BLASTX nr result
ID: Coptis25_contig00028008
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00028008
(1215 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g... 158 2e-36
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g... 158 3e-36
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi... 154 3e-35
ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cuc... 130 5e-28
ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm... 124 4e-26
>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
gi|222843314|gb|EEE80861.1| f-box family protein [Populus
trichocarpa]
Length = 408
Score = 158 bits (400), Expect = 2e-36
Identities = 124/392 (31%), Positives = 192/392 (48%), Gaps = 37/392 (9%)
Frame = -2
Query: 1124 QTKSMENLPAEVIQEIFSRLPITSLFENRYVCQTWHGLINDRRLSFMHYVQASRRINPTT 945
QT ME LP E+ Q+I SRLPITSL + + VC+ W + D + ++ +++ +P
Sbjct: 21 QTTGMELLPREIAQDILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYLSCSTQETDPCV 80
Query: 944 SL-----ILYNGPGLYYIPDFNTCQNV---VVFNNLPFKSWLPYFKVVASQNGFICVAAD 789
L I N LY++ DF + V PF S +P F+VV S NG +C++ D
Sbjct: 81 ILHCDFPIRNN---LYFV-DFAAHEEEKEKVKRIRAPFSSMMPEFEVVGSCNGLLCLS-D 135
Query: 788 GCSYRNIFICNPVIGEWFLVPRSETLYGTN--YGFGYELETNEYKIVRMRFCKDEDNY-- 621
+++I NP G + +P+S +GFG+ +TNEYK++R+ + ++
Sbjct: 136 SLFNDSLYIYNPFTGRYKELPKSLQYPDQEVVFGFGFNPKTNEYKVIRIVYYRNGHGRYP 195
Query: 620 ----------DVEIHKLGTSTWRDIGKVK-RIIGDDPGASGVLVSGCLHWLGIVNSTNKP 474
V+I LG WR +GKV R++ AS LV+G LHW+ NKP
Sbjct: 196 RSRRIIYPLSQVQILTLGCPGWRSLGKVSYRLVRR---ASETLVNGRLHWVSRP-CRNKP 251
Query: 473 S--IIIVNLAEEKLSDILPVPIERCLGKIDQHFRLVDLAGRLXXXXXXXXXXVNVWVVKE 300
+ ++ +L +E+ ++ P P L + D H L L G L + +WV+KE
Sbjct: 252 ARRLVSFDLTDEQFREV-PKPDCGGLNRCDYH--LAVLRGCLSVAVYCNYGRLEIWVMKE 308
Query: 299 YGIWESWIKHCNISXXXXXXXXXXXPKRF------------RPLLIQENGEILVEINNGA 156
Y + ESW+K NI + R L + +NGEIL+E N A
Sbjct: 309 YNVKESWVKEYNIGAYMPKGLKQNLVRPLKIWKNASNGRAVRALCVLKNGEILLEYKNRA 368
Query: 155 LVSYNQKRKSYREIIINGLPGSFKAVPHVGTL 60
LVSY+ K+ +++I + G P F+ V HVG+L
Sbjct: 369 LVSYDPKKGKFKDIDLQGTPKWFQTVVHVGSL 400
>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
gi|222861279|gb|EEE98821.1| f-box family protein [Populus
trichocarpa]
Length = 422
Score = 158 bits (399), Expect = 3e-36
Identities = 123/391 (31%), Positives = 190/391 (48%), Gaps = 36/391 (9%)
Frame = -2
Query: 1124 QTKSMENLPAEVIQEIFSRLPITSLFENRYVCQTWHGLINDRRLSFMHYVQASRRINPTT 945
QT ME LP E+ +I SRLPITSL + + VC+ W L+ D +L + Y+ S +
Sbjct: 21 QTTGMELLPREIAHDILSRLPITSLVQFKCVCRAWRALVQDPQLVDL-YLSCSTQDTDHP 79
Query: 944 SLILYNG----PGLYYIPDFNTCQ---NVVVFNNLPFKSWLPYFKVVASQNGFICVAADG 786
LIL+ LY++ DF + V PF S +P F+VV S NG +C+ +D
Sbjct: 80 CLILHCDFPIRNNLYFV-DFAAHEEEKEKVKRIPAPFSSMMPEFEVVGSCNGLLCL-SDS 137
Query: 785 CSYRNIFICNPVIGEWFLVPRSETLYGTNY--GFGYELETNEYKIVRMRFCKDEDN---- 624
+++I NP G + +P+S GFG+ +T EYK++R+ + ++
Sbjct: 138 LYNDSLYIYNPFTGCYKELPKSLQYPDQEVVSGFGFNPKTKEYKVIRIVYYRNGHGGYPR 197
Query: 623 --------YDVEIHKLGTSTWRDIGKVK-RIIGDDPGASGVLVSGCLHWLGIVNSTNKPS 471
+V+I LG WR +GKV R++ ASG LV+G LHW+ NKP+
Sbjct: 198 SRRIIYPLSEVQILTLGCPEWRSLGKVSYRLV---RRASGALVNGRLHWIS-RPCRNKPA 253
Query: 470 --IIIVNLAEEKLSDILPVPIERCLGKIDQHFRLVDLAGRLXXXXXXXXXXVNVWVVKEY 297
++ +L +E+ + V C G ++ LV L G L + +WV+KEY
Sbjct: 254 RRLVSFDLTDEQFRE---VSKPDCGGLNRCNYHLVVLRGCLSAAVYCNYGRLEIWVMKEY 310
Query: 296 GIWESWIKHCNISXXXXXXXXXXXPKRFR------------PLLIQENGEILVEINNGAL 153
+ ESW+K NI ++ + L + +NGEIL+E N L
Sbjct: 311 NVKESWVKEYNIGAYMPKGLKQNQDRQLKIWKNSSNGRVVGALCVLKNGEILLEYKNRVL 370
Query: 152 VSYNQKRKSYREIIINGLPGSFKAVPHVGTL 60
VSY+ K +++I + G P F+ V HVG+L
Sbjct: 371 VSYDPKNGKFKDIELQGAPNWFQTVVHVGSL 401
>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
gi|147785390|emb|CAN68678.1| hypothetical protein
VITISV_041941 [Vitis vinifera]
Length = 409
Score = 154 bits (390), Expect = 3e-35
Identities = 117/387 (30%), Positives = 187/387 (48%), Gaps = 32/387 (8%)
Frame = -2
Query: 1124 QTKSMENLPAEVIQEIFSRLPITSLFENRYVCQTWHGLINDRRLSFMHYVQASRRINPTT 945
+T ME LP ++I +I SRLP+TSL + R+VC+ W + D L+ H + + + NP
Sbjct: 23 RTSFMERLPRDIILDILSRLPVTSLVQFRFVCRGWRLMAQDSLLASKHLCRTA-QYNP-- 79
Query: 944 SLILY------NGPGLYYIPDFNTCQNVVVFNNLPFKSWLPYFKVVASQNGFICVAADGC 783
LIL+ N I + +++V +PF + +P F+VV S NG +C+ AD
Sbjct: 80 CLILHCDYPIRNQISFVDISAESRDKDMVRKLTIPFWASMPEFEVVGSCNGLLCL-ADSL 138
Query: 782 SYRNIFICNPVIGEWFLVPRSETLYGTN--YGFGYELETNEYKIVRMRFCKDE------- 630
+++ NP ++ +P+S +GFGY T YK+V++ + ++
Sbjct: 139 FKDAVYVHNPFTRDFKQLPKSLQYPDQEVVFGFGYHPMTEVYKVVKVVYYRNGYGGFSRF 198
Query: 629 -----DNYDVEIHKLGTSTWRDIGKVKRIIGDDPGASGVLVSGCLHWLGIVNSTNKPSII 465
+V++ LG+ TWR +GKV + D S LV+G LHW+ I+
Sbjct: 199 RRITCSQSEVQVLTLGSPTWRSLGKVSYQL--DRWPSEALVNGRLHWVTRPRRYVTRFIV 256
Query: 464 IVNLAEEKLSDILPVPIERCLGKIDQHFRLVDLAGRLXXXXXXXXXXVNVWVVKEYGIWE 285
+LA+E+ +I P C G ++ L+ L G L + VWV+KEY + E
Sbjct: 257 SFDLADEQFREI---PKPDCGGLSRCNYHLLVLGGCLSAAVHRSNGKLEVWVMKEYDVKE 313
Query: 284 SWIKHCNI------------SXXXXXXXXXXXPKRFRPLLIQENGEILVEINNGALVSYN 141
SWIK NI + + R L + +NGEIL+E LVSYN
Sbjct: 314 SWIKEFNIGAHLPKGLKQDVNRPHRIWRNAPKGRGVRLLCLLKNGEILLEYKGRVLVSYN 373
Query: 140 QKRKSYREIIINGLPGSFKAVPHVGTL 60
+R ++++ + GLP F+ HVG+L
Sbjct: 374 PERGKFKDLTLKGLPNWFQTFVHVGSL 400
>ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cucumis sativus]
gi|449519392|ref|XP_004166719.1| PREDICTED: F-box protein
At3g07870-like [Cucumis sativus]
Length = 375
Score = 130 bits (328), Expect = 5e-28
Identities = 101/381 (26%), Positives = 180/381 (47%), Gaps = 30/381 (7%)
Frame = -2
Query: 1112 MENLPAEVIQEIFSRLPITSLFENRYVCQTWHGLINDRRLSFMHYVQASRRINPTTSLIL 933
M+NLP +V+ +I SRLPI+SL + +H + RL Y Q + ++
Sbjct: 1 MDNLPHDVLFQILSRLPISSLIQ-------FHSVSRSCRL-LAQYTQLFDPNHDHFRCLI 52
Query: 932 YNGP-----GLYYIPDFNTCQNVVVFNNL--PFKSWLPYFKVVASQNGFICVAADGCSYR 774
++ LY++ + Q+ + PF + +P + VV S NGF+C++ D
Sbjct: 53 FHSDFPIRNHLYFVDFPSLTQHKFSVKRIFTPFAATMPEYDVVGSCNGFLCLS-DSLYNE 111
Query: 773 NIFICNPVIGEWFLVPRSETLYGTN--YGFGYELETNEYKIVRMRFCKDE-------DNY 621
N+FI NP ++ +P+S+ + YG G+ +T KI+++ + K +
Sbjct: 112 NLFIYNPFTRDYLELPKSKDFSNPDVVYGIGFHPQTKRLKILKIVYSKGFRRIQRRFHHS 171
Query: 620 DVEIHKLGTSTWRDIGKVKRIIGDDPGASGVLVSGCLHWLGIVNSTNKP-SIIIVNLAEE 444
+V++ LGTS WR IG++ + G S ++G LHW+ + +I+ +LA E
Sbjct: 172 EVQVFTLGTSNWRSIGRIFHHLAQ--GQSPAAINGRLHWVSLPRRHYVGRTIVSFDLASE 229
Query: 443 KLSDILPVPIERCLGKIDQHFRLVDLAGRLXXXXXXXXXXVNVWVVKEYGIWESWIKHCN 264
+ DI P P L + + F+L++L L + +WV+++YG+ ESW+K N
Sbjct: 230 EFIDI-PKPDYGSLSRCN--FQLMNLNDCLSAVVYCSYGKMEIWVMEQYGVKESWVKSFN 286
Query: 263 ISXXXXXXXXXXXPKR-------------FRPLLIQENGEILVEINNGALVSYNQKRKSY 123
I + R + + ++GEIL+E N ALV +N +
Sbjct: 287 IGSYMPKGLKQEGTEMCFKVSKIVVKGRIVRVVCVLKSGEILLEYRNRALVVFNPSSGKF 346
Query: 122 REIIINGLPGSFKAVPHVGTL 60
+++ G+P F+ + H G+L
Sbjct: 347 KDVSFEGMPNWFQTIVHFGSL 367
>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
gi|223528011|gb|EEF30092.1| conserved hypothetical
protein [Ricinus communis]
Length = 410
Score = 124 bits (312), Expect = 4e-26
Identities = 107/387 (27%), Positives = 172/387 (44%), Gaps = 37/387 (9%)
Frame = -2
Query: 1109 ENLPAEVIQEIFSRLPITSLFENRYVCQTWHGLINDRRLSFMHYVQASRRINPTTSLILY 930
E+LP E+ +I SRLPIT L + VC+ W L+ L+ MH+ + + +P L+L
Sbjct: 24 ESLPCELALDILSRLPITHLINVKRVCRFWRSLVQHPLLASMHFSRIANNNDPCL-LLLC 82
Query: 929 NGP--GLYYIPDFNTCQNVVV--FNNLPFKSWLPYFKVVASQNGFICVAADGCSYRNIFI 762
+ P Y F+ ++ +P +P F V+ S NG + + D R +I
Sbjct: 83 DLPIKSHLYSLHFSALDETIIETVTRIPVPV-IPKFLVIGSCNGLLYL-LDSLQQRANYI 140
Query: 761 CNPVIGEWFLVPRSETLYGTN---YGFGYELETNEYKIVRMRFCKDEDNYDVEIHKL--- 600
NP ++ +P + + GFG+ T EYK+VR+ + ++ K
Sbjct: 141 YNPFTSDYLELPEPGQVLNQHRVATGFGFHSTTKEYKVVRVVYYRNNKEEGTNFQKRRYS 200
Query: 599 -------------GTSTWRDIGKVKRIIGDDPGASGVLVSGCLHWLGI-VNSTNKPSIII 462
G+ TWR G+ + +P S V+V+G LHWL + + +I
Sbjct: 201 LPRSEVQVLTVGNGSLTWRSKGETSYQLLGNP--SHVVVNGRLHWLSCRYRNQSLRRLIS 258
Query: 461 VNLAEEKLSDILPVPIERCLGKIDQHFRLVDLAGRLXXXXXXXXXXVNVWVVKEYGIWES 282
+LA+E+ ++ P P+ G+ H L L G L +WV+KEYG+ ES
Sbjct: 259 FDLADEQFREV-PCPVGASFGRHCSH--LATLRGCLSGVVQGFRRLY-IWVMKEYGVKES 314
Query: 281 WIKHCNI------------SXXXXXXXXXXXPKRFRPLLIQENGEILVEINNGALVSYNQ 138
W+K I + + + L + NGEIL+E G LV Y+
Sbjct: 315 WVKEFTIGVKLPRELEPYPNQSINLQEFHLPLSQTKVLCLLNNGEILLEFRCGTLVCYDT 374
Query: 137 KRKSYREIII-NGLPGSFKAVPHVGTL 60
K +++E+II LP A+ HVG+L
Sbjct: 375 KSGAFKELIIFQDLPEWSNAIVHVGSL 401