BLASTX nr result

ID: Coptis25_contig00027841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027841
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275644.1| PREDICTED: uncharacterized protein LOC100266...    63   2e-08
emb|CBI27760.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_002871957.1| hypothetical protein ARALYDRAFT_488986 [Arab...    59   4e-07
ref|NP_197581.2| SAUR-like auxin-responsive protein [Arabidopsis...    59   5e-07
ref|NP_001031914.1| SAUR-like auxin-responsive protein [Arabidop...    59   5e-07

>ref|XP_002275644.1| PREDICTED: uncharacterized protein LOC100266455 [Vitis vinifera]
          Length = 165

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/44 (63%), Positives = 37/44 (84%)
 Frame = -1

Query: 145 LAMAEDGNPKLTGIRQIIRLKEILQKWQSVTLSPKSNSPPHQHE 14
           +AM ++G+ K+TGIRQI+RLKE LQKWQSVTLSPK N+  H ++
Sbjct: 1   MAMEDNGSNKVTGIRQIVRLKEFLQKWQSVTLSPKGNNSVHPNQ 44


>emb|CBI27760.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/42 (64%), Positives = 35/42 (83%)
 Frame = -1

Query: 139 MAEDGNPKLTGIRQIIRLKEILQKWQSVTLSPKSNSPPHQHE 14
           M ++G+ K+TGIRQI+RLKE LQKWQSVTLSPK N+  H ++
Sbjct: 1   MEDNGSNKVTGIRQIVRLKEFLQKWQSVTLSPKGNNSVHPNQ 42


>ref|XP_002871957.1| hypothetical protein ARALYDRAFT_488986 [Arabidopsis lyrata subsp.
           lyrata] gi|297317794|gb|EFH48216.1| hypothetical protein
           ARALYDRAFT_488986 [Arabidopsis lyrata subsp. lyrata]
          Length = 165

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -1

Query: 139 MAEDGNPKLTGIRQIIRLKEILQKWQSVTLSPKSNSPP 26
           M E+   KLTGIRQI+RLKEILQKWQ+VT+ PKS+ PP
Sbjct: 1   MDENNAAKLTGIRQIVRLKEILQKWQTVTIGPKSDVPP 38


>ref|NP_197581.2| SAUR-like auxin-responsive protein [Arabidopsis thaliana]
           gi|26452243|dbj|BAC43209.1| unknown protein [Arabidopsis
           thaliana] gi|28372896|gb|AAO39930.1| At5g20810
           [Arabidopsis thaliana] gi|332005508|gb|AED92891.1|
           SAUR-like auxin-responsive protein [Arabidopsis
           thaliana]
          Length = 165

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/38 (71%), Positives = 31/38 (81%)
 Frame = -1

Query: 139 MAEDGNPKLTGIRQIIRLKEILQKWQSVTLSPKSNSPP 26
           M E+   KLTGIRQI+RLKEILQKWQ+VT+ PKS  PP
Sbjct: 1   MDENNAAKLTGIRQIVRLKEILQKWQTVTIGPKSEVPP 38


>ref|NP_001031914.1| SAUR-like auxin-responsive protein [Arabidopsis thaliana]
           gi|332005509|gb|AED92892.1| SAUR-like auxin-responsive
           protein [Arabidopsis thaliana]
          Length = 190

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/38 (71%), Positives = 31/38 (81%)
 Frame = -1

Query: 139 MAEDGNPKLTGIRQIIRLKEILQKWQSVTLSPKSNSPP 26
           M E+   KLTGIRQI+RLKEILQKWQ+VT+ PKS  PP
Sbjct: 1   MDENNAAKLTGIRQIVRLKEILQKWQTVTIGPKSEVPP 38


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