BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028015
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 ...   146   2e-33
ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [...   146   3e-33
ref|XP_002317931.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
emb|CBI15412.3| unnamed protein product [Vitis vinifera]              141   9e-32
ref|XP_002463122.1| hypothetical protein SORBIDRAFT_02g038230 [S...   133   2e-29

>ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 [Vitis vinifera]
          Length = 902

 Score =  146 bits (369), Expect = 2e-33
 Identities = 70/100 (70%), Positives = 85/100 (85%)
 Frame = +2

Query: 2    FANFPESVVALAREKAAELEDFSSISITSNDAKEEVGSKRKRVCGPDDISRGAARAHKFL 181
            FANFPESVV LAREKAAELEDFS   I SNDA ++VGSKRKR   PDDISRGAARAH+FL
Sbjct: 802  FANFPESVVTLAREKAAELEDFSPTEIVSNDASDKVGSKRKRESSPDDISRGAARAHQFL 861

Query: 182  QDFSSLPIDEMDLQQTLEHVSKLRNELVKDAADCCWLEQF 301
            ++FS LP+++MDL++ L+ VSKL+N+L KDA +C WL+QF
Sbjct: 862  KEFSDLPLEKMDLKEALQQVSKLKNDLEKDAVNCHWLQQF 901


>ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
            gi|223549157|gb|EEF50646.1| DNA mismatch repair protein
            MSH2, putative [Ricinus communis]
          Length = 936

 Score =  146 bits (368), Expect = 3e-33
 Identities = 71/100 (71%), Positives = 84/100 (84%)
 Frame = +2

Query: 2    FANFPESVVALAREKAAELEDFSSISITSNDAKEEVGSKRKRVCGPDDISRGAARAHKFL 181
            FANFPESVVALAREKAAELEDFS  +I SND  E+VGSKR R C PDD+SRGAARAHKFL
Sbjct: 836  FANFPESVVALAREKAAELEDFSPNAIVSNDTTEKVGSKRNRKCDPDDVSRGAARAHKFL 895

Query: 182  QDFSSLPIDEMDLQQTLEHVSKLRNELVKDAADCCWLEQF 301
            ++FS LP++ MDL++ L+ VSKL+  L KDAA+C WL+QF
Sbjct: 896  KEFSDLPLETMDLKEALQQVSKLKEGLEKDAANCQWLKQF 935


>ref|XP_002317931.1| predicted protein [Populus trichocarpa] gi|222858604|gb|EEE96151.1|
            predicted protein [Populus trichocarpa]
          Length = 944

 Score =  144 bits (363), Expect = 1e-32
 Identities = 69/100 (69%), Positives = 84/100 (84%)
 Frame = +2

Query: 2    FANFPESVVALAREKAAELEDFSSISITSNDAKEEVGSKRKRVCGPDDISRGAARAHKFL 181
            FANFPESVV LAREKAAELEDFS  +I S+DA+EEVGSKRKR C  DD+S+GAARAH+FL
Sbjct: 844  FANFPESVVTLAREKAAELEDFSPTAIISDDAREEVGSKRKRECNMDDMSKGAARAHRFL 903

Query: 182  QDFSSLPIDEMDLQQTLEHVSKLRNELVKDAADCCWLEQF 301
            +DFS LP+D MDL+Q L  + KL+++L KDA +C WL+QF
Sbjct: 904  KDFSDLPLDTMDLKQALLQIGKLKDDLEKDAVNCHWLQQF 943


>emb|CBI15412.3| unnamed protein product [Vitis vinifera]
          Length = 945

 Score =  141 bits (355), Expect = 9e-32
 Identities = 70/103 (67%), Positives = 85/103 (82%), Gaps = 3/103 (2%)
 Frame = +2

Query: 2    FANFPESVVALAREKAAELEDFSSISITSNDAKEE---VGSKRKRVCGPDDISRGAARAH 172
            FANFPESVV LAREKAAELEDFS   I SNDA ++   VGSKRKR   PDDISRGAARAH
Sbjct: 842  FANFPESVVTLAREKAAELEDFSPTEIVSNDASDKGLKVGSKRKRESSPDDISRGAARAH 901

Query: 173  KFLQDFSSLPIDEMDLQQTLEHVSKLRNELVKDAADCCWLEQF 301
            +FL++FS LP+++MDL++ L+ VSKL+N+L KDA +C WL+QF
Sbjct: 902  QFLKEFSDLPLEKMDLKEALQQVSKLKNDLEKDAVNCHWLQQF 944


>ref|XP_002463122.1| hypothetical protein SORBIDRAFT_02g038230 [Sorghum bicolor]
            gi|241926499|gb|EER99643.1| hypothetical protein
            SORBIDRAFT_02g038230 [Sorghum bicolor]
          Length = 942

 Score =  133 bits (335), Expect = 2e-29
 Identities = 64/100 (64%), Positives = 84/100 (84%)
 Frame = +2

Query: 2    FANFPESVVALAREKAAELEDFSSISITSNDAKEEVGSKRKRVCGPDDISRGAARAHKFL 181
            FANFPE+VVALA+ KAAELEDFS+    S+D+K+EVGSKRKRV  PDD++RGAARA  FL
Sbjct: 842  FANFPEAVVALAKSKAAELEDFSTTPTFSDDSKDEVGSKRKRVFSPDDVTRGAARARLFL 901

Query: 182  QDFSSLPIDEMDLQQTLEHVSKLRNELVKDAADCCWLEQF 301
            +DF++LP+DEMD  + +E V+K++++L KDAAD  WL+QF
Sbjct: 902  EDFAALPVDEMDRSKIVEMVTKMKSDLQKDAADNPWLQQF 941