BLASTX nr result

ID: Coptis25_contig00028021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028021
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4...   292   2e-77
ref|XP_002321011.1| multidrug resistance protein ABC transporter...   292   2e-77
emb|CBI36841.3| unnamed protein product [Vitis vinifera]              291   5e-77
ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...   291   5e-77
ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata] gi...   289   1e-76

>ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1501

 Score =  292 bits (748), Expect = 2e-77
 Identities = 138/171 (80%), Positives = 155/171 (90%)
 Frame = +2

Query: 2    MSCFVENRIISVERIKQFINIPSEAPWHIEGCIPSPNWPTHGDVDIKDLQVRYRPNTPLI 181
            MSCF+EN+++SVERIKQF NIPSEA W+I+  +P  NWP  G VDIKDLQVRYRPNTPL+
Sbjct: 1216 MSCFIENKMVSVERIKQFTNIPSEASWNIKDRLPPANWPGEGHVDIKDLQVRYRPNTPLV 1275

Query: 182  LKGITLSIQGGEKIGVVGRTGSGKSTLIQALFRLLEPSGGKIVIDGIDISTLGLHDLRSR 361
            LKGITLSI GGEKIGVVGRTGSGKSTLIQ  FRL+EP+GGKI+IDGIDIS LGLHDLRSR
Sbjct: 1276 LKGITLSINGGEKIGVVGRTGSGKSTLIQVFFRLVEPTGGKIIIDGIDISALGLHDLRSR 1335

Query: 362  FGIIPQEPVLFQGTIRSNIDPTGLYSDEEIWRSLERCQLKDVVMAKPDKLD 514
            FGIIPQEPVLF+GT+RSNIDPTG Y+DEEIW+SLERCQLKD V +KP+KLD
Sbjct: 1336 FGIIPQEPVLFEGTVRSNIDPTGQYTDEEIWKSLERCQLKDAVASKPEKLD 1386


>ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222861784|gb|EEE99326.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1507

 Score =  292 bits (747), Expect = 2e-77
 Identities = 138/171 (80%), Positives = 154/171 (90%)
 Frame = +2

Query: 2    MSCFVENRIISVERIKQFINIPSEAPWHIEGCIPSPNWPTHGDVDIKDLQVRYRPNTPLI 181
            +SCFVENR++SVERIKQF NI SEA W IE  +P PNWP  G+VD+KDLQVRYRPNTPL+
Sbjct: 1222 LSCFVENRMVSVERIKQFTNISSEAAWKIEDRVPPPNWPAIGNVDLKDLQVRYRPNTPLV 1281

Query: 182  LKGITLSIQGGEKIGVVGRTGSGKSTLIQALFRLLEPSGGKIVIDGIDISTLGLHDLRSR 361
            LKGITLSIQGGEKIGVVGRTGSGKST+IQ  FRL+EP+GGKI+IDGIDI  LGLHDLRSR
Sbjct: 1282 LKGITLSIQGGEKIGVVGRTGSGKSTMIQVFFRLVEPTGGKIIIDGIDICMLGLHDLRSR 1341

Query: 362  FGIIPQEPVLFQGTIRSNIDPTGLYSDEEIWRSLERCQLKDVVMAKPDKLD 514
            FGIIPQEPVLF+GT+RSN+DP G Y+DEEIW SLERCQLKDVV AKP+KLD
Sbjct: 1342 FGIIPQEPVLFEGTVRSNVDPVGQYTDEEIWESLERCQLKDVVAAKPEKLD 1392


>emb|CBI36841.3| unnamed protein product [Vitis vinifera]
          Length = 1079

 Score =  291 bits (744), Expect = 5e-77
 Identities = 135/171 (78%), Positives = 155/171 (90%)
 Frame = +2

Query: 2    MSCFVENRIISVERIKQFINIPSEAPWHIEGCIPSPNWPTHGDVDIKDLQVRYRPNTPLI 181
            MSCFVEN+++SVERIKQF NIPSEA W I+  +P PNWPTHG+V++KDLQVRYRPN+PL+
Sbjct: 794  MSCFVENKMVSVERIKQFTNIPSEAAWQIKDRLPPPNWPTHGNVELKDLQVRYRPNSPLV 853

Query: 182  LKGITLSIQGGEKIGVVGRTGSGKSTLIQALFRLLEPSGGKIVIDGIDISTLGLHDLRSR 361
            LKGITL+I+G EKIGVVGRTGSGKSTL+Q  FRL+EPSGGKI+IDGIDI  LGLHDLRSR
Sbjct: 854  LKGITLNIRGKEKIGVVGRTGSGKSTLVQVFFRLVEPSGGKIIIDGIDIGMLGLHDLRSR 913

Query: 362  FGIIPQEPVLFQGTIRSNIDPTGLYSDEEIWRSLERCQLKDVVMAKPDKLD 514
            FGIIPQEPVLF+GT+RSN+DP G YSDEEIW+SLE CQLK+VV  KPDKLD
Sbjct: 914  FGIIPQEPVLFEGTVRSNVDPVGQYSDEEIWQSLEHCQLKEVVAGKPDKLD 964


>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score =  291 bits (744), Expect = 5e-77
 Identities = 135/171 (78%), Positives = 155/171 (90%)
 Frame = +2

Query: 2    MSCFVENRIISVERIKQFINIPSEAPWHIEGCIPSPNWPTHGDVDIKDLQVRYRPNTPLI 181
            MSCFVEN+++SVERIKQF NIPSEA W I+  +P PNWPTHG+V++KDLQVRYRPN+PL+
Sbjct: 1224 MSCFVENKMVSVERIKQFTNIPSEAAWQIKDRLPPPNWPTHGNVELKDLQVRYRPNSPLV 1283

Query: 182  LKGITLSIQGGEKIGVVGRTGSGKSTLIQALFRLLEPSGGKIVIDGIDISTLGLHDLRSR 361
            LKGITL+I+G EKIGVVGRTGSGKSTL+Q  FRL+EPSGGKI+IDGIDI  LGLHDLRSR
Sbjct: 1284 LKGITLNIRGKEKIGVVGRTGSGKSTLVQVFFRLVEPSGGKIIIDGIDIGMLGLHDLRSR 1343

Query: 362  FGIIPQEPVLFQGTIRSNIDPTGLYSDEEIWRSLERCQLKDVVMAKPDKLD 514
            FGIIPQEPVLF+GT+RSN+DP G YSDEEIW+SLE CQLK+VV  KPDKLD
Sbjct: 1344 FGIIPQEPVLFEGTVRSNVDPVGQYSDEEIWQSLEHCQLKEVVAGKPDKLD 1394


>ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata] gi|297326163|gb|EFH56583.1|
            ATMRP4 [Arabidopsis lyrata subsp. lyrata]
          Length = 1525

 Score =  289 bits (740), Expect = 1e-76
 Identities = 137/171 (80%), Positives = 154/171 (90%)
 Frame = +2

Query: 2    MSCFVENRIISVERIKQFINIPSEAPWHIEGCIPSPNWPTHGDVDIKDLQVRYRPNTPLI 181
            MSCFVEN+++SVERIKQF NIPSE+ W  +  +P  NWP HGDV ++DL+VRYRPNTPL+
Sbjct: 1240 MSCFVENKMVSVERIKQFTNIPSESEWERKETLPPSNWPFHGDVHLEDLKVRYRPNTPLV 1299

Query: 182  LKGITLSIQGGEKIGVVGRTGSGKSTLIQALFRLLEPSGGKIVIDGIDISTLGLHDLRSR 361
            LKGITL I+GGEK+GVVGRTGSGKSTLIQ LFRL+EPSGGKI+IDGIDISTLGLHDLRSR
Sbjct: 1300 LKGITLDIKGGEKVGVVGRTGSGKSTLIQVLFRLVEPSGGKIIIDGIDISTLGLHDLRSR 1359

Query: 362  FGIIPQEPVLFQGTIRSNIDPTGLYSDEEIWRSLERCQLKDVVMAKPDKLD 514
            FGIIPQEPVLF+GT+RSNIDPT  YSDEEIW SLERCQLKDVV  KP+KLD
Sbjct: 1360 FGIIPQEPVLFEGTVRSNIDPTEQYSDEEIWMSLERCQLKDVVATKPEKLD 1410


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