BLASTX nr result
ID: Coptis25_contig00028021
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028021 (515 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4... 292 2e-77 ref|XP_002321011.1| multidrug resistance protein ABC transporter... 292 2e-77 emb|CBI36841.3| unnamed protein product [Vitis vinifera] 291 5e-77 ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4... 291 5e-77 ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata] gi... 289 1e-76 >ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4-like [Glycine max] Length = 1501 Score = 292 bits (748), Expect = 2e-77 Identities = 138/171 (80%), Positives = 155/171 (90%) Frame = +2 Query: 2 MSCFVENRIISVERIKQFINIPSEAPWHIEGCIPSPNWPTHGDVDIKDLQVRYRPNTPLI 181 MSCF+EN+++SVERIKQF NIPSEA W+I+ +P NWP G VDIKDLQVRYRPNTPL+ Sbjct: 1216 MSCFIENKMVSVERIKQFTNIPSEASWNIKDRLPPANWPGEGHVDIKDLQVRYRPNTPLV 1275 Query: 182 LKGITLSIQGGEKIGVVGRTGSGKSTLIQALFRLLEPSGGKIVIDGIDISTLGLHDLRSR 361 LKGITLSI GGEKIGVVGRTGSGKSTLIQ FRL+EP+GGKI+IDGIDIS LGLHDLRSR Sbjct: 1276 LKGITLSINGGEKIGVVGRTGSGKSTLIQVFFRLVEPTGGKIIIDGIDISALGLHDLRSR 1335 Query: 362 FGIIPQEPVLFQGTIRSNIDPTGLYSDEEIWRSLERCQLKDVVMAKPDKLD 514 FGIIPQEPVLF+GT+RSNIDPTG Y+DEEIW+SLERCQLKD V +KP+KLD Sbjct: 1336 FGIIPQEPVLFEGTVRSNIDPTGQYTDEEIWKSLERCQLKDAVASKPEKLD 1386 >ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] gi|222861784|gb|EEE99326.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] Length = 1507 Score = 292 bits (747), Expect = 2e-77 Identities = 138/171 (80%), Positives = 154/171 (90%) Frame = +2 Query: 2 MSCFVENRIISVERIKQFINIPSEAPWHIEGCIPSPNWPTHGDVDIKDLQVRYRPNTPLI 181 +SCFVENR++SVERIKQF NI SEA W IE +P PNWP G+VD+KDLQVRYRPNTPL+ Sbjct: 1222 LSCFVENRMVSVERIKQFTNISSEAAWKIEDRVPPPNWPAIGNVDLKDLQVRYRPNTPLV 1281 Query: 182 LKGITLSIQGGEKIGVVGRTGSGKSTLIQALFRLLEPSGGKIVIDGIDISTLGLHDLRSR 361 LKGITLSIQGGEKIGVVGRTGSGKST+IQ FRL+EP+GGKI+IDGIDI LGLHDLRSR Sbjct: 1282 LKGITLSIQGGEKIGVVGRTGSGKSTMIQVFFRLVEPTGGKIIIDGIDICMLGLHDLRSR 1341 Query: 362 FGIIPQEPVLFQGTIRSNIDPTGLYSDEEIWRSLERCQLKDVVMAKPDKLD 514 FGIIPQEPVLF+GT+RSN+DP G Y+DEEIW SLERCQLKDVV AKP+KLD Sbjct: 1342 FGIIPQEPVLFEGTVRSNVDPVGQYTDEEIWESLERCQLKDVVAAKPEKLD 1392 >emb|CBI36841.3| unnamed protein product [Vitis vinifera] Length = 1079 Score = 291 bits (744), Expect = 5e-77 Identities = 135/171 (78%), Positives = 155/171 (90%) Frame = +2 Query: 2 MSCFVENRIISVERIKQFINIPSEAPWHIEGCIPSPNWPTHGDVDIKDLQVRYRPNTPLI 181 MSCFVEN+++SVERIKQF NIPSEA W I+ +P PNWPTHG+V++KDLQVRYRPN+PL+ Sbjct: 794 MSCFVENKMVSVERIKQFTNIPSEAAWQIKDRLPPPNWPTHGNVELKDLQVRYRPNSPLV 853 Query: 182 LKGITLSIQGGEKIGVVGRTGSGKSTLIQALFRLLEPSGGKIVIDGIDISTLGLHDLRSR 361 LKGITL+I+G EKIGVVGRTGSGKSTL+Q FRL+EPSGGKI+IDGIDI LGLHDLRSR Sbjct: 854 LKGITLNIRGKEKIGVVGRTGSGKSTLVQVFFRLVEPSGGKIIIDGIDIGMLGLHDLRSR 913 Query: 362 FGIIPQEPVLFQGTIRSNIDPTGLYSDEEIWRSLERCQLKDVVMAKPDKLD 514 FGIIPQEPVLF+GT+RSN+DP G YSDEEIW+SLE CQLK+VV KPDKLD Sbjct: 914 FGIIPQEPVLFEGTVRSNVDPVGQYSDEEIWQSLEHCQLKEVVAGKPDKLD 964 >ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera] Length = 1509 Score = 291 bits (744), Expect = 5e-77 Identities = 135/171 (78%), Positives = 155/171 (90%) Frame = +2 Query: 2 MSCFVENRIISVERIKQFINIPSEAPWHIEGCIPSPNWPTHGDVDIKDLQVRYRPNTPLI 181 MSCFVEN+++SVERIKQF NIPSEA W I+ +P PNWPTHG+V++KDLQVRYRPN+PL+ Sbjct: 1224 MSCFVENKMVSVERIKQFTNIPSEAAWQIKDRLPPPNWPTHGNVELKDLQVRYRPNSPLV 1283 Query: 182 LKGITLSIQGGEKIGVVGRTGSGKSTLIQALFRLLEPSGGKIVIDGIDISTLGLHDLRSR 361 LKGITL+I+G EKIGVVGRTGSGKSTL+Q FRL+EPSGGKI+IDGIDI LGLHDLRSR Sbjct: 1284 LKGITLNIRGKEKIGVVGRTGSGKSTLVQVFFRLVEPSGGKIIIDGIDIGMLGLHDLRSR 1343 Query: 362 FGIIPQEPVLFQGTIRSNIDPTGLYSDEEIWRSLERCQLKDVVMAKPDKLD 514 FGIIPQEPVLF+GT+RSN+DP G YSDEEIW+SLE CQLK+VV KPDKLD Sbjct: 1344 FGIIPQEPVLFEGTVRSNVDPVGQYSDEEIWQSLEHCQLKEVVAGKPDKLD 1394 >ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata] gi|297326163|gb|EFH56583.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata] Length = 1525 Score = 289 bits (740), Expect = 1e-76 Identities = 137/171 (80%), Positives = 154/171 (90%) Frame = +2 Query: 2 MSCFVENRIISVERIKQFINIPSEAPWHIEGCIPSPNWPTHGDVDIKDLQVRYRPNTPLI 181 MSCFVEN+++SVERIKQF NIPSE+ W + +P NWP HGDV ++DL+VRYRPNTPL+ Sbjct: 1240 MSCFVENKMVSVERIKQFTNIPSESEWERKETLPPSNWPFHGDVHLEDLKVRYRPNTPLV 1299 Query: 182 LKGITLSIQGGEKIGVVGRTGSGKSTLIQALFRLLEPSGGKIVIDGIDISTLGLHDLRSR 361 LKGITL I+GGEK+GVVGRTGSGKSTLIQ LFRL+EPSGGKI+IDGIDISTLGLHDLRSR Sbjct: 1300 LKGITLDIKGGEKVGVVGRTGSGKSTLIQVLFRLVEPSGGKIIIDGIDISTLGLHDLRSR 1359 Query: 362 FGIIPQEPVLFQGTIRSNIDPTGLYSDEEIWRSLERCQLKDVVMAKPDKLD 514 FGIIPQEPVLF+GT+RSNIDPT YSDEEIW SLERCQLKDVV KP+KLD Sbjct: 1360 FGIIPQEPVLFEGTVRSNIDPTEQYSDEEIWMSLERCQLKDVVATKPEKLD 1410