BLASTX nr result

ID: Coptis25_contig00027950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027950
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530079.1| conserved hypothetical protein [Ricinus comm...   100   2e-19
ref|XP_002864917.1| hypothetical protein ARALYDRAFT_919795 [Arab...    95   5e-18
emb|CBI37626.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002272192.1| PREDICTED: uncharacterized protein LOC100259...    95   5e-18
ref|XP_003602534.1| Limkain-b1 [Medicago truncatula] gi|35549158...    94   9e-18

>ref|XP_002530079.1| conserved hypothetical protein [Ricinus communis]
           gi|223530432|gb|EEF32319.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 952

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/61 (75%), Positives = 50/61 (81%)
 Frame = +1

Query: 295 EQNRNVKVSVWWDFENCNVPCGVNAMKVAQRITSALRVNGIKGPVSITAFGDFIQLSRNT 474
           E++RNVKVSVWWDFENCN+P GVN  KVA  IT+ALR NGIKGPV ITAFGD  QLSR  
Sbjct: 52  EESRNVKVSVWWDFENCNLPTGVNVFKVAHAITAALRANGIKGPVQITAFGDVFQLSRAN 111

Query: 475 Q 477
           Q
Sbjct: 112 Q 112


>ref|XP_002864917.1| hypothetical protein ARALYDRAFT_919795 [Arabidopsis lyrata subsp.
           lyrata] gi|297310752|gb|EFH41176.1| hypothetical protein
           ARALYDRAFT_919795 [Arabidopsis lyrata subsp. lyrata]
          Length = 860

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 40/62 (64%), Positives = 53/62 (85%)
 Frame = +1

Query: 292 DEQNRNVKVSVWWDFENCNVPCGVNAMKVAQRITSALRVNGIKGPVSITAFGDFIQLSRN 471
           +E++R+V+V VWWDFENC++P G N  K+AQ ITSA+R++GIKGP++ITAFGD IQLSR 
Sbjct: 54  EEESRSVRVHVWWDFENCHLPSGANVFKLAQTITSAIRISGIKGPITITAFGDLIQLSRT 113

Query: 472 TQ 477
            Q
Sbjct: 114 NQ 115


>emb|CBI37626.3| unnamed protein product [Vitis vinifera]
          Length = 871

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 40/63 (63%), Positives = 52/63 (82%)
 Frame = +1

Query: 289 NDEQNRNVKVSVWWDFENCNVPCGVNAMKVAQRITSALRVNGIKGPVSITAFGDFIQLSR 468
           +++++R VKVSVWWDFENCN+P GVN  K+A  IT+A+R NGIKGP+ ITAFGD  QL+R
Sbjct: 43  HEDESRTVKVSVWWDFENCNIPAGVNVFKIAHSITAAVRANGIKGPLQITAFGDVSQLAR 102

Query: 469 NTQ 477
           + Q
Sbjct: 103 SNQ 105


>ref|XP_002272192.1| PREDICTED: uncharacterized protein LOC100259153 [Vitis vinifera]
          Length = 990

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 40/63 (63%), Positives = 52/63 (82%)
 Frame = +1

Query: 289 NDEQNRNVKVSVWWDFENCNVPCGVNAMKVAQRITSALRVNGIKGPVSITAFGDFIQLSR 468
           +++++R VKVSVWWDFENCN+P GVN  K+A  IT+A+R NGIKGP+ ITAFGD  QL+R
Sbjct: 43  HEDESRTVKVSVWWDFENCNIPAGVNVFKIAHSITAAVRANGIKGPLQITAFGDVSQLAR 102

Query: 469 NTQ 477
           + Q
Sbjct: 103 SNQ 105


>ref|XP_003602534.1| Limkain-b1 [Medicago truncatula] gi|355491582|gb|AES72785.1|
           Limkain-b1 [Medicago truncatula]
          Length = 1166

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 41/62 (66%), Positives = 52/62 (83%)
 Frame = +1

Query: 292 DEQNRNVKVSVWWDFENCNVPCGVNAMKVAQRITSALRVNGIKGPVSITAFGDFIQLSRN 471
           D+++RNV+VSVWWDFENC+VP G+N  +VA  IT A+R NGIKGPV ITAFGD +QLS++
Sbjct: 49  DDESRNVRVSVWWDFENCSVPVGLNVSRVAPSITDAVRANGIKGPVHITAFGDVMQLSKS 108

Query: 472 TQ 477
            Q
Sbjct: 109 NQ 110


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