAHILF 440

Query: 186 ERVKGKGMVTWAAIIAGYCCNGWFE 260
            R K    V W+AII+G C NG FE
Sbjct: 441 SRTKDPCTVAWSAIISGSCLNGQFE 465


>ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 789

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/85 (44%), Positives = 58/85 (68%)
 Frame = +3

Query: 6   DEFVIANVLKWCSLQLDLEAGKALHSQIVKHDLLSDSYVISSLIDMYSKCKIPEAAQRIF 185
           D+F++A+ L+ C+  LDL AG+ LH+ I+K ++ SD++V SSL+DMY+KC   E +  +F
Sbjct: 383 DQFIVASSLRSCASDLDLAAGRMLHAYILKLNMNSDAFVTSSLVDMYAKCGCLEESHLLF 442

Query: 186 ERVKGKGMVTWAAIIAGYCCNGWFE 260
              K  G   W+A+I+G C NG FE
Sbjct: 443 STTKYPGTAEWSAVISGNCLNGQFE 467


>gb|AFW71662.1| hypothetical protein ZEAMMB73_019211 [Zea mays]
          Length = 798

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/84 (46%), Positives = 56/84 (66%)
 Frame = +3

Query: 6   DEFVIANVLKWCSLQLDLEAGKALHSQIVKHDLLSDSYVISSLIDMYSKCKIPEAAQRIF 185
           D+F++A+ LK C+  LDL AG+ LH+ I+K D+  DS+V SSL+DMY+KC   E +  +F
Sbjct: 394 DQFIVASSLKSCASGLDLLAGRMLHACILKSDMNPDSFVTSSLLDMYAKCGALEESNLLF 453

Query: 186 ERVKGKGMVTWAAIIAGYCCNGWF 257
            R K  G   W+A I+G C NG +
Sbjct: 454 SRTKNPGTAEWSAAISGNCLNGQY 477