BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027494
         (2071 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat...   950   0.0  
ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   878   0.0  
ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat...   862   0.0  
emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]   847   0.0  
ref|XP_002883423.1| pentatricopeptide repeat-containing protein ...   839   0.0  

>ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  950 bits (2456), Expect = 0.0
 Identities = 469/680 (68%), Positives = 559/680 (82%), Gaps = 14/680 (2%)
 Frame = +3

Query: 63   IIKSFLSKPKKIKSKSQANQLHAQILKTN-PSYTSMVSLVSIYSNLGYLPESLLIFNNFT 239
            + K+ L  P  +KSKSQA QLHAQIL+T+ PS + + +++SIYSNL  L +SLLIFN+  
Sbjct: 7    LCKTLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLSTILSIYSNLNLLHDSLLIFNSLP 66

Query: 240  SP-CTIAWKSIIRCYTXXXXXXXXXXXXVQMRNQGKYPDHNTFPSLLKSSTSLMDFKLGE 416
            SP  T+AWKSIIRCYT            +QM   GKYPDHN FPS+LKS T + D + GE
Sbjct: 67   SPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGE 126

Query: 417  SIHGLVIQLGMDFDLYTGNALMNMYCKLQGKEVSN--------GGTSSRFSNVVS----M 560
            S+HG +I+LGM FDLYT NALMNMY K    E  N        G TS  +S        +
Sbjct: 127  SVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYL 186

Query: 561  ESVKKVFGTMPQRDIVSWNTIVAGNAQNGMYEEALVMVREMGMADLKPDAFTLSSVLPIF 740
             S++KVF  MP+RDIVSWNT+++GNAQNGM+E+AL+MVREMG ADL+PD+FTLSSVLPIF
Sbjct: 187  GSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIF 246

Query: 741  AEYVDVSKGKEIHGYTIRHGFDSDVFIGSSLIDMYANCSRVDDSRQIFSLLPYRDAISWN 920
            AEYV++ KGKEIHGY IR+G+D+DVFIGSSLIDMYA C+RVDDS ++F +LP  D ISWN
Sbjct: 247  AEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWN 306

Query: 921  SVIAASVQSGLFDEGLKLFRQMLMANIKPRHVTFSSLMPACAHLTTLHLGKQLHGYIIRN 1100
            S+IA  VQ+G+FDEGLK F+QML+A IKP HV+FSS+MPACAHLTTLHLGKQLHGYIIR+
Sbjct: 307  SIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRS 366

Query: 1101 NFDDNVFIASSLVDMYAKCGYVRIARSVFNRMGSSDMVSWTAMIMGYALHGHAQDALHLF 1280
             FD NVFIAS+LVDMYAKCG +R AR +F++M   DMVSWTAMIMGYALHGHA DA+ LF
Sbjct: 367  RFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLF 426

Query: 1281 QQMEVVGVRPNYVAFVAILTACSHAGLIDEAQKLFNSMIQDYAISPGLEHYAAVADLLGR 1460
            ++MEV GV+PNYVAF+A+LTACSHAGL+DEA K FNSM QDY I PGLEHYAAVADLLGR
Sbjct: 427  KRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGR 486

Query: 1461 AGRLEEAYKFISSMHIEPTGSVWLALLSSCRVHKNTELAEKVAENIFKVDPENMGVYVLM 1640
             GRLEEAY+FIS MHIEPTGSVW  LL++CRVHKN ELAEKV++ +F VDP+N+G YVL+
Sbjct: 487  VGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLL 546

Query: 1641 SNVYSAAFRWKDAASMRVAMKYKGMRKKPACSWIEVKGEVHAFVSGDKSHPDYDRIHKAL 1820
            SN+YSAA RWKDA  +R+AM+ KGM+KKPACSWIE+K +VHAFV+GDKSHP YDRI++AL
Sbjct: 547  SNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEAL 606

Query: 1821 EVLLEQMEREGYVPNTEDVLHDVEEEQKRNILCTHSERLAIAFGIISTPSGTTLRITKNL 2000
            +VLLEQMEREGYV +T +VLHDVEEEQKR +LC+HSERLAI FGIISTP+GTT+R+TKNL
Sbjct: 607  KVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNL 666

Query: 2001 RVCVDCHIATKLISKIVGRD 2060
            RVCVDCH ATK ISKIVGR+
Sbjct: 667  RVCVDCHTATKFISKIVGRE 686


>ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330-like [Cucumis
            sativus]
          Length = 712

 Score =  878 bits (2268), Expect = 0.0
 Identities = 426/688 (61%), Positives = 536/688 (77%), Gaps = 16/688 (2%)
 Frame = +3

Query: 45   KMSVSPIIKSFLSKPKKIKSKSQANQLHAQILKTNPSYTSMVSLV-SIYSNLGYLPESLL 221
            + S   ++K+ L  P  IKS+SQA QLHAQ+LK   S    +SL+ SIYS++  L +SL 
Sbjct: 2    RTSTEALVKALLRNPLSIKSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLR 61

Query: 222  IFNNFTSPCTIAWKSIIRCYTXXXXXXXXXXXXVQMRNQGKYPDHNTFPSLLKSSTSLMD 401
            +FN    P  +AWKS+IRCYT            + M   G YPDHN FPS+LKS   LMD
Sbjct: 62   LFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMD 121

Query: 402  FKLGESIHGLVIQLGMDFDLYTGNALMNMYCKLQ-----GKEVSNGGT----------SS 536
              LGES+HG +I++G+DFDLYTGNALMNMY KL+     G++    G           S 
Sbjct: 122  LNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSV 181

Query: 537  RFSNVVSMESVKKVFGTMPQRDIVSWNTIVAGNAQNGMYEEALVMVREMGMADLKPDAFT 716
            R  +V+S +SV+K+F  MP++D+VSWNTI+AGNA+NG+YEE L M+REMG A+LKPD+FT
Sbjct: 182  RTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFT 241

Query: 717  LSSVLPIFAEYVDVSKGKEIHGYTIRHGFDSDVFIGSSLIDMYANCSRVDDSRQIFSLLP 896
            LSSVLP+ AE VD+S+GKEIHG +IR G D+D+++ SSLIDMYA C+RV DS ++F+LL 
Sbjct: 242  LSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLT 301

Query: 897  YRDAISWNSVIAASVQSGLFDEGLKLFRQMLMANIKPRHVTFSSLMPACAHLTTLHLGKQ 1076
             RD ISWNS+IA  VQ+GLFDEGL+ FRQMLMA IKP+  +FSS+MPACAHLTTLHLGKQ
Sbjct: 302  ERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQ 361

Query: 1077 LHGYIIRNNFDDNVFIASSLVDMYAKCGYVRIARSVFNRMGSSDMVSWTAMIMGYALHGH 1256
            LHGYI RN FD+N+FIASSLVDMYAKCG +R A+ +F+RM   DMVSWTAMIMG ALHG 
Sbjct: 362  LHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQ 421

Query: 1257 AQDALHLFQQMEVVGVRPNYVAFVAILTACSHAGLIDEAQKLFNSMIQDYAISPGLEHYA 1436
            A DA+ LF+QME  G++PN+VAF+A+LTACSH GL+DEA K FNSM +D+ I+PG+EHYA
Sbjct: 422  APDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYA 481

Query: 1437 AVADLLGRAGRLEEAYKFISSMHIEPTGSVWLALLSSCRVHKNTELAEKVAENIFKVDPE 1616
            AV+DLLGRAGRLEEAY FI  MHI PTGS+W  LLS+CRVH N ++AEKVA  I +VDP 
Sbjct: 482  AVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPN 541

Query: 1617 NMGVYVLMSNVYSAAFRWKDAASMRVAMKYKGMRKKPACSWIEVKGEVHAFVSGDKSHPD 1796
            N G Y+L++N+YSAA RWK+AA  R +M+  G+RK PACSWIEVK +V+AF++GD+SHP 
Sbjct: 542  NTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPC 601

Query: 1797 YDRIHKALEVLLEQMEREGYVPNTEDVLHDVEEEQKRNILCTHSERLAIAFGIISTPSGT 1976
            Y++I +A+EVL+E ME+EGYVP+T +V HDVEEEQK+ ++C+HSERLAI FGII+TP+G 
Sbjct: 602  YEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGM 661

Query: 1977 TLRITKNLRVCVDCHIATKLISKIVGRD 2060
            T+R+TKNLRVC DCH ATK ISKIVGR+
Sbjct: 662  TIRVTKNLRVCTDCHTATKFISKIVGRE 689


>ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  862 bits (2226), Expect = 0.0
 Identities = 422/688 (61%), Positives = 530/688 (77%), Gaps = 16/688 (2%)
 Frame = +3

Query: 45   KMSVSPIIKSFLSKPKKIKSKSQANQLHAQILKTNPSYTSMVSLV-SIYSNLGYLPESLL 221
            + S   ++K+ L  P  IKS+SQA QLHAQ+LK   S    +SL+ SIYS++  L +SL 
Sbjct: 2    RTSTEALVKALLRNPLSIKSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLR 61

Query: 222  IFNNFTSPCTIAWKSIIRCYTXXXXXXXXXXXXVQMRNQGKYPDHNTFPSLLKSSTSLMD 401
            +FN    P  +AWKS+IRCYT            + M   G YPDHN FPS+LKS   LMD
Sbjct: 62   LFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMD 121

Query: 402  FKLGESIHGLVIQLGMDFDLYTGNALMNMYCKLQ-----GKEVSNGGT----------SS 536
              LGES+HG +I++G+DFDLYTGNALMNMY KL+     G++    G           S 
Sbjct: 122  LNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSV 181

Query: 537  RFSNVVSMESVKKVFGTMPQRDIVSWNTIVAGNAQNGMYEEALVMVREMGMADLKPDAFT 716
            R  +V+S +SV+K+F  MP++D+VSWNTI+AGNA+NG+YEE L M+REMG A+LKPD+FT
Sbjct: 182  RTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFT 241

Query: 717  LSSVLPIFAEYVDVSKGKEIHGYTIRHGFDSDVFIGSSLIDMYANCSRVDDSRQIFSLLP 896
            LSSVLP+ AE VD+S+GKEIHG +IR G D+D+++ SSLIDMYA C+RV DS ++F+LL 
Sbjct: 242  LSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLT 301

Query: 897  YRDAISWNSVIAASVQSGLFDEGLKLFRQMLMANIKPRHVTFSSLMPACAHLTTLHLGKQ 1076
             RD ISWNS+IA  VQ+GLFDEGL+ FRQMLMA IKP+  +FSS+MPACAHLTTLHLGKQ
Sbjct: 302  ERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQ 361

Query: 1077 LHGYIIRNNFDDNVFIASSLVDMYAKCGYVRIARSVFNRMGSSDMVSWTAMIMGYALHGH 1256
            LHGYI RN FD+N+FIASSLVDMYAKCG +R A+ +F+RM   DMVSWTAMIMG ALHG 
Sbjct: 362  LHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQ 421

Query: 1257 AQDALHLFQQMEVVGVRPNYVAFVAILTACSHAGLIDEAQKLFNSMIQDYAISPGLEHYA 1436
            A DA+ LF+QME  G++       A+LTACSH GL+DEA K FNSM +D+ I+PG+EHYA
Sbjct: 422  APDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYA 474

Query: 1437 AVADLLGRAGRLEEAYKFISSMHIEPTGSVWLALLSSCRVHKNTELAEKVAENIFKVDPE 1616
            AV+DLLGRAGRLEEAY FI  MHI PTGS+W  LLS+CRVHKN ++AEKVA  I +VDP 
Sbjct: 475  AVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILEVDPN 534

Query: 1617 NMGVYVLMSNVYSAAFRWKDAASMRVAMKYKGMRKKPACSWIEVKGEVHAFVSGDKSHPD 1796
            N G Y+L++N+YSAA RWK+AA  R +M+  G+RK PACSWIEVK +V+AF++GD+SHP 
Sbjct: 535  NTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPC 594

Query: 1797 YDRIHKALEVLLEQMEREGYVPNTEDVLHDVEEEQKRNILCTHSERLAIAFGIISTPSGT 1976
            Y++I +A+EVL+E ME+EGYVP+T +V HDVEEEQK+ ++C+HSERLAI FGII+TP+G 
Sbjct: 595  YEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGM 654

Query: 1977 TLRITKNLRVCVDCHIATKLISKIVGRD 2060
            T+R+TKNLRVC DCH ATK ISKIVGR+
Sbjct: 655  TIRVTKNLRVCTDCHTATKFISKIVGRE 682


>emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  847 bits (2188), Expect = 0.0
 Identities = 421/646 (65%), Positives = 500/646 (77%), Gaps = 68/646 (10%)
 Frame = +3

Query: 327  MRNQGKYPDHNTFPSLLKSSTSLMDFKLGESIHGLVIQLGMDFDLYTGNALMNMYCKLQG 506
            M   GKYPDHN FPS+LKS T + D + GES+HG +I+LGM FDLYT NALMNMY K   
Sbjct: 1    MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 60

Query: 507  KE-----------------------------------------VSNGGTSSRFSNVV-SM 560
             E                                         +   G  ++ SN++  +
Sbjct: 61   LEEGGVQRFCDSKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNILYQV 120

Query: 561  ESVKKVFG--------------------------TMPQRDIVSWNTIVAGNAQNGMYEEA 662
             + KKVF                            MP+RDIVSWNT+++GNAQNGM+E+A
Sbjct: 121  NTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDA 180

Query: 663  LVMVREMGMADLKPDAFTLSSVLPIFAEYVDVSKGKEIHGYTIRHGFDSDVFIGSSLIDM 842
            L+MVREMG ADL+PD+FTLSSVLPIFAEYV++ KGKEIHGY IR+G+D+DVFIGSSLIDM
Sbjct: 181  LMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDM 240

Query: 843  YANCSRVDDSRQIFSLLPYRDAISWNSVIAASVQSGLFDEGLKLFRQMLMANIKPRHVTF 1022
            YA C+RVDDS ++F +LP  D ISWNS+IA  VQ+G+FDEGLK F+QML+A IKP HV+F
Sbjct: 241  YAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSF 300

Query: 1023 SSLMPACAHLTTLHLGKQLHGYIIRNNFDDNVFIASSLVDMYAKCGYVRIARSVFNRMGS 1202
            SS+MPACAHLTTLHLGKQLHGYIIR+ FD NVFIAS+LVDMYAKCG +R AR +F++M  
Sbjct: 301  SSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMEL 360

Query: 1203 SDMVSWTAMIMGYALHGHAQDALHLFQQMEVVGVRPNYVAFVAILTACSHAGLIDEAQKL 1382
             DMVSWTAMIMGYALHGHA DA+ LF++MEV GV+PNYVAF+A+LTACSHAGL+DEA K 
Sbjct: 361  YDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKY 420

Query: 1383 FNSMIQDYAISPGLEHYAAVADLLGRAGRLEEAYKFISSMHIEPTGSVWLALLSSCRVHK 1562
            FNSM QDY I PGLEHYAAVADLLGR GRLEEAY+FIS MHIEPTGSVW  LL++CRVHK
Sbjct: 421  FNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHK 480

Query: 1563 NTELAEKVAENIFKVDPENMGVYVLMSNVYSAAFRWKDAASMRVAMKYKGMRKKPACSWI 1742
            N ELAEKV++ +F VDP+N+G YVL+SN+YSAA RWKDA  +R+AM+ KGM+KKPACSWI
Sbjct: 481  NIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWI 540

Query: 1743 EVKGEVHAFVSGDKSHPDYDRIHKALEVLLEQMEREGYVPNTEDVLHDVEEEQKRNILCT 1922
            E+K +VHAFV+GDKSHP YDRI++AL+VLLEQMEREGYV +T +VLHDVEEEQKR +LC+
Sbjct: 541  EIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCS 600

Query: 1923 HSERLAIAFGIISTPSGTTLRITKNLRVCVDCHIATKLISKIVGRD 2060
            HSERLAI FGIISTP+GTT+R+TKNLRVCVDCH ATK ISKIVGR+
Sbjct: 601  HSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGRE 646



 Score =  167 bits (422), Expect = 1e-38
 Identities = 108/400 (27%), Positives = 188/400 (47%), Gaps = 6/400 (1%)
 Frame = +3

Query: 201  YLPESLLIFNNFTSPCTIAWKSIIRCYTXXXXXXXXXXXXVQMRNQGKYPDHNTFPSLLK 380
            YL     +F        ++W ++I                 +M N    PD  T  S+L 
Sbjct: 145  YLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLP 204

Query: 381  SSTSLMDFKLGESIHGLVIQLGMDFDLYTGNALMNMYCKLQGKEVSNGGTSSRFSNVVSM 560
                 ++   G+ IHG  I+ G D D++ G++L++MY K                    +
Sbjct: 205  IFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAK-----------------CTRV 247

Query: 561  ESVKKVFGTMPQRDIVSWNTIVAGNAQNGMYEEALVMVREMGMADLKPDAFTLSSVLPIF 740
            +   +VF  +PQ D +SWN+I+AG  QNGM++E L   ++M +A +KP+  + SS++P  
Sbjct: 248  DDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPAC 307

Query: 741  AEYVDVSKGKEIHGYTIRHGFDSDVFIGSSLIDMYANCSRVDDSRQIFSLLPYRDAISWN 920
            A    +  GK++HGY IR  FD +VFI S+L+DMYA C  +  +R IF  +   D +SW 
Sbjct: 308  AHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWT 367

Query: 921  SVIAASVQSGLFDEGLKLFRQMLMANIKPRHVTFSSLMPACAHLTTL-----HLGKQLHG 1085
            ++I      G   + + LF++M +  +KP +V F +++ AC+H   +     +       
Sbjct: 368  AMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQD 427

Query: 1086 YIIRNNFDDNVFIASSLVDMYAKCGYVRIARSVFNRMGSSDMVS-WTAMIMGYALHGHAQ 1262
            Y I    +    +A    D+  + G +  A    + M      S W+ ++    +H + +
Sbjct: 428  YRIIPGLEHYAAVA----DLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIE 483

Query: 1263 DALHLFQQMEVVGVRPNYVAFVAILTACSHAGLIDEAQKL 1382
             A  + +++  V  + N  A+V +    S AG   +A+KL
Sbjct: 484  LAEKVSKKLFTVDPQ-NIGAYVLLSNIYSAAGRWKDARKL 522



 Score = 65.1 bits (157), Expect = 7e-08
 Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 2/229 (0%)
 Frame = +3

Query: 51  SVSPIIKSFLS--KPKKIKSKSQANQLHAQILKTNPSYTSMVSLVSIYSNLGYLPESLLI 224
           SV PI   +++  K K+I   +  N   A +   +       SL+ +Y+    + +S  +
Sbjct: 201 SVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGS-------SLIDMYAKCTRVDDSCRV 253

Query: 225 FNNFTSPCTIAWKSIIRCYTXXXXXXXXXXXXVQMRNQGKYPDHNTFPSLLKSSTSLMDF 404
           F        I+W SII                 QM      P+H +F S++ +   L   
Sbjct: 254 FYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTL 313

Query: 405 KLGESIHGLVIQLGMDFDLYTGNALMNMYCKLQGKEVSNGGTSSRFSNVVSMESVKKVFG 584
            LG+ +HG +I+   D +++  +AL++MY K                   ++ + + +F 
Sbjct: 314 HLGKQLHGYIIRSRFDGNVFIASALVDMYAKCG-----------------NIRTARWIFD 356

Query: 585 TMPQRDIVSWNTIVAGNAQNGMYEEALVMVREMGMADLKPDAFTLSSVL 731
            M   D+VSW  ++ G A +G   +A+ + + M +  +KP+     +VL
Sbjct: 357 KMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVL 405


>ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329263|gb|EFH59682.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 679

 Score =  839 bits (2168), Expect = 0.0
 Identities = 406/671 (60%), Positives = 516/671 (76%), Gaps = 1/671 (0%)
 Frame = +3

Query: 51   SVSPIIKSFLSKPKKIKSKSQANQLHAQILKTNP-SYTSMVSLVSIYSNLGYLPESLLIF 227
            S   +IK+ +  P +IKSKSQA QLHAQ ++T   S+TS   ++SIY+NL  L E+LL+F
Sbjct: 3    SSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLVF 62

Query: 228  NNFTSPCTIAWKSIIRCYTXXXXXXXXXXXXVQMRNQGKYPDHNTFPSLLKSSTSLMDFK 407
                SP  +AWKS+IRC+T            V+MR  G+ PDHN FPS+LKS T +MD +
Sbjct: 63   KTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLR 122

Query: 408  LGESIHGLVIQLGMDFDLYTGNALMNMYCKLQGKEVSNGGTSSRFSNVVSMESVKKVFGT 587
             GES+HG +++LGMD DLYTGNALMNMY KL G                 ++SV+KVF  
Sbjct: 123  FGESVHGFIVRLGMDCDLYTGNALMNMYSKLLG-----------------IDSVRKVFEL 165

Query: 588  MPQRDIVSWNTIVAGNAQNGMYEEALVMVREMGMADLKPDAFTLSSVLPIFAEYVDVSKG 767
            MP++D+VS+NT++AG AQ+GMYE+AL MVREMG +DLKPDAFTLSSVLPIF+EYVDV KG
Sbjct: 166  MPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKG 225

Query: 768  KEIHGYTIRHGFDSDVFIGSSLIDMYANCSRVDDSRQIFSLLPYRDAISWNSVIAASVQS 947
            KEIHGY IR G DSDV+IGSSL+DMYA  +R++DS ++FS L  RD+ISWNS++A  VQ+
Sbjct: 226  KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQN 285

Query: 948  GLFDEGLKLFRQMLMANIKPRHVTFSSLMPACAHLTTLHLGKQLHGYIIRNNFDDNVFIA 1127
            G ++E L+LFRQM+ A ++P  V FSS++PACAHL TLHLGKQLHGY++R  F  N+FIA
Sbjct: 286  GRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIA 345

Query: 1128 SSLVDMYAKCGYVRIARSVFNRMGSSDMVSWTAMIMGYALHGHAQDALHLFQQMEVVGVR 1307
            S+LVDMY+KCG ++ AR +F+RM   D VSWTA+IMG+ALHGH  +A+ LF++M+  GV+
Sbjct: 346  SALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 405

Query: 1308 PNYVAFVAILTACSHAGLIDEAQKLFNSMIQDYAISPGLEHYAAVADLLGRAGRLEEAYK 1487
            PN VAFVA+LTACSH GL+DEA   FNSM + Y ++  LEHYAAVADLLGRAG+LEEAY 
Sbjct: 406  PNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYD 465

Query: 1488 FISSMHIEPTGSVWLALLSSCRVHKNTELAEKVAENIFKVDPENMGVYVLMSNVYSAAFR 1667
            FIS M +EPTGSVW  LLSSC VHKN ELAEKVAE IF +D ENMG YVLM N+Y++  R
Sbjct: 466  FISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGR 525

Query: 1668 WKDAASMRVAMKYKGMRKKPACSWIEVKGEVHAFVSGDKSHPDYDRIHKALEVLLEQMER 1847
            WK+ A +R+ ++ KG+RKKPACSWIE+K + H FVSGD+SHP  DRI++ L+ ++EQME+
Sbjct: 526  WKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEK 585

Query: 1848 EGYVPNTEDVLHDVEEEQKRNILCTHSERLAIAFGIISTPSGTTLRITKNLRVCVDCHIA 2027
            EGYV +T  VLHDV+EE KR +L  HSERLA+AFGII+T  GTT+R+TKN+R+C DCH+A
Sbjct: 586  EGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVA 645

Query: 2028 TKLISKIVGRD 2060
             K ISKI  R+
Sbjct: 646  IKFISKITERE 656