BLASTX nr result

ID: Coptis25_contig00027629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027629
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518058.1| conserved hypothetical protein [Ricinus comm...   115   4e-24
ref|XP_002270714.2| PREDICTED: uncharacterized protein LOC100258...   113   1e-23
emb|CBI17221.3| unnamed protein product [Vitis vinifera]              113   1e-23
ref|XP_004157719.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin ca...   109   3e-22
ref|XP_004134375.1| PREDICTED: uncharacterized protein LOC101204...   109   3e-22

>ref|XP_002518058.1| conserved hypothetical protein [Ricinus communis]
            gi|223542654|gb|EEF44191.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2833

 Score =  115 bits (288), Expect = 4e-24
 Identities = 57/104 (54%), Positives = 69/104 (66%)
 Frame = -1

Query: 316  GKLLSTNEVYWHDPTGSVDLTKEMLLQCGSLDETNYSLSKTISHVYEGLHDFFVTECKVC 137
            G  LS+ +VYWHDP GSVD  KE+  + G        +SKT+  +Y GLHDFFV EC V 
Sbjct: 2187 GVFLSSEDVYWHDPIGSVDRMKEIHPRYGLAGLPKQPVSKTLCDIYTGLHDFFVKECGVR 2246

Query: 136  EIPPSQCYMQILAQMSKVALPSQAASVVLRVLMKWANDLKSGLL 5
            EIP   CY  IL Q+S VALPSQAA  VL+V +KW ++LKSG L
Sbjct: 2247 EIPSCGCYFDILKQLSTVALPSQAAGTVLQVFLKWTDELKSGFL 2290


>ref|XP_002270714.2| PREDICTED: uncharacterized protein LOC100258878 [Vitis vinifera]
          Length = 1578

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/104 (54%), Positives = 69/104 (66%)
 Frame = -1

Query: 316  GKLLSTNEVYWHDPTGSVDLTKEMLLQCGSLDETNYSLSKTISHVYEGLHDFFVTECKVC 137
            G LLS  +VYWHD TGSVD  KE+L QC S+   ++ LSK + +VY G HDFFV  C V 
Sbjct: 933  GMLLSVEDVYWHDSTGSVDRMKEILPQCDSVGVVDHPLSKMLCNVYPGHHDFFVNGCGVH 992

Query: 136  EIPPSQCYMQILAQMSKVALPSQAASVVLRVLMKWANDLKSGLL 5
            E P    Y++IL Q+S VALPSQAA+ V RV +KW   LKS  L
Sbjct: 993  ESPSLHSYIEILVQLSAVALPSQAANAVFRVFLKWTEGLKSKTL 1036


>emb|CBI17221.3| unnamed protein product [Vitis vinifera]
          Length = 2388

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/104 (54%), Positives = 69/104 (66%)
 Frame = -1

Query: 316  GKLLSTNEVYWHDPTGSVDLTKEMLLQCGSLDETNYSLSKTISHVYEGLHDFFVTECKVC 137
            G LLS  +VYWHD TGSVD  KE+L QC S+   ++ LSK + +VY G HDFFV  C V 
Sbjct: 1775 GMLLSVEDVYWHDSTGSVDRMKEILPQCDSVGVVDHPLSKMLCNVYPGHHDFFVNGCGVH 1834

Query: 136  EIPPSQCYMQILAQMSKVALPSQAASVVLRVLMKWANDLKSGLL 5
            E P    Y++IL Q+S VALPSQAA+ V RV +KW   LKS  L
Sbjct: 1835 ESPSLHSYIEILVQLSAVALPSQAANAVFRVFLKWTEGLKSKTL 1878


>ref|XP_004157719.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase
            2-like [Cucumis sativus]
          Length = 1225

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/104 (50%), Positives = 68/104 (65%)
 Frame = -1

Query: 316  GKLLSTNEVYWHDPTGSVDLTKEMLLQCGSLDETNYSLSKTISHVYEGLHDFFVTECKVC 137
            G  LS  EVYWHDP  S+D  K+M LQC      +  + KT+ ++Y GL  FF++EC V 
Sbjct: 950  GIFLSPKEVYWHDPIVSIDEIKDMHLQCSLTKMVDSPIIKTLCNIYPGLKKFFISECGVH 1009

Query: 136  EIPPSQCYMQILAQMSKVALPSQAASVVLRVLMKWANDLKSGLL 5
            E PP + Y+Q L Q+S VALPSQA  +V  V +KWAN L+SGLL
Sbjct: 1010 EYPPLRSYLQFLKQLSAVALPSQANDMVFEVFLKWANGLESGLL 1053


>ref|XP_004134375.1| PREDICTED: uncharacterized protein LOC101204025 [Cucumis sativus]
          Length = 2724

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/104 (50%), Positives = 68/104 (65%)
 Frame = -1

Query: 316  GKLLSTNEVYWHDPTGSVDLTKEMLLQCGSLDETNYSLSKTISHVYEGLHDFFVTECKVC 137
            G  LS  EVYWHDP  S+D  K+M LQC      +  + KT+ ++Y GL  FF++EC V 
Sbjct: 2092 GIFLSPKEVYWHDPIVSIDEIKDMHLQCSLTKMVDSPIIKTLCNIYPGLKKFFISECGVH 2151

Query: 136  EIPPSQCYMQILAQMSKVALPSQAASVVLRVLMKWANDLKSGLL 5
            E PP + Y+Q L Q+S VALPSQA  +V  V +KWAN L+SGLL
Sbjct: 2152 EYPPLRSYLQFLKQLSAVALPSQANDMVFEVFLKWANGLESGLL 2195


Top