BLASTX nr result

ID: Coptis25_contig00027690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027690
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40555.2| Translation elongation factor, putative [Solanum ...   121   5e-26
gb|AFK76482.1| tRNA ligase [Solanum melongena]                        112   3e-23
emb|CBI16268.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002284901.1| PREDICTED: uncharacterized protein LOC100258...   110   2e-22
emb|CAN60319.1| hypothetical protein VITISV_002853 [Vitis vinifera]   110   2e-22

>gb|AAT40555.2| Translation elongation factor, putative [Solanum demissum]
          Length = 223

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/91 (62%), Positives = 73/91 (80%)
 Frame = -3

Query: 279 KGSYSKEWVNWEKQVREVLFGHAAYLNESQVPFDFAVKEVVEQLKAAAKGVSAAPRTRKR 100
           KG+Y KEWV WEKQ+R++L G+A YLN  QVPF+FAVKEV+EQLKA A+G  AAP + KR
Sbjct: 11  KGTYVKEWVKWEKQLRDILLGNADYLNSIQVPFEFAVKEVLEQLKAIARGEYAAPSSEKR 70

Query: 99  KIGGIIFAAVTLPVTEIITHLQSLGKKNPEV 7
           K+G I+FAA++LPV EI+  L  L KK+P+V
Sbjct: 71  KLGSIVFAAISLPVPEILGLLNDLAKKDPKV 101


>gb|AFK76482.1| tRNA ligase [Solanum melongena]
          Length = 1167

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/91 (59%), Positives = 70/91 (76%)
 Frame = -3

Query: 279  KGSYSKEWVNWEKQVREVLFGHAAYLNESQVPFDFAVKEVVEQLKAAAKGVSAAPRTRKR 100
            KG+Y +EWV WEKQ+R++L G+A YLN  QVPF+FAVKEV+EQLK  A+G  A P   KR
Sbjct: 956  KGTYVQEWVKWEKQLRDILLGNADYLNSIQVPFEFAVKEVLEQLKVIARGEYAVP-AEKR 1014

Query: 99   KIGGIIFAAVTLPVTEIITHLQSLGKKNPEV 7
            K+G I+FAA++LPV EI+  L  L KK+P+V
Sbjct: 1015 KLGSIVFAAISLPVPEILGLLNDLAKKDPKV 1045


>emb|CBI16268.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/93 (55%), Positives = 71/93 (76%)
 Frame = -3

Query: 279  KGSYSKEWVNWEKQVREVLFGHAAYLNESQVPFDFAVKEVVEQLKAAAKGVSAAPRTRKR 100
            KG+Y+ EW  WEKQ+R++LF +A YL   QVPF+ +V++V+EQLK+ AKG    P T KR
Sbjct: 817  KGTYANEWSKWEKQLRDILFDNAEYLTSIQVPFESSVRQVLEQLKSIAKGDYPTPGTEKR 876

Query: 99   KIGGIIFAAVTLPVTEIITHLQSLGKKNPEVDA 1
            K G I+FAAV+LPVTEI + L +L +KNP+V+A
Sbjct: 877  KFGTIVFAAVSLPVTEIQSLLANLAEKNPKVEA 909


>ref|XP_002284901.1| PREDICTED: uncharacterized protein LOC100258617 [Vitis vinifera]
          Length = 1165

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/93 (55%), Positives = 71/93 (76%)
 Frame = -3

Query: 279  KGSYSKEWVNWEKQVREVLFGHAAYLNESQVPFDFAVKEVVEQLKAAAKGVSAAPRTRKR 100
            KG+Y+ EW  WEKQ+R++LF +A YL   QVPF+ +V++V+EQLK+ AKG    P T KR
Sbjct: 953  KGTYANEWSKWEKQLRDILFDNAEYLTSIQVPFESSVRQVLEQLKSIAKGDYPTPGTEKR 1012

Query: 99   KIGGIIFAAVTLPVTEIITHLQSLGKKNPEVDA 1
            K G I+FAAV+LPVTEI + L +L +KNP+V+A
Sbjct: 1013 KFGTIVFAAVSLPVTEIQSLLANLAEKNPKVEA 1045


>emb|CAN60319.1| hypothetical protein VITISV_002853 [Vitis vinifera]
          Length = 302

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/93 (55%), Positives = 71/93 (76%)
 Frame = -3

Query: 279 KGSYSKEWVNWEKQVREVLFGHAAYLNESQVPFDFAVKEVVEQLKAAAKGVSAAPRTRKR 100
           KG+Y+ EW  WEKQ+R++LF +A YL   QVPF+ +V++V+EQLK+ AKG    P T KR
Sbjct: 90  KGTYANEWSKWEKQLRDILFDNAEYLTSIQVPFESSVRQVLEQLKSIAKGDYPTPGTEKR 149

Query: 99  KIGGIIFAAVTLPVTEIITHLQSLGKKNPEVDA 1
           K G I+FAAV+LPVTEI + L +L +KNP+V+A
Sbjct: 150 KFGTIVFAAVSLPVTEIQSLLANLAEKNPKVEA 182


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