BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027739
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525556.1| PREDICTED: histone deacetylase 6-like [Glyci...    73   1e-14
ref|XP_003549603.1| PREDICTED: histone deacetylase 6-like [Glyci...    72   2e-14
ref|XP_002281317.2| PREDICTED: histone deacetylase 6-like [Vitis...    69   1e-13
ref|XP_002511337.1| histone deacetylase 1, 2 ,3, putative [Ricin...    70   4e-13
ref|XP_004138094.1| PREDICTED: histone deacetylase 6-like [Cucum...    68   4e-13

>ref|XP_003525556.1| PREDICTED: histone deacetylase 6-like [Glycine max]
          Length = 476

 Score = 72.8 bits (177), Expect(2) = 1e-14
 Identities = 39/76 (51%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
 Frame = -2

Query: 344 KKSSNGRWLCGHIFSFADQFEQAKKQEST---EPTTGD*YFGKGHPMKSHRKLMAHNLIA 174
           ++SSN   +     S       AKK+  T   EPT GD Y+G+GHPMK HR  MAHNLI 
Sbjct: 5   EESSNNSSIIEGGASLPSTGSDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIV 64

Query: 173 HYSFHQFMETNCPFPA 126
           HYS H+ ME N PFPA
Sbjct: 65  HYSLHRRMEINRPFPA 80



 Score = 32.0 bits (71), Expect(2) = 1e-14
 Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = -1

Query: 102 EFFASFTPETFIITQ-SHILKRFNVGEDC 19
           +F +S +PET   +  S  LKRFNVGEDC
Sbjct: 95  DFLSSVSPETLADSAFSRHLKRFNVGEDC 123


>ref|XP_003549603.1| PREDICTED: histone deacetylase 6-like [Glycine max]
          Length = 472

 Score = 72.0 bits (175), Expect(2) = 2e-14
 Identities = 35/54 (64%), Positives = 39/54 (72%), Gaps = 3/54 (5%)
 Frame = -2

Query: 278 AKKQEST---EPTTGD*YFGKGHPMKSHRKLMAHNLIAHYSFHQFMETNCPFPA 126
           AKK+  T   EPT GD Y+G+GHPMK HR  MAHNLI HYS H+ ME N PFPA
Sbjct: 23  AKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINRPFPA 76



 Score = 32.0 bits (71), Expect(2) = 2e-14
 Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = -1

Query: 102 EFFASFTPETFIITQ-SHILKRFNVGEDC 19
           +F +S +PET   +  S  LKRFNVGEDC
Sbjct: 91  DFLSSVSPETLADSAFSRHLKRFNVGEDC 119


>ref|XP_002281317.2| PREDICTED: histone deacetylase 6-like [Vitis vinifera]
          Length = 452

 Score = 68.9 bits (167), Expect(2) = 1e-13
 Identities = 29/44 (65%), Positives = 34/44 (77%)
 Frame = -2

Query: 257 EPTTGD*YFGKGHPMKSHRKLMAHNLIAHYSFHQFMETNCPFPA 126
           EPT GD Y+G+GHPMK HR  MAHNL+ HY+ H+ ME N PFPA
Sbjct: 26  EPTIGDYYYGQGHPMKPHRIRMAHNLVVHYALHRRMEINRPFPA 69



 Score = 32.0 bits (71), Expect(2) = 1e-13
 Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -1

Query: 102 EFFASFTPETFII-TQSHILKRFNVGEDC 19
           +F AS TP++      S  LKRFNVGEDC
Sbjct: 84  DFLASVTPDSLHDHAHSRYLKRFNVGEDC 112


>ref|XP_002511337.1| histone deacetylase 1, 2 ,3, putative [Ricinus communis]
           gi|223550452|gb|EEF51939.1| histone deacetylase 1, 2 ,3,
           putative [Ricinus communis]
          Length = 468

 Score = 70.1 bits (170), Expect(2) = 4e-13
 Identities = 34/54 (62%), Positives = 39/54 (72%), Gaps = 3/54 (5%)
 Frame = -2

Query: 278 AKKQEST---EPTTGD*YFGKGHPMKSHRKLMAHNLIAHYSFHQFMETNCPFPA 126
           AKK+  T   EPT G+ Y+G+GHPMK HR  MAHNLI HYS H+ ME N PFPA
Sbjct: 17  AKKRRVTYFYEPTIGNYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINRPFPA 70



 Score = 29.3 bits (64), Expect(2) = 4e-13
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -1

Query: 102 EFFASFTPETFII-TQSHILKRFNVGEDC 19
           +F +S +PE+      +  LKRFNVGEDC
Sbjct: 85  DFLSSVSPESLADPAHNRHLKRFNVGEDC 113


>ref|XP_004138094.1| PREDICTED: histone deacetylase 6-like [Cucumis sativus]
           gi|449523768|ref|XP_004168895.1| PREDICTED: histone
           deacetylase 6-like [Cucumis sativus]
          Length = 465

 Score = 67.8 bits (164), Expect(2) = 4e-13
 Identities = 29/44 (65%), Positives = 33/44 (75%)
 Frame = -2

Query: 257 EPTTGD*YFGKGHPMKSHRKLMAHNLIAHYSFHQFMETNCPFPA 126
           EPT GD Y+G+GHPMK HR  MAHNLI HY  H+ ME N P+PA
Sbjct: 27  EPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEINRPYPA 70



 Score = 31.6 bits (70), Expect(2) = 4e-13
 Identities = 17/29 (58%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -1

Query: 102 EFFASFTPETFIITQ-SHILKRFNVGEDC 19
           +F AS +PET      S  LKRFNVGEDC
Sbjct: 85  DFLASVSPETLSDHAFSRHLKRFNVGEDC 113