BLASTX nr result

ID: Coptis25_contig00027654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027654
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20214.3| unnamed protein product [Vitis vinifera]              228   4e-58
ref|XP_002283012.1| PREDICTED: tRNA dimethylallyltransferase 9 [...   228   4e-58
ref|XP_003543220.1| PREDICTED: tRNA dimethylallyltransferase 9-l...   222   2e-56
ref|XP_002524264.1| ATP binding protein, putative [Ricinus commu...   217   9e-55
ref|XP_002300421.1| tRNA isopentenyltransferase [Populus trichoc...   217   9e-55

>emb|CBI20214.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  228 bits (581), Expect = 4e-58
 Identities = 115/160 (71%), Positives = 132/160 (82%)
 Frame = -2

Query: 482 IIAGGTGLYLRWYIYGKPEVPKASPEIASEVHSELIDLQRNGDWDAAVALVVKAGDPKAH 303
           I+AGGTGLYLRW+IYGKP+VPKAS EIASEV+SEL+DLQRNGDWDAAV LVVKAGD KA 
Sbjct: 126 IVAGGTGLYLRWFIYGKPDVPKASREIASEVYSELMDLQRNGDWDAAVQLVVKAGDSKAQ 185

Query: 302 HVALNDWYRLKRSLEIIKSSGSPPSAFQVPYESFRDQLDFEGAVNSLDVTFSGNKHEEKL 123
            +A NDWYRL+RSLEIIKSSGSPPSAF VPY+SFR+Q       +S DV  S +  +E  
Sbjct: 186 SLAANDWYRLRRSLEIIKSSGSPPSAFHVPYDSFREQP--SSVDHSHDVNSSSDGSKENK 243

Query: 122 SKELDYDFKCFFLSSRRTDLYRLIDERCESMLLGGEGILS 3
           SKELD++F CFFLSS+R +LYR ID RCE MLLG +GILS
Sbjct: 244 SKELDFEFICFFLSSQRLELYRSIDLRCEDMLLGSDGILS 283


>ref|XP_002283012.1| PREDICTED: tRNA dimethylallyltransferase 9 [Vitis vinifera]
          Length = 447

 Score =  228 bits (581), Expect = 4e-58
 Identities = 115/160 (71%), Positives = 132/160 (82%)
 Frame = -2

Query: 482 IIAGGTGLYLRWYIYGKPEVPKASPEIASEVHSELIDLQRNGDWDAAVALVVKAGDPKAH 303
           I+AGGTGLYLRW+IYGKP+VPKAS EIASEV+SEL+DLQRNGDWDAAV LVVKAGD KA 
Sbjct: 141 IVAGGTGLYLRWFIYGKPDVPKASREIASEVYSELMDLQRNGDWDAAVQLVVKAGDSKAQ 200

Query: 302 HVALNDWYRLKRSLEIIKSSGSPPSAFQVPYESFRDQLDFEGAVNSLDVTFSGNKHEEKL 123
            +A NDWYRL+RSLEIIKSSGSPPSAF VPY+SFR+Q       +S DV  S +  +E  
Sbjct: 201 SLAANDWYRLRRSLEIIKSSGSPPSAFHVPYDSFREQP--SSVDHSHDVNSSSDGSKENK 258

Query: 122 SKELDYDFKCFFLSSRRTDLYRLIDERCESMLLGGEGILS 3
           SKELD++F CFFLSS+R +LYR ID RCE MLLG +GILS
Sbjct: 259 SKELDFEFICFFLSSQRLELYRSIDLRCEDMLLGSDGILS 298


>ref|XP_003543220.1| PREDICTED: tRNA dimethylallyltransferase 9-like [Glycine max]
          Length = 448

 Score =  222 bits (566), Expect = 2e-56
 Identities = 110/162 (67%), Positives = 129/162 (79%), Gaps = 2/162 (1%)
 Frame = -2

Query: 482 IIAGGTGLYLRWYIYGKPEVPKASPEIASEVHSELIDLQRNGDWDAAVALVVKAGDPKAH 303
           I+ GGTGLYLRW+IYGKP+VPKASPEI SE + EL +LQRN DWD AV LVVKAGDPKA 
Sbjct: 138 IVVGGTGLYLRWFIYGKPDVPKASPEIVSEAYQELAELQRNDDWDTAVQLVVKAGDPKAQ 197

Query: 302 HVALNDWYRLKRSLEIIKSSGSPPSAFQVPYESFRDQLDFEGAVNS--LDVTFSGNKHEE 129
            +A+NDWYRL+RSLEIIKSSGSPPSAF+VPY+SFR+Q ++  A  S   D+   G+  E+
Sbjct: 198 FLAVNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFREQGEYGVADGSELSDMNTYGDAMEK 257

Query: 128 KLSKELDYDFKCFFLSSRRTDLYRLIDERCESMLLGGEGILS 3
             S ELDY+F CFFLSS R DLY+ ID RCE MLLG +GILS
Sbjct: 258 TNSSELDYEFMCFFLSSHRLDLYKSIDYRCEDMLLGRDGILS 299


>ref|XP_002524264.1| ATP binding protein, putative [Ricinus communis]
           gi|223536455|gb|EEF38103.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 446

 Score =  217 bits (552), Expect = 9e-55
 Identities = 104/160 (65%), Positives = 127/160 (79%)
 Frame = -2

Query: 482 IIAGGTGLYLRWYIYGKPEVPKASPEIASEVHSELIDLQRNGDWDAAVALVVKAGDPKAH 303
           I+AGGTGLYLRW++YGKP+VPKASPEIAS+V+SEL +LQ N DWDAAV LVV AGDP+A 
Sbjct: 134 IVAGGTGLYLRWFVYGKPDVPKASPEIASQVYSELAELQENQDWDAAVQLVVNAGDPRAQ 193

Query: 302 HVALNDWYRLKRSLEIIKSSGSPPSAFQVPYESFRDQLDFEGAVNSLDVTFSGNKHEEKL 123
            +  NDWYRL+RSLEIIK++GSPPS+FQVPY+ F++QL      +SL+   +G+   +  
Sbjct: 194 SLPANDWYRLRRSLEIIKATGSPPSSFQVPYDFFKEQLGTRLTESSLNANLAGDVSAKVK 253

Query: 122 SKELDYDFKCFFLSSRRTDLYRLIDERCESMLLGGEGILS 3
            K+LDYDF CFFLSS R DLYR ID RCE ML G +GILS
Sbjct: 254 PKDLDYDFICFFLSSPRLDLYRSIDYRCEDMLSGTDGILS 293


>ref|XP_002300421.1| tRNA isopentenyltransferase [Populus trichocarpa]
           gi|222847679|gb|EEE85226.1| tRNA isopentenyltransferase
           [Populus trichocarpa]
          Length = 443

 Score =  217 bits (552), Expect = 9e-55
 Identities = 108/160 (67%), Positives = 126/160 (78%)
 Frame = -2

Query: 482 IIAGGTGLYLRWYIYGKPEVPKASPEIASEVHSELIDLQRNGDWDAAVALVVKAGDPKAH 303
           I+ GGTGLYLRW+IYGKP+VPKASPEIASEV+SEL +L+RN DWDAAV LVVKAGD +A 
Sbjct: 138 IVTGGTGLYLRWFIYGKPDVPKASPEIASEVYSELAELERNKDWDAAVQLVVKAGDSQAQ 197

Query: 302 HVALNDWYRLKRSLEIIKSSGSPPSAFQVPYESFRDQLDFEGAVNSLDVTFSGNKHEEKL 123
            +A NDWYRL+RSLEIIK+SGSPPSAFQVPY+SF+DQ D     +SLDV  SG       
Sbjct: 198 FLAANDWYRLRRSLEIIKTSGSPPSAFQVPYKSFKDQFDTRLTDSSLDVNSSG------- 250

Query: 122 SKELDYDFKCFFLSSRRTDLYRLIDERCESMLLGGEGILS 3
             +LDY+F CFFLSS R DLY+ ID RCE M+ G  GIL+
Sbjct: 251 --DLDYEFICFFLSSPRLDLYKSIDYRCEDMVAGSNGILT 288


Top