BLASTX nr result

ID: Coptis25_contig00027615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027615
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533431.1| PREDICTED: ABC transporter G family member 6...    81   1e-13
ref|XP_002527217.1| ATP-binding cassette transporter, putative [...    81   1e-13
ref|XP_002310338.1| white-brown-complex ABC transporter family [...    80   1e-13
ref|XP_003612949.1| ABC transporter G family member [Medicago tr...    80   2e-13
emb|CAN62797.1| hypothetical protein VITISV_026840 [Vitis vinifera]    79   5e-13

>ref|XP_003533431.1| PREDICTED: ABC transporter G family member 6-like [Glycine max]
          Length = 729

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/49 (73%), Positives = 44/49 (89%)
 Frame = +1

Query: 4   SFFIFTVCLFFFSSNDVVPAFIQERYIFVHESSHNAYRASS*TFSRVVS 150
           SFFIFTVCLFFFSSND VPAFIQER+IF+ E+SHNAYRAS+ T + +++
Sbjct: 510 SFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASTYTIAGIIT 558


>ref|XP_002527217.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223533393|gb|EEF35143.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 724

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = +1

Query: 4   SFFIFTVCLFFFSSNDVVPAFIQERYIFVHESSHNAYRASS*TFSRVVS 150
           SFFIFTVCLFFFSSND VPAFIQER+IFV E+SHNAYRASS T + +++
Sbjct: 506 SFFIFTVCLFFFSSNDAVPAFIQERFIFVRETSHNAYRASSYTIAGLLT 554


>ref|XP_002310338.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222853241|gb|EEE90788.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 732

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/49 (75%), Positives = 44/49 (89%)
 Frame = +1

Query: 4   SFFIFTVCLFFFSSNDVVPAFIQERYIFVHESSHNAYRASS*TFSRVVS 150
           SFFIFTVCLFFFSSND VPAFIQER+IFV E+SHN+YRASS T + +++
Sbjct: 514 SFFIFTVCLFFFSSNDAVPAFIQERFIFVRETSHNSYRASSYTIAGLIT 562


>ref|XP_003612949.1| ABC transporter G family member [Medicago truncatula]
           gi|163889368|gb|ABY48138.1| ABC transporter [Medicago
           truncatula] gi|258518205|gb|ACV73543.1| STR2 [Medicago
           truncatula] gi|258518207|gb|ACV73544.1| STR2 [Medicago
           truncatula] gi|355514284|gb|AES95907.1| ABC transporter
           G family member [Medicago truncatula]
          Length = 727

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/49 (73%), Positives = 43/49 (87%)
 Frame = +1

Query: 4   SFFIFTVCLFFFSSNDVVPAFIQERYIFVHESSHNAYRASS*TFSRVVS 150
           SFFIFTVCLFFFSSND VPAFIQER+IF+ E+SHNAYRAS  T + +++
Sbjct: 510 SFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASCYTIASLIT 558


>emb|CAN62797.1| hypothetical protein VITISV_026840 [Vitis vinifera]
          Length = 725

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/49 (73%), Positives = 43/49 (87%)
 Frame = +1

Query: 4   SFFIFTVCLFFFSSNDVVPAFIQERYIFVHESSHNAYRASS*TFSRVVS 150
           SFFIFTVCLFFFSSND VPAFIQER+IFV E+ HNAYRAS+ T + +++
Sbjct: 507 SFFIFTVCLFFFSSNDAVPAFIQERFIFVRETGHNAYRASTYTXAGLIT 555


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