BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028007
         (1086 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containi...   468   e-129
emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]   468   e-129
dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]                         449   e-124
ref|XP_002318784.1| predicted protein [Populus trichocarpa] gi|2...   434   e-119
ref|XP_003534842.1| PREDICTED: pentatricopeptide repeat-containi...   431   e-118

>ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
            [Vitis vinifera]
          Length = 523

 Score =  468 bits (1204), Expect = e-129
 Identities = 212/309 (68%), Positives = 269/309 (87%)
 Frame = -3

Query: 1084 VRRDDVSVWNAMVTGLAVHGLASDVMAIYSRMKDENVLPDSITFVGILTACSHCGLVEEG 905
            ++ DDVSVWN+M+ GLA+HGLA D + ++S+M+ E+V PDSITF+GILTACSHCGLVE+G
Sbjct: 215  IQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTACSHCGLVEQG 274

Query: 904  QQFFECMKTRYLIEPQLEHYGTLIDLLGRAGRIEEAYKMIKAMPMEPDIVIWRALLSACR 725
            +++F+ M+  Y I+PQLEHYG ++DLLGRAG +EEAY MIKAMPMEPDIVIWRALLSACR
Sbjct: 275  RRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEPDIVIWRALLSACR 334

Query: 724  NRGIPNFGEVAIDKMTHPESGDYVMMSNMYSSARRWDNAEKMREVMKKNKVRKNRGLSWI 545
            N   P  GEVAI K++H  SGDY+++SNMY S  +WD+AE++RE+MK++ VRKNRG SW+
Sbjct: 335  NFKNPELGEVAIAKISHLNSGDYILLSNMYCSLEKWDSAERVREMMKRDGVRKNRGRSWV 394

Query: 544  EIGGIIHQFKAGDWSHPESETIYRLLEGLIKRTKLGGFVPAVELVFLDVSEEEKEANLSN 365
            E+GG+IHQFKAGD SHPE+  IY++LEGLI+RTKL GF+PA +LV +DVS+EE+E NL++
Sbjct: 395  ELGGVIHQFKAGDRSHPETGAIYKVLEGLIRRTKLEGFMPATDLVLMDVSDEEREENLNS 454

Query: 364  HSEKLALAYGILKTSLGTEIRISKNLRTCYDCHSWMKMVSRVLNRVIVMRDRIRFHRFES 185
            HSEKLALAY ILKTS GTEIR+SKNLRTC+DCH WMK++SR+L+RVI++RDRIRFH+FE 
Sbjct: 455  HSEKLALAYVILKTSPGTEIRVSKNLRTCHDCHCWMKILSRLLSRVIIVRDRIRFHQFEG 514

Query: 184  GSCSCNDYW 158
            G CSC DYW
Sbjct: 515  GLCSCRDYW 523


>emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
          Length = 562

 Score =  468 bits (1204), Expect = e-129
 Identities = 212/309 (68%), Positives = 269/309 (87%)
 Frame = -3

Query: 1084 VRRDDVSVWNAMVTGLAVHGLASDVMAIYSRMKDENVLPDSITFVGILTACSHCGLVEEG 905
            ++ DDVSVWN+M+ GLA+HGLA D + ++S+M+ E+V PDSITF+GILTACSHCGLVE+G
Sbjct: 254  IQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTACSHCGLVEQG 313

Query: 904  QQFFECMKTRYLIEPQLEHYGTLIDLLGRAGRIEEAYKMIKAMPMEPDIVIWRALLSACR 725
            +++F+ M+  Y I+PQLEHYG ++DLLGRAG +EEAY MIKAMPMEPDIVIWRALLSACR
Sbjct: 314  RRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEPDIVIWRALLSACR 373

Query: 724  NRGIPNFGEVAIDKMTHPESGDYVMMSNMYSSARRWDNAEKMREVMKKNKVRKNRGLSWI 545
            N   P  GEVAI K++H  SGDY+++SNMY S  +WD+AE++RE+MK++ VRKNRG SW+
Sbjct: 374  NFKNPELGEVAIAKISHLNSGDYILLSNMYCSLEKWDSAERVREMMKRDGVRKNRGRSWV 433

Query: 544  EIGGIIHQFKAGDWSHPESETIYRLLEGLIKRTKLGGFVPAVELVFLDVSEEEKEANLSN 365
            E+GG+IHQFKAGD SHPE+  IY++LEGLI+RTKL GF+PA +LV +DVS+EE+E NL++
Sbjct: 434  ELGGVIHQFKAGDRSHPETGAIYKVLEGLIRRTKLEGFMPATDLVLMDVSDEEREENLNS 493

Query: 364  HSEKLALAYGILKTSLGTEIRISKNLRTCYDCHSWMKMVSRVLNRVIVMRDRIRFHRFES 185
            HSEKLALAY ILKTS GTEIR+SKNLRTC+DCH WMK++SR+L+RVI++RDRIRFH+FE 
Sbjct: 494  HSEKLALAYVILKTSPGTEIRVSKNLRTCHDCHCWMKILSRLLSRVIIVRDRIRFHQFEG 553

Query: 184  GSCSCNDYW 158
            G CSC DYW
Sbjct: 554  GLCSCRDYW 562


>dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
          Length = 514

 Score =  449 bits (1154), Expect = e-124
 Identities = 205/309 (66%), Positives = 259/309 (83%)
 Frame = -3

Query: 1084 VRRDDVSVWNAMVTGLAVHGLASDVMAIYSRMKDENVLPDSITFVGILTACSHCGLVEEG 905
            V R+DVSVWN+++ GLAVHGLA D M ++S+M+ ENVLPDS+TF+GIL ACSHCGLV+EG
Sbjct: 206  VERNDVSVWNSLINGLAVHGLALDAMMVFSKMEAENVLPDSLTFLGILKACSHCGLVKEG 265

Query: 904  QQFFECMKTRYLIEPQLEHYGTLIDLLGRAGRIEEAYKMIKAMPMEPDIVIWRALLSACR 725
            +++F+ M+  Y I+PQLEHYG ++DLLGRAG ++EAY MI AMPMEPD+++WR LLSACR
Sbjct: 266  RKYFDLMENYYSIKPQLEHYGAMVDLLGRAGLLDEAYAMITAMPMEPDVIVWRILLSACR 325

Query: 724  NRGIPNFGEVAIDKMTHPESGDYVMMSNMYSSARRWDNAEKMREVMKKNKVRKNRGLSWI 545
                   GEVA+  ++ P+SGDYV++SN+Y S  RWDNA+++RE+MK+  VRK RG SW 
Sbjct: 326  THRNTELGEVAVANISGPKSGDYVLLSNIYCSQNRWDNAQEVREMMKEEGVRKRRGKSWF 385

Query: 544  EIGGIIHQFKAGDWSHPESETIYRLLEGLIKRTKLGGFVPAVELVFLDVSEEEKEANLSN 365
            E   ++H+F+AGD SHPE+E +Y++LEGLI+RTKL GFVP+ ELV +DVSEEEKE NL +
Sbjct: 386  EWEDVVHRFRAGDKSHPETEALYKILEGLIQRTKLEGFVPSTELVMMDVSEEEKEENLYH 445

Query: 364  HSEKLALAYGILKTSLGTEIRISKNLRTCYDCHSWMKMVSRVLNRVIVMRDRIRFHRFES 185
            HSEKLALAYGILKTS GTEIRI KNLR CYDCH+W+KMVS +L+RVI++RDRIRFHRFE 
Sbjct: 446  HSEKLALAYGILKTSPGTEIRIYKNLRICYDCHNWIKMVSGLLSRVIIIRDRIRFHRFEG 505

Query: 184  GSCSCNDYW 158
            GSCSC DYW
Sbjct: 506  GSCSCGDYW 514



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 36/131 (27%), Positives = 62/131 (47%)
 Frame = -3

Query: 1072 DVSVWNAMVTGLAVHGLASDVMAIYSRMKDENVLPDSITFVGILTACSHCGLVEEGQQFF 893
            DV  WN+M+ G   +G   + +  +  M   NV PD  TF  ++TAC+  G +   Q   
Sbjct: 109  DVVTWNSMIGGYVRNGKFEEALRSFQAMLSSNVEPDKFTFASVITACARLGALNHAQWLH 168

Query: 892  ECMKTRYLIEPQLEHYGTLIDLLGRAGRIEEAYKMIKAMPMEPDIVIWRALLSACRNRGI 713
            + M  +  IE        LID+  + GRIE A ++ +++    D+ +W +L++     G+
Sbjct: 169  DLM-VQKRIEVNFILSSALIDMYSKCGRIETAKEVFESVERN-DVSVWNSLINGLAVHGL 226

Query: 712  PNFGEVAIDKM 680
                 +   KM
Sbjct: 227  ALDAMMVFSKM 237


>ref|XP_002318784.1| predicted protein [Populus trichocarpa] gi|222859457|gb|EEE97004.1|
            predicted protein [Populus trichocarpa]
          Length = 511

 Score =  434 bits (1115), Expect = e-119
 Identities = 198/309 (64%), Positives = 256/309 (82%)
 Frame = -3

Query: 1084 VRRDDVSVWNAMVTGLAVHGLASDVMAIYSRMKDENVLPDSITFVGILTACSHCGLVEEG 905
            V+R++V +WNAM++GLAVHGLA D + ++++M+ ENVLPD+ITF+GILTACSHCGLV+EG
Sbjct: 203  VQRNNVCIWNAMISGLAVHGLALDAIKVFTKMEVENVLPDAITFLGILTACSHCGLVKEG 262

Query: 904  QQFFECMKTRYLIEPQLEHYGTLIDLLGRAGRIEEAYKMIKAMPMEPDIVIWRALLSACR 725
            +++F+ M++RY ++P +EHYG ++DLLGRAG +EEA+ MIK+MPMEPD+VIWRALL ACR
Sbjct: 263  RKYFDLMRSRYSVQPHIEHYGAMVDLLGRAGLLEEAFAMIKSMPMEPDVVIWRALLGACR 322

Query: 724  NRGIPNFGEVAIDKMTHPESGDYVMMSNMYSSARRWDNAEKMREVMKKNKVRKNRGLSWI 545
                P  GE A+  ++   SGDYV++SN+Y S +RWD A+ + E+MKK  V K RG S  
Sbjct: 323  TYKKPELGEAAMANISRLRSGDYVLLSNIYCSQKRWDTAQGVWEMMKKKGVHKVRGKSCF 382

Query: 544  EIGGIIHQFKAGDWSHPESETIYRLLEGLIKRTKLGGFVPAVELVFLDVSEEEKEANLSN 365
            E  G +H FKAGD SHPE+E IY++LEGLI+RTKL G+VP  +LV +DVSEEEKE NL +
Sbjct: 383  EWAGFLHPFKAGDRSHPETEAIYKMLEGLIQRTKLAGYVPTTDLVTMDVSEEEKEGNLYH 442

Query: 364  HSEKLALAYGILKTSLGTEIRISKNLRTCYDCHSWMKMVSRVLNRVIVMRDRIRFHRFES 185
            HSEKLALAYGILKT+ G E+RISKNLR CYDCHSW+K+VSR+L+RVI++RDRIRFHRFE+
Sbjct: 443  HSEKLALAYGILKTTSGAEVRISKNLRICYDCHSWIKIVSRLLSRVIIVRDRIRFHRFEN 502

Query: 184  GSCSCNDYW 158
            G CSC DYW
Sbjct: 503  GLCSCGDYW 511


>ref|XP_003534842.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990-like
            [Glycine max]
          Length = 569

 Score =  431 bits (1107), Expect = e-118
 Identities = 203/309 (65%), Positives = 250/309 (80%)
 Frame = -3

Query: 1084 VRRDDVSVWNAMVTGLAVHGLASDVMAIYSRMKDENVLPDSITFVGILTACSHCGLVEEG 905
            V RD VSVWNAM++GLA+HGLA D   ++SRM+ E+VLPDSITF+GILTACSHCGLVEEG
Sbjct: 261  VARDHVSVWNAMISGLAIHGLAMDATLVFSRMEMEHVLPDSITFIGILTACSHCGLVEEG 320

Query: 904  QQFFECMKTRYLIEPQLEHYGTLIDLLGRAGRIEEAYKMIKAMPMEPDIVIWRALLSACR 725
            +++F  M+ R++I+PQLEHYGT++DLLGRAG +EEAY +IK M MEPDIVIWRALLSACR
Sbjct: 321  RKYFGMMQNRFMIQPQLEHYGTMVDLLGRAGLMEEAYAVIKEMRMEPDIVIWRALLSACR 380

Query: 724  NRGIPNFGEVAIDKMTHPESGDYVMMSNMYSSARRWDNAEKMREVMKKNKVRKNRGLSWI 545
                   GEVAI  ++  ESGD+V++SNMY S   WD AE++R +MK   VRK+RG SW+
Sbjct: 381  IHRKKELGEVAIANISRLESGDFVLLSNMYCSLNNWDGAERVRRMMKTRGVRKSRGKSWV 440

Query: 544  EIGGIIHQFKAGDWSHPESETIYRLLEGLIKRTKLGGFVPAVELVFLDVSEEEKEANLSN 365
            E+G  IHQF A   SHPE ++IYR+LEGLI+R KL GF P  +LV +DVSEEEKE NL  
Sbjct: 441  ELGDGIHQFNAAYQSHPEMKSIYRVLEGLIQRAKLEGFTPLTDLVLMDVSEEEKEENLMF 500

Query: 364  HSEKLALAYGILKTSLGTEIRISKNLRTCYDCHSWMKMVSRVLNRVIVMRDRIRFHRFES 185
            HSEKLA+AY +LKTS GT+IRISKNLR C DCH+W+K+VS++LNR I++RDRIRFH+FE 
Sbjct: 501  HSEKLAMAYAVLKTSPGTKIRISKNLRICLDCHNWIKIVSKILNRKIIVRDRIRFHQFEG 560

Query: 184  GSCSCNDYW 158
            G CSC DYW
Sbjct: 561  GVCSCKDYW 569