BLASTX nr result

ID: Coptis25_contig00027666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027666
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC39093.1| remorin-2 protein [Dimocarpus longan]                  172   3e-41
gb|AFB69340.1| remorin-4b, partial [Dimocarpus longan]                172   3e-41
emb|CBI35798.3| unnamed protein product [Vitis vinifera]              161   6e-38
ref|XP_002271218.1| PREDICTED: uncharacterized protein LOC100260...   161   6e-38
ref|XP_003529858.1| PREDICTED: uncharacterized protein LOC100819...   159   3e-37

>gb|AGC39093.1| remorin-2 protein [Dimocarpus longan]
          Length = 366

 Score =  172 bits (436), Expect = 3e-41
 Identities = 87/118 (73%), Positives = 96/118 (81%), Gaps = 4/118 (3%)
 Frame = -1

Query: 516 VVDTRVCAWEEEERTKSCIRYQREEARIQAWVNLQSAKAEAQSRKLEVKIQKMRSNLEEK 337
           V D+R  AWEEEE+TK C+RYQREEA+IQAWVNLQSAKAEAQSRKLEVKIQKMRSNLEEK
Sbjct: 249 VSDSRAVAWEEEEKTKCCLRYQREEAKIQAWVNLQSAKAEAQSRKLEVKIQKMRSNLEEK 308

Query: 336 LMKRMSIVHRKAEEWITAAXXXXXXXXQRATEQAHKLKSKHNS----FNSCSCFPCNN 175
           LMKRM+IVHRKAEEW  AA        Q ATEQAHK+ ++HNS     +SC CFPCNN
Sbjct: 309 LMKRMAIVHRKAEEWRAAAQQQHAEQTQSATEQAHKIVNRHNSHVTGHSSCGCFPCNN 366


>gb|AFB69340.1| remorin-4b, partial [Dimocarpus longan]
          Length = 225

 Score =  172 bits (436), Expect = 3e-41
 Identities = 87/118 (73%), Positives = 96/118 (81%), Gaps = 4/118 (3%)
 Frame = -1

Query: 516 VVDTRVCAWEEEERTKSCIRYQREEARIQAWVNLQSAKAEAQSRKLEVKIQKMRSNLEEK 337
           V D+R  AWEEEE+TK C+RYQREEA+IQAWVNLQSAKAEAQSRKLEVKIQKMRSNLEEK
Sbjct: 108 VSDSRAVAWEEEEKTKCCLRYQREEAKIQAWVNLQSAKAEAQSRKLEVKIQKMRSNLEEK 167

Query: 336 LMKRMSIVHRKAEEWITAAXXXXXXXXQRATEQAHKLKSKHNS----FNSCSCFPCNN 175
           LMKRM+IVHRKAEEW  AA        Q ATEQAHK+ ++HNS     +SC CFPCNN
Sbjct: 168 LMKRMAIVHRKAEEWRAAAQQQHAEQTQSATEQAHKIVNRHNSHVTGHSSCGCFPCNN 225


>emb|CBI35798.3| unnamed protein product [Vitis vinifera]
          Length = 456

 Score =  161 bits (407), Expect = 6e-38
 Identities = 79/118 (66%), Positives = 93/118 (78%), Gaps = 4/118 (3%)
 Frame = -1

Query: 516 VVDTRVCAWEEEERTKSCIRYQREEARIQAWVNLQSAKAEAQSRKLEVKIQKMRSNLEEK 337
           + + +  +WEEEE+TK C+RYQREEA+IQAWVNLQ AKAEAQSRKLEVKIQKMRSNLEEK
Sbjct: 336 ISEAKSASWEEEEKTKCCLRYQREEAKIQAWVNLQKAKAEAQSRKLEVKIQKMRSNLEEK 395

Query: 336 LMKRMSIVHRKAEEWITAAXXXXXXXXQRATEQAHKLKSKHNS----FNSCSCFPCNN 175
           LMKRM++VHRKAEEW  +A        QRA EQA K+ ++HNS     +SC CFPCNN
Sbjct: 396 LMKRMAVVHRKAEEWRASAQVQHSEQIQRAAEQAQKMLNQHNSNFSAHSSCGCFPCNN 453


>ref|XP_002271218.1| PREDICTED: uncharacterized protein LOC100260045 [Vitis vinifera]
          Length = 481

 Score =  161 bits (407), Expect = 6e-38
 Identities = 79/118 (66%), Positives = 93/118 (78%), Gaps = 4/118 (3%)
 Frame = -1

Query: 516 VVDTRVCAWEEEERTKSCIRYQREEARIQAWVNLQSAKAEAQSRKLEVKIQKMRSNLEEK 337
           + + +  +WEEEE+TK C+RYQREEA+IQAWVNLQ AKAEAQSRKLEVKIQKMRSNLEEK
Sbjct: 361 ISEAKSASWEEEEKTKCCLRYQREEAKIQAWVNLQKAKAEAQSRKLEVKIQKMRSNLEEK 420

Query: 336 LMKRMSIVHRKAEEWITAAXXXXXXXXQRATEQAHKLKSKHNS----FNSCSCFPCNN 175
           LMKRM++VHRKAEEW  +A        QRA EQA K+ ++HNS     +SC CFPCNN
Sbjct: 421 LMKRMAVVHRKAEEWRASAQVQHSEQIQRAAEQAQKMLNQHNSNFSAHSSCGCFPCNN 478


>ref|XP_003529858.1| PREDICTED: uncharacterized protein LOC100819894 [Glycine max]
          Length = 469

 Score =  159 bits (401), Expect = 3e-37
 Identities = 79/117 (67%), Positives = 91/117 (77%), Gaps = 4/117 (3%)
 Frame = -1

Query: 510 DTRVCAWEEEERTKSCIRYQREEARIQAWVNLQSAKAEAQSRKLEVKIQKMRSNLEEKLM 331
           D    AWEEEE+TK C+RYQREEA+IQAWVNLQ+AKAEA+SRKLEVKIQKM+S+LEEKLM
Sbjct: 351 DCIAAAWEEEEKTKCCLRYQREEAKIQAWVNLQNAKAEARSRKLEVKIQKMKSSLEEKLM 410

Query: 330 KRMSIVHRKAEEWITAAXXXXXXXXQRATEQAHKLKSKHNSF----NSCSCFPCNNH 172
           KRMS+VHRKAEEW   A         +ATEQA K+  KHNS     +SC CFPCNN+
Sbjct: 411 KRMSVVHRKAEEWRAEARQQHLEQIHKATEQAQKMIHKHNSQFSRPSSCGCFPCNNN 467


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