BLASTX nr result

ID: Coptis25_contig00027532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027532
         (913 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27453.3| unnamed protein product [Vitis vinifera]              244   2e-62
ref|XP_003631309.1| PREDICTED: uncharacterized protein LOC100854...   242   8e-62
ref|XP_002310662.1| predicted protein [Populus trichocarpa] gi|2...   231   2e-58
ref|XP_002520910.1| electron transporter, putative [Ricinus comm...   223   6e-56
ref|XP_003538969.1| PREDICTED: uncharacterized protein LOC100814...   208   2e-51

>emb|CBI27453.3| unnamed protein product [Vitis vinifera]
          Length = 1106

 Score =  244 bits (623), Expect = 2e-62
 Identities = 136/302 (45%), Positives = 196/302 (64%), Gaps = 4/302 (1%)
 Frame = +3

Query: 3    GSNNEKLTCGAESGLGEIPCVGGFTSANQSATS-ETEYTLPGAGMSCTFDEFQKFEAFFS 179
            G  NEKL CG E+G  +IP +G F+  N S    ETE   PG  +SCT +EF++F+ F S
Sbjct: 219  GMQNEKLNCGIENGFNDIPWLGDFSRVNDSDPYLETENITPGVKLSCTIEEFKQFDFFLS 278

Query: 180  EFMTLSREFFLPPERQSFGLVTERFLLTSLEARDHDSWVMVIHVAGCPNCSKVLKDGNDF 359
            +FMT++ EFFLP ERQ FGLV+ R LL+SL+  D  SW  +++ AGCP+CSK+LK+G+D 
Sbjct: 279  KFMTVAGEFFLPLERQRFGLVSNRSLLSSLDIGDSGSWFAMVYFAGCPSCSKILKEGDDL 338

Query: 360  RSALHMHHSPVTELEREGNDADFTLSANKPSMILFVDRSSESLITKRKSQAALQVFRKFA 539
            RS L   +S V E+E +G+D + TL +++PS++LFVDRSS+S   +RKS+AAL  FR+ A
Sbjct: 339  RSVLQTQNSLVAEMEDDGHDTEPTLPSSEPSVVLFVDRSSDSSRIRRKSKAALNAFRELA 398

Query: 540  LDNHVSIQTDLKETVTLSKFSAQAF--PGKKGGSASDQSKHPRRH-STLTRVGSLKNKVS 710
            LD  +S Q   +      K S Q +   G K G       HP+   S  ++    K+K+S
Sbjct: 399  LDYQISFQMGGQSDNKPDKPSLQVYHASGSKFG-------HPKLSVSPTSQEMKAKDKIS 451

Query: 711  VMVINEGEKIVLNELSADAQGRSIHDIXXXXXXXXXXXXXSSVAKEVGFRLLSDDFEVKL 890
            VMVIN+G++  L+ +++D QG S+++I             SS+AKEVGF+LLSDDF+V++
Sbjct: 452  VMVINKGKR--LDSITSDLQGSSLNEILGYLLQHKKKAKLSSLAKEVGFQLLSDDFDVQI 509

Query: 891  AE 896
            A+
Sbjct: 510  AD 511


>ref|XP_003631309.1| PREDICTED: uncharacterized protein LOC100854034 [Vitis vinifera]
          Length = 588

 Score =  242 bits (618), Expect = 8e-62
 Identities = 135/299 (45%), Positives = 195/299 (65%), Gaps = 4/299 (1%)
 Frame = +3

Query: 12  NEKLTCGAESGLGEIPCVGGFTSANQSATS-ETEYTLPGAGMSCTFDEFQKFEAFFSEFM 188
           NEKL CG E+G  +IP +G F+  N S    ETE   PG  +SCT +EF++F+ F S+FM
Sbjct: 3   NEKLNCGIENGFNDIPWLGDFSRVNDSDPYLETENITPGVKLSCTIEEFKQFDFFLSKFM 62

Query: 189 TLSREFFLPPERQSFGLVTERFLLTSLEARDHDSWVMVIHVAGCPNCSKVLKDGNDFRSA 368
           T++ EFFLP ERQ FGLV+ R LL+SL+  D  SW  +++ AGCP+CSK+LK+G+D RS 
Sbjct: 63  TVAGEFFLPLERQRFGLVSNRSLLSSLDIGDSGSWFAMVYFAGCPSCSKILKEGDDLRSV 122

Query: 369 LHMHHSPVTELEREGNDADFTLSANKPSMILFVDRSSESLITKRKSQAALQVFRKFALDN 548
           L   +S V E+E +G+D + TL +++PS++LFVDRSS+S   +RKS+AAL  FR+ ALD 
Sbjct: 123 LQTQNSLVAEMEDDGHDTEPTLPSSEPSVVLFVDRSSDSSRIRRKSKAALNAFRELALDY 182

Query: 549 HVSIQTDLKETVTLSKFSAQAF--PGKKGGSASDQSKHPRRH-STLTRVGSLKNKVSVMV 719
            +S Q   +      K S Q +   G K G       HP+   S  ++    K+K+SVMV
Sbjct: 183 QISFQMGGQSDNKPDKPSLQVYHASGSKFG-------HPKLSVSPTSQEMKAKDKISVMV 235

Query: 720 INEGEKIVLNELSADAQGRSIHDIXXXXXXXXXXXXXSSVAKEVGFRLLSDDFEVKLAE 896
           IN+G++  L+ +++D QG S+++I             SS+AKEVGF+LLSDDF+V++A+
Sbjct: 236 INKGKR--LDSITSDLQGSSLNEILGYLLQHKKKAKLSSLAKEVGFQLLSDDFDVQIAD 292


>ref|XP_002310662.1| predicted protein [Populus trichocarpa] gi|222853565|gb|EEE91112.1|
            predicted protein [Populus trichocarpa]
          Length = 1080

 Score =  231 bits (588), Expect = 2e-58
 Identities = 126/305 (41%), Positives = 184/305 (60%), Gaps = 6/305 (1%)
 Frame = +3

Query: 6    SNNEKLTCGAESGLGEIPCVGGFTSANQSAT-----SETEYTLPGAGMSCTFDEFQKFEA 170
            + N ++ CG E+GL  IP +G F S N SA      S+    L  + +SC+ +EFQKF++
Sbjct: 220  AENGEMKCGMENGLRGIPWLGEFASVNDSAPLQETDSQDSVDLKPSAVSCSLEEFQKFDS 279

Query: 171  FFSEFMTLSREFFLPPERQSFGLVTERFLLTSLEARDHDSWVMVIHVAGCPNCSKVLKDG 350
            FFS FMT  REFFLPPE+  FGLV+E+ +L+ L   D  SW ++++  GCP+CS +LK+G
Sbjct: 280  FFSSFMTDVREFFLPPEKHRFGLVSEKSMLSPLGVGDSGSWSVMLYYNGCPSCSSILKEG 339

Query: 351  NDFRSALHMHHSPVTELEREGNDADFTLSANKPSMILFVDRSSESLITKRKSQAALQVFR 530
            +D +  L M  S VTELE +G D D  + +NKPS++LFVDRSS+   T+RKS+  L VFR
Sbjct: 340  DDMKRVLQMEKSIVTELEGDGQDLDSAIPSNKPSVLLFVDRSSDLSETRRKSKEGLDVFR 399

Query: 531  KFALDNHVSIQTDLKETVTLSKFSAQAFPGKKGGSASDQSKHPR-RHSTLTRVGSLKNKV 707
            + AL   +S Q   +        S QA            S HP+ + S   +    K+K+
Sbjct: 400  ELALHYQISNQMGQQSNDKSEASSVQA-----STEYQSVSGHPKLKLSPTAQNIKSKDKM 454

Query: 708  SVMVINEGEKIVLNELSADAQGRSIHDIXXXXXXXXXXXXXSSVAKEVGFRLLSDDFEVK 887
            S+M++N+G+ I+LN +++  +G S+H+I             SSVAKE GF+LLSDDF +K
Sbjct: 455  SIMIVNDGKPILLNSMASGLEGSSLHEILTYLLQKKEEAKLSSVAKEAGFQLLSDDFNIK 514

Query: 888  LAELL 902
            + + L
Sbjct: 515  VTDTL 519


>ref|XP_002520910.1| electron transporter, putative [Ricinus communis]
           gi|223539876|gb|EEF41455.1| electron transporter,
           putative [Ricinus communis]
          Length = 587

 Score =  223 bits (567), Expect = 6e-56
 Identities = 131/304 (43%), Positives = 183/304 (60%), Gaps = 5/304 (1%)
 Frame = +3

Query: 15  EKLTCGAESGLGEIPCVGGFTSANQSA---TSETEYTLPGA-GMSCTFDEFQKFEAFFSE 182
           E   CG + G  E+P    F+S N SA    ++ E   P     SCT++EFQ+FE+FFS 
Sbjct: 13  ENSKCGIQDGFSEVPWFVEFSSVNASAFLQDTDAEDIKPDVRSSSCTYEEFQQFESFFSG 72

Query: 183 FMTLSREFFLPPERQSFGLVTERFLLTSLEARDHDSWVMVIHVAGCPNCSKVLKDGNDFR 362
           FM ++REFFL  ER  FGLV+ER LL+SL   D  SW  ++   GCP+CS++LK+G+D +
Sbjct: 73  FMNVAREFFLLSERYRFGLVSERSLLSSLGIGDSGSWSTMLWFNGCPSCSRILKEGDDLK 132

Query: 363 SALHMHHSPVTELEREGNDADFTLSANKPSMILFVDRSSESLITKRKSQAALQVFRKFAL 542
           SAL +H S V ELE  G D D  + AN+PS+ILFVDR S     KRKS+ AL   RKFAL
Sbjct: 133 SALLLHESIVPELEANGQDLDPAIPANRPSVILFVDRFSNLSEIKRKSKEALGELRKFAL 192

Query: 543 DNHVSIQTDLKETVTLSKFSAQAFPGKKGGSASDQSKHPR-RHSTLTRVGSLKNKVSVMV 719
               S Q   +      + SA AF  ++   A     HPR + S +T+    + ++S+M+
Sbjct: 193 TYQNSDQMAQQNGDKSERSSALAFLERRSIFA-----HPRLKLSPVTQKLKFQQQMSIMI 247

Query: 720 INEGEKIVLNELSADAQGRSIHDIXXXXXXXXXXXXXSSVAKEVGFRLLSDDFEVKLAEL 899
           +NEG+  +L+ +++D QG S+H+I             SSVAKEVGF+LLSDD ++KLA+ 
Sbjct: 248 VNEGKNAILDNIASDLQGSSLHEIFTYLLQQKKEAKLSSVAKEVGFQLLSDDIDIKLADE 307

Query: 900 LQPQ 911
           L  +
Sbjct: 308 LSSE 311


>ref|XP_003538969.1| PREDICTED: uncharacterized protein LOC100814325 [Glycine max]
          Length = 1098

 Score =  208 bits (529), Expect = 2e-51
 Identities = 125/311 (40%), Positives = 185/311 (59%), Gaps = 10/311 (3%)
 Frame = +3

Query: 3    GSNNEKL----TCGAESGLG----EIPCVGGFTSANQSATSETEYTLPGAGMSCTFDEFQ 158
            G  N+K+    TC AE G+     E+P +G FTS N      ++        SC+ +EF+
Sbjct: 217  GKTNKKVAEEDTCKAELGVDKGFCEVPWLGEFTSLNYGPLEGSKDRNHHVLHSCSSEEFE 276

Query: 159  KFEAFFSEFMTLSREFFLPPERQSFGLVTERFLLTSLEARDHDSWVMVIHVAGCPNCSKV 338
            +F +F+ +FMT+ RE+FLPPE+  FGLV+ R +L+SL   D+  W  V ++AGC +CS +
Sbjct: 277  RFHSFYLKFMTVVREYFLPPEKNRFGLVSSRSMLSSLGVGDYGPWFAVHYLAGCSSCSNI 336

Query: 339  LKDGNDFRSALHMHHSPVTELEREGNDADFTLSANKPSMILFVDRSSESLITKRKSQAAL 518
            LKD +D +  L M++  V ELE  G+D +  L ANKPS++LFVDRSS+S  T+ KS+ AL
Sbjct: 337  LKDEDDLKYVLQMNNYFVKELEGNGHDQEPVLPANKPSVLLFVDRSSDSSETRGKSKEAL 396

Query: 519  QVFRKFALDNHVSIQTDLKETVTLSKFSAQAFPGKKGGSASDQSKHPR-RHSTLTRVGSL 695
            + FR  A   H   QT  K   +  KFS + + G K       S+HPR + S   +   L
Sbjct: 397  KAFRVLAQHYHRVNQTGNKNNNSHDKFSIRDYHGFK-----STSEHPRLKLSRPAQKIKL 451

Query: 696  KNKV-SVMVINEGEKIVLNELSADAQGRSIHDIXXXXXXXXXXXXXSSVAKEVGFRLLSD 872
            K K+ S+M++NEG+++ L+ +  D QG S++DI             SS+AK++GF+LLSD
Sbjct: 452  KEKISSIMIMNEGKQVSLDNIPLDLQGSSLNDILAYLLQQKKDGKLSSLAKDLGFQLLSD 511

Query: 873  DFEVKLAELLQ 905
            D +V+LA   Q
Sbjct: 512  DIDVRLANTQQ 522


Top