BLASTX nr result

ID: Coptis25_contig00027480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027480
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284090.1| PREDICTED: uncharacterized protein LOC100268...   134   3e-29
ref|XP_003525279.1| PREDICTED: uncharacterized protein LOC100779...   105   1e-20
ref|XP_002331169.1| predicted protein [Populus trichocarpa] gi|2...   100   4e-19
ref|NP_001237407.1| uncharacterized protein LOC100527788 [Glycin...    93   7e-17
ref|XP_003517062.1| PREDICTED: uncharacterized protein LOC100801...    84   6e-14

>ref|XP_002284090.1| PREDICTED: uncharacterized protein LOC100268083 [Vitis vinifera]
           gi|297738787|emb|CBI28032.3| unnamed protein product
           [Vitis vinifera]
          Length = 195

 Score =  134 bits (337), Expect = 3e-29
 Identities = 76/189 (40%), Positives = 105/189 (55%), Gaps = 1/189 (0%)
 Frame = +2

Query: 116 MGSSHFGELILGNXXXXXXXXXXXXXXXXXXXX-RGLGVAQLEKIRLHNQMSSGLLPAVH 292
           MGSS+FGE  +GN                     RGLGVAQLEKIRLH+QM    +P++H
Sbjct: 1   MGSSYFGEPNMGNERSGSSRKGKKSNSDKPKQPQRGLGVAQLEKIRLHSQMGCSYMPSLH 60

Query: 293 APYATHHINQEQDXXXXXXXXXXXXXXXXXXXXLPPTGFGFPPNVMMGMGEMEPRDMRYA 472
            PY T    ++                           +GF PN+MMG+ EM+  ++RY 
Sbjct: 61  GPYPTTLNQEDMRVQTAYSSVPSSSSFSYSPSSSSTASYGFHPNMMMGLSEMDRSNIRYG 120

Query: 473 DPQSSTPTRWNYNNGIIENQYPNQPDMNKPIFSLQMEHDSAQNKRRKARGDSMGSCSQNS 652
           D Q ST  RWN ++G +E Q  +Q +M + + +L++E DS Q KR+K R DS+GS SQNS
Sbjct: 121 DSQPSTTARWNPSSGTMETQQYSQLNMTRHLLNLEVE-DSFQKKRKKDRSDSLGSSSQNS 179

Query: 653 DSSETQEID 679
           +SS+TQE+D
Sbjct: 180 ESSDTQELD 188


>ref|XP_003525279.1| PREDICTED: uncharacterized protein LOC100779060 isoform 1 [Glycine
           max]
          Length = 220

 Score =  105 bits (263), Expect = 1e-20
 Identities = 67/195 (34%), Positives = 94/195 (48%), Gaps = 5/195 (2%)
 Frame = +2

Query: 110 EEMGSSHFGELILGNXXXXXXXXXXXXXXXXXXXX-----RGLGVAQLEKIRLHNQMSSG 274
           ++MGSS+FGE   GN                         RGLGVAQLEKIRLH     G
Sbjct: 29  QDMGSSYFGEPNFGNERASCSSSSRKGKKSHNSDKPKQPQRGLGVAQLEKIRLH-----G 83

Query: 275 LLPAVHAPYATHHINQEQDXXXXXXXXXXXXXXXXXXXXLPPTGFGFPPNVMMGMGEMEP 454
             P++HAPY ++  N++                           +GF PN+MMG+ E + 
Sbjct: 84  YHPSLHAPYPSNFSNEDPRVQIAYSSVPSSSFSYSSSYA---ASYGFQPNIMMGLSEYQK 140

Query: 455 RDMRYADPQSSTPTRWNYNNGIIENQYPNQPDMNKPIFSLQMEHDSAQNKRRKARGDSMG 634
            ++RY D Q +   RW   + I+E+QY    ++ +P  +L   H       RK R  S+G
Sbjct: 141 TNIRYGDSQPTNTARWETTSVILESQYSAPSNIARPFLNLNDTHQDIDT--RKHRNGSVG 198

Query: 635 SCSQNSDSSETQEID 679
           S SQNS+SS+TQE+D
Sbjct: 199 SSSQNSESSDTQELD 213


>ref|XP_002331169.1| predicted protein [Populus trichocarpa] gi|222873252|gb|EEF10383.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  100 bits (249), Expect = 4e-19
 Identities = 73/192 (38%), Positives = 96/192 (50%), Gaps = 4/192 (2%)
 Frame = +2

Query: 116 MGSSHFGELILGNXXXXXXXXXXXXXXXXXXXX--RGLGVAQLEKIRLHNQMSSGLLPAV 289
           MGS +FGE  LGN                      RGLGVAQLEKIRLH QM+S   P++
Sbjct: 1   MGSGYFGEPNLGNNERGGSSRKGKKSNSDKPKQPQRGLGVAQLEKIRLHGQMASDYHPSL 60

Query: 290 H-APYATHHINQEQDXXXXXXXXXXXXXXXXXXXXLPPTGFGFPPNVMMGMGEMEPRDMR 466
           H  PY T   NQ++D                         FG+ PN MMG+G+ +  ++R
Sbjct: 61  HRTPYPT-TFNQQED---------IRVQTGYSPTAASSASFGY-PNFMMGLGDYDRTNIR 109

Query: 467 Y-ADPQSSTPTRWNYNNGIIENQYPNQPDMNKPIFSLQMEHDSAQNKRRKARGDSMGSCS 643
           Y  D Q  T   WN  + I E Q+  Q +  +  + LQ+E D+ Q   +K R  SMGS S
Sbjct: 110 YGGDFQPPTAASWNSGHNIYEAQHYAQANATRHPWPLQVE-DTPQKHSKKHRSSSMGSSS 168

Query: 644 QNSDSSETQEID 679
           QNS+S +TQE+D
Sbjct: 169 QNSESRDTQELD 180


>ref|NP_001237407.1| uncharacterized protein LOC100527788 [Glycine max]
           gi|255633212|gb|ACU16962.1| unknown [Glycine max]
          Length = 189

 Score = 93.2 bits (230), Expect = 7e-17
 Identities = 66/196 (33%), Positives = 94/196 (47%), Gaps = 8/196 (4%)
 Frame = +2

Query: 116 MGSSHFGELILGNXXXXXXXXXXXXXXXXXXXX-------RGLGVAQLEKIRLHNQMSSG 274
           MGSS+FG+  LGN                           RGLGVAQLEKIRLH     G
Sbjct: 1   MGSSYFGKPNLGNERASGSSSSTRKGKKNNNSDKLPKQPQRGLGVAQLEKIRLH-----G 55

Query: 275 LLPAVHAP-YATHHINQEQDXXXXXXXXXXXXXXXXXXXXLPPTGFGFPPNVMMGMGEME 451
             P++ AP Y ++  N++                           +GF PN+MMG+ E +
Sbjct: 56  YHPSLRAPNYPSNFTNEDPRVQIASSFSYSSSSTSSYA-----ASYGFQPNIMMGLSEYQ 110

Query: 452 PRDMRYADPQSSTPTRWNYNNGIIENQYPNQPDMNKPIFSLQMEHDSAQNKRRKARGDSM 631
             ++RY D Q +   RW   + I+E+QY    ++ +P  +L    +  Q+  RK R  S+
Sbjct: 111 KTNIRYEDSQPTNIARWETASVILESQYSAPSNIARPFLNL----NDTQDIDRKHRNGSV 166

Query: 632 GSCSQNSDSSETQEID 679
           GS SQNS+SS+TQE+D
Sbjct: 167 GSSSQNSESSDTQELD 182


>ref|XP_003517062.1| PREDICTED: uncharacterized protein LOC100801080 [Glycine max]
          Length = 190

 Score = 83.6 bits (205), Expect = 6e-14
 Identities = 63/199 (31%), Positives = 87/199 (43%), Gaps = 11/199 (5%)
 Frame = +2

Query: 116 MGSSHFGELILGNXXXXXXXXXXXXXXXXXXXX-------RGLGVAQLEKIRLHNQMS-S 271
           M SS+FGE  +GN                           RGLGVAQLEKIRLH QM+  
Sbjct: 1   MDSSYFGEPNMGNERVSGSSSSSSSRKGKKNNQDKSKQPQRGLGVAQLEKIRLHGQMACG 60

Query: 272 GLLPAVHAPYATHHINQE---QDXXXXXXXXXXXXXXXXXXXXLPPTGFGFPPNVMMGMG 442
           G  P +H+PY ++  N++   Q                      P   +GF PN++M + 
Sbjct: 61  GYHPPLHSPYPSNFNNEDPRVQTPYSSVPSSSSSSFSYSSTSYSP--SYGFQPNIVMSLP 118

Query: 443 EMEPRDMRYADPQSSTPTRWNYNNGIIENQYPNQPDMNKPIFSLQMEHDSAQNKRRKARG 622
           E E   +RY D Q +   RW ++               +P+ +L   +DS     +K R 
Sbjct: 119 EYERTSIRYGDSQPTNTARWEHSTA-----------QTRPLLNL---YDSQHIDTKKHRS 164

Query: 623 DSMGSCSQNSDSSETQEID 679
            S G  SQNS+SS+TQE D
Sbjct: 165 GSRGESSQNSESSDTQEPD 183


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