BLASTX nr result

ID: Coptis25_contig00028029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028029
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80415.1| hypothetical protein VITISV_003095 [Vitis vinifera]    59   4e-07
emb|CAN67224.1| hypothetical protein VITISV_029053 [Vitis vinifera]    55   6e-06

>emb|CAN80415.1| hypothetical protein VITISV_003095 [Vitis vinifera]
          Length = 495

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 23/58 (39%), Positives = 39/58 (67%)
 Frame = +3

Query: 6   WKGIVSRWDDFAKGVKFKLGTGDSISFWEDM*VGDMPLKVKFSDMYMLASNKKAQISD 179
           WK I + W D   G+ FK+G G+ + FW+D   G++PL+  F D++ +AS+K A+++D
Sbjct: 394 WKTIRNGWKDLKVGMXFKVGFGNRVKFWKDRWCGBVPLRDXFPDLFSIASSKDARVAD 451


>emb|CAN67224.1| hypothetical protein VITISV_029053 [Vitis vinifera]
          Length = 1120

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/68 (36%), Positives = 37/68 (54%)
 Frame = +3

Query: 6    WKGIVSRWDDFAKGVKFKLGTGDSISFWEDM*VGDMPLKVKFSDMYMLASNKKAQISDYI 185
            WK I   + DF+K  +F +G G+ I FWED+  GD PL V++  +  + +NK   IS  +
Sbjct: 900  WKAIAQVFQDFSKFTRFMVGDGERIRFWEDLWWGDQPLGVRYPRLLRVVTNKNIPISSIL 959

Query: 186  *RERVKGW 209
               R   W
Sbjct: 960  ESTRPFSW 967


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