BLASTX nr result

ID: Coptis25_contig00027609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027609
         (1310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514872.1| conserved hypothetical protein [Ricinus comm...    76   2e-11
ref|XP_002274725.2| PREDICTED: uncharacterized protein LOC100256...    69   3e-09
emb|CBI21322.3| unnamed protein product [Vitis vinifera]               69   3e-09
ref|XP_003548514.1| PREDICTED: uncharacterized protein LOC100810...    68   6e-09
ref|XP_003553953.1| PREDICTED: uncharacterized protein LOC100802...    66   2e-08

>ref|XP_002514872.1| conserved hypothetical protein [Ricinus communis]
            gi|223545923|gb|EEF47426.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1590

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 39/71 (54%), Positives = 50/71 (70%)
 Frame = -3

Query: 222  SLVDTLKSYS*RTVLPESDSSIGGLESSDSTEWGRSGIKKGDKGKQTDQALLGFKVSRNG 43
            S +D LKS + +T  PE   +  G ESS+ T+ GRSG KKG KG+Q D ALLGFKV+ N 
Sbjct: 1520 SFIDMLKSNAKKTTAPEVHMTTAGSESSEGTQGGRSGKKKGKKGRQIDPALLGFKVTSNR 1579

Query: 42   IVMVEIQRLEE 10
            I+M EIQR+E+
Sbjct: 1580 IMMGEIQRIED 1590


>ref|XP_002274725.2| PREDICTED: uncharacterized protein LOC100256726 [Vitis vinifera]
          Length = 241

 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 43/74 (58%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
 Frame = -3

Query: 225 TSLVDTLKSYS*RTVLPESDSSIGG-LESSD-STEWGRSGIKKGDKGKQTDQALLGFKVS 52
           TS +D LK       +PE+D++ G  LESSD S + GRSG KKG KG+Q D ALLGFKVS
Sbjct: 173 TSFIDMLKK-----PVPEADATNGAALESSDCSVQSGRSGKKKGKKGRQLDPALLGFKVS 227

Query: 51  RNGIVMVEIQRLEE 10
            N I+M EIQRLE+
Sbjct: 228 SNRILMGEIQRLED 241


>emb|CBI21322.3| unnamed protein product [Vitis vinifera]
          Length = 1665

 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 43/74 (58%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
 Frame = -3

Query: 225  TSLVDTLKSYS*RTVLPESDSSIGG-LESSD-STEWGRSGIKKGDKGKQTDQALLGFKVS 52
            TS +D LK       +PE+D++ G  LESSD S + GRSG KKG KG+Q D ALLGFKVS
Sbjct: 1597 TSFIDMLKK-----PVPEADATNGAALESSDCSVQSGRSGKKKGKKGRQLDPALLGFKVS 1651

Query: 51   RNGIVMVEIQRLEE 10
             N I+M EIQRLE+
Sbjct: 1652 SNRILMGEIQRLED 1665



 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 3/201 (1%)
 Frame = -2

Query: 1267 EGRQSSNLGNSLQNRFVKADINHHSNSLESSDRLFNRSHSGPPTEEQFSLGLKEAAQALY 1088
            EG  +SN  N  QN  +    N   N+LE+ +R   RS+SG   E+       E +Q  +
Sbjct: 1355 EGSPNSNSSNLRQNHLLNVYANEQFNNLENRERFPLRSNSGALGEQPLFSSTLETSQIGF 1414

Query: 1087 RNADIIGTSSVRTE--SRDRNQGVRGGFESWALRDKQLLEIQGRVAEQSGIDAKKRLQIP 914
             ++  IG SS+  E    +  +G + G +S     + + EI+G +AEQ+  DA    ++ 
Sbjct: 1415 VDSSSIGNSSMGKEFSELEGKKGKKRGSKSRTEMSRSVSEIEGNLAEQAE-DAMDHGELL 1473

Query: 913  AITPIRHDKLGITDENIGFCDYNMGMDNRSGKDMAKVRVSLIPLKGFDDSSLPLWDTSSP 734
                 RH  +     N G  ++++G+D     D++  R+S I     D+S L        
Sbjct: 1474 VNAHSRHTSVSNAGGNAGLYNHDIGLDKACQDDVSNDRLSSIVSNELDNSMLK------- 1526

Query: 733  LREPLSE-LDSNTTSERKSAP 674
             R P+S  L S+   E   AP
Sbjct: 1527 -RPPVSRVLSSDVLLEAAPAP 1546


>ref|XP_003548514.1| PREDICTED: uncharacterized protein LOC100810477 [Glycine max]
          Length = 1616

 Score = 67.8 bits (164), Expect = 6e-09
 Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
 Frame = -3

Query: 225  TSLVDTLKSYS*RTVLPESDSSIG-GLESSDSTEWGRSGIKKGDKGKQTDQALLGFKVSR 49
            TS +D LK      V+ +S ++ G G ESSD+ + GRSG KKG KGKQ D +LLGFKVS 
Sbjct: 1544 TSFIDMLKKPVLPEVVVDSHAASGIGSESSDAAQAGRSGKKKGKKGKQIDPSLLGFKVSS 1603

Query: 48   NGIVMVEIQRLEE 10
            N I+M EIQR E+
Sbjct: 1604 NRIMMGEIQRPED 1616


>ref|XP_003553953.1| PREDICTED: uncharacterized protein LOC100802910 [Glycine max]
          Length = 296

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
 Frame = -3

Query: 225 TSLVDTLKSYS*RTVLPESDSSIG-GLESSDSTEWGRSGIKKGDKGKQTDQALLGFKVSR 49
           TS +D LK      V+ +S ++ G G ES D+ + GRSG KKG KGKQ D +LLGFKVS 
Sbjct: 224 TSFIDMLKKPVLPEVVADSHAASGIGTESLDAAQAGRSGKKKGKKGKQIDPSLLGFKVSS 283

Query: 48  NGIVMVEIQRLEE 10
           N I+M EIQR E+
Sbjct: 284 NRIMMGEIQRPED 296


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