BLASTX nr result

ID: Coptis25_contig00027679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027679
         (1150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274426.1| PREDICTED: WD repeat domain-containing prote...   565   e-158
ref|XP_002298725.1| predicted protein [Populus trichocarpa] gi|2...   551   e-154
ref|XP_004141980.1| PREDICTED: WD repeat domain-containing prote...   549   e-154
ref|XP_003630176.1| Mitogen-activated protein kinase organizer [...   548   e-153
gb|ACJ85457.1| unknown [Medicago truncatula] gi|388501760|gb|AFK...   545   e-152

>ref|XP_002274426.1| PREDICTED: WD repeat domain-containing protein 83 [Vitis vinifera]
           gi|297743030|emb|CBI35897.3| unnamed protein product
           [Vitis vinifera]
          Length = 299

 Score =  565 bits (1455), Expect = e-158
 Identities = 261/293 (89%), Positives = 282/293 (96%)
 Frame = +2

Query: 2   LPKQEANVLRGHEGAVLATRFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKGHGREVRD 181
           LPK+EANVLRGHEGAVLA RFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYK HGREVRD
Sbjct: 6   LPKKEANVLRGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD 65

Query: 182 VHVTPDNSKLCSCGGDRQVYYWDVASGRVIRKFRGHDSEVNAVKFNEYSSVVVSAGYDRS 361
           VHV PDNSKLCSCGGDRQ++YWDV++GRVIRKFRGHDSEVNAVKFNEY+SVVVSAGYDRS
Sbjct: 66  VHVAPDNSKLCSCGGDRQLFYWDVSTGRVIRKFRGHDSEVNAVKFNEYASVVVSAGYDRS 125

Query: 362 VRAWDCRSHSTEPIQIIDTFLDSVMSICLTKHEILAGCVDGTVRTFDIRIGREISDDLGH 541
           +RAWDCRSHSTEPIQIIDTF DSVMS+CLTK EI+AG VDGTVRTFDIRIGRE+SDDLG 
Sbjct: 126 LRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIAGSVDGTVRTFDIRIGRELSDDLGQ 185

Query: 542 PVNCISLSNDGNCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITG 721
           PVNCIS+SND NC+LASCLDST+RLLDR+TGELLQEYKGHTCKS+KMDCCLTN DAH+T 
Sbjct: 186 PVNCISMSNDANCILASCLDSTLRLLDRSTGELLQEYKGHTCKSYKMDCCLTNTDAHVTS 245

Query: 722 GSEDGFIYFWDLVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 880
           GSEDGFI+FWDLVDASVVSSFRAH+SVVTSVSYHPKD+CM+T+SVD TIRVWK
Sbjct: 246 GSEDGFIFFWDLVDASVVSSFRAHASVVTSVSYHPKDDCMITASVDGTIRVWK 298


>ref|XP_002298725.1| predicted protein [Populus trichocarpa] gi|222845983|gb|EEE83530.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  551 bits (1420), Expect = e-154
 Identities = 256/293 (87%), Positives = 277/293 (94%)
 Frame = +2

Query: 2   LPKQEANVLRGHEGAVLATRFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKGHGREVRD 181
           LP +EANVL+GHEG VLA RFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYK HGREVRD
Sbjct: 7   LPNKEANVLKGHEGGVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD 66

Query: 182 VHVTPDNSKLCSCGGDRQVYYWDVASGRVIRKFRGHDSEVNAVKFNEYSSVVVSAGYDRS 361
           VHVT DNSKL SCGGDRQV+YWDVA+GRVIRKFRGH SEVNAVKFNEY+SVVVSAGYD+S
Sbjct: 67  VHVTQDNSKLVSCGGDRQVFYWDVATGRVIRKFRGHGSEVNAVKFNEYASVVVSAGYDQS 126

Query: 362 VRAWDCRSHSTEPIQIIDTFLDSVMSICLTKHEILAGCVDGTVRTFDIRIGREISDDLGH 541
           +RAWDCRSHSTEPIQIIDTF DSVMS+CLTK EI+AG VDGTVRTFDIRIGREISD+LGH
Sbjct: 127 LRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKTEIIAGSVDGTVRTFDIRIGREISDNLGH 186

Query: 542 PVNCISLSNDGNCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITG 721
           PVNCIS+SNDGNC+LASCLDST+RLLDRTTGELLQEYKGH CKS+K+DCCLTN DAH+ G
Sbjct: 187 PVNCISMSNDGNCILASCLDSTLRLLDRTTGELLQEYKGHICKSYKLDCCLTNTDAHVAG 246

Query: 722 GSEDGFIYFWDLVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 880
           GSEDG+IYFWDLVDASV+S FRAHSSVVTSVSYHP DNCMV++SVD TI+VWK
Sbjct: 247 GSEDGYIYFWDLVDASVLSRFRAHSSVVTSVSYHPTDNCMVSASVDGTIKVWK 299


>ref|XP_004141980.1| PREDICTED: WD repeat domain-containing protein 83-like [Cucumis
           sativus]
          Length = 299

 Score =  549 bits (1415), Expect = e-154
 Identities = 252/293 (86%), Positives = 276/293 (94%)
 Frame = +2

Query: 2   LPKQEANVLRGHEGAVLATRFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKGHGREVRD 181
           LP +E+NVL+GHEG VLA RFN DGNYCLSCGKDRTIRLWNPHRGIHIKTYK HGREVRD
Sbjct: 6   LPTKESNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD 65

Query: 182 VHVTPDNSKLCSCGGDRQVYYWDVASGRVIRKFRGHDSEVNAVKFNEYSSVVVSAGYDRS 361
           VHVTPDNSKLCSCGGDRQV+YWDV++GRVIRKFRGHD EVNAVKFNEY+SVVVSAGYD+S
Sbjct: 66  VHVTPDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGEVNAVKFNEYASVVVSAGYDQS 125

Query: 362 VRAWDCRSHSTEPIQIIDTFLDSVMSICLTKHEILAGCVDGTVRTFDIRIGREISDDLGH 541
           +RAWDCRSHSTEPIQIIDTF DSVMS+CLTK EI+ G VDGTVRTFD+RIGREISD+LG 
Sbjct: 126 LRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQ 185

Query: 542 PVNCISLSNDGNCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITG 721
            VNCIS+SND NC+LASCLDST+RLLDR++GELLQEYKGHTCKS+K+DCCLTN DAH+TG
Sbjct: 186 TVNCISMSNDANCILASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTG 245

Query: 722 GSEDGFIYFWDLVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 880
           GSEDGF+YFWDLVDASVVS FRAHSSVVTSVSYHPKD CM+T+SVD TIRVWK
Sbjct: 246 GSEDGFVYFWDLVDASVVSKFRAHSSVVTSVSYHPKDKCMITASVDGTIRVWK 298


>ref|XP_003630176.1| Mitogen-activated protein kinase organizer [Medicago truncatula]
           gi|355524198|gb|AET04652.1| Mitogen-activated protein
           kinase organizer [Medicago truncatula]
          Length = 306

 Score =  548 bits (1411), Expect = e-153
 Identities = 254/293 (86%), Positives = 273/293 (93%)
 Frame = +2

Query: 2   LPKQEANVLRGHEGAVLATRFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKGHGREVRD 181
           LP++E NVL+GHEG VLA RFN DGNY LSCGKDRTIRLWNPHRGIHIKTYK HGREVRD
Sbjct: 13  LPRKEVNVLKGHEGGVLAARFNSDGNYILSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD 72

Query: 182 VHVTPDNSKLCSCGGDRQVYYWDVASGRVIRKFRGHDSEVNAVKFNEYSSVVVSAGYDRS 361
           VHVT DNSKLCSCGGDRQVYYWDVA+GRVIRKFRGHD EVN VKFNEYSSVVVSAGYD+S
Sbjct: 73  VHVTTDNSKLCSCGGDRQVYYWDVATGRVIRKFRGHDGEVNGVKFNEYSSVVVSAGYDQS 132

Query: 362 VRAWDCRSHSTEPIQIIDTFLDSVMSICLTKHEILAGCVDGTVRTFDIRIGREISDDLGH 541
           +RAWDCRSHSTEPIQIIDTF DSVMS+CLTK EI+ G VDGTVRTFD+RIGREISD LG 
Sbjct: 133 LRAWDCRSHSTEPIQIIDTFADSVMSVCLTKTEIIGGSVDGTVRTFDMRIGREISDSLGQ 192

Query: 542 PVNCISLSNDGNCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITG 721
           PVNCIS+SNDGNC+LA CLDST+RLLDRTTGELLQEYKGHT KS+K+DCCLTN DAH+TG
Sbjct: 193 PVNCISMSNDGNCILAGCLDSTVRLLDRTTGELLQEYKGHTNKSYKLDCCLTNTDAHVTG 252

Query: 722 GSEDGFIYFWDLVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 880
           GSEDGF+YFWDLVDASVVS FRAH+SVVTSVSYHPK+NCM+TSSVD TIRVWK
Sbjct: 253 GSEDGFVYFWDLVDASVVSKFRAHTSVVTSVSYHPKENCMITSSVDGTIRVWK 305


>gb|ACJ85457.1| unknown [Medicago truncatula] gi|388501760|gb|AFK38946.1| unknown
           [Medicago truncatula]
          Length = 299

 Score =  545 bits (1403), Expect = e-152
 Identities = 253/293 (86%), Positives = 272/293 (92%)
 Frame = +2

Query: 2   LPKQEANVLRGHEGAVLATRFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKGHGREVRD 181
           LP++E NVL+GHEG VLA RFN DGNY LSCGKDRTIRLWNPHRGIHIKTYK HGREVRD
Sbjct: 6   LPRKEVNVLKGHEGGVLAARFNSDGNYILSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD 65

Query: 182 VHVTPDNSKLCSCGGDRQVYYWDVASGRVIRKFRGHDSEVNAVKFNEYSSVVVSAGYDRS 361
           VHVT DNSKLCSCGGDRQVYYWDVA+GRVIRKFRGHD EVN VKFNEYSSVVVSAGYD+S
Sbjct: 66  VHVTTDNSKLCSCGGDRQVYYWDVATGRVIRKFRGHDGEVNGVKFNEYSSVVVSAGYDQS 125

Query: 362 VRAWDCRSHSTEPIQIIDTFLDSVMSICLTKHEILAGCVDGTVRTFDIRIGREISDDLGH 541
           +RAWDCRSHSTEPIQIIDTF DSVMS+CLTK EI+ G VD TVRTFD+RIGREISD LG 
Sbjct: 126 LRAWDCRSHSTEPIQIIDTFADSVMSVCLTKTEIIGGSVDETVRTFDMRIGREISDSLGQ 185

Query: 542 PVNCISLSNDGNCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITG 721
           PVNCIS+SNDGNC+LA CLDST+RLLDRTTGELLQEYKGHT KS+K+DCCLTN DAH+TG
Sbjct: 186 PVNCISMSNDGNCILAGCLDSTVRLLDRTTGELLQEYKGHTNKSYKLDCCLTNTDAHVTG 245

Query: 722 GSEDGFIYFWDLVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 880
           GSEDGF+YFWDLVDASVVS FRAH+SVVTSVSYHPK+NCM+TSSVD TIRVWK
Sbjct: 246 GSEDGFVYFWDLVDASVVSKFRAHTSVVTSVSYHPKENCMITSSVDGTIRVWK 298


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