BLASTX nr result

ID: Coptis25_contig00027477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027477
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM05612.1| pectate lyase, partial [Eucalyptus pyrocarpa]         250   1e-64
dbj|BAM05611.1| pectate lyase, partial [Eucalyptus pilularis]         248   6e-64
ref|XP_002268818.1| PREDICTED: probable pectate lyase 12 [Vitis ...   248   6e-64
gb|ADU02586.1| pectate lyase-like protein 1 [Vitis vinifera]          247   2e-63
dbj|BAM05613.1| pectate lyase, partial [Eucalyptus globulus subs...   246   3e-63

>dbj|BAM05612.1| pectate lyase, partial [Eucalyptus pyrocarpa]
          Length = 334

 Score =  250 bits (639), Expect = 1e-64
 Identities = 113/145 (77%), Positives = 130/145 (89%)
 Frame = +2

Query: 2   DDYIPDSGMQVTIAFNHFGEALIQRMPRCRRGYFHVVNNDFTQWEMYAIGGSGNPTINSQ 181
           D Y PDSGMQVTIAFNHFGE L+QRMPRCRRGY HVVNNDFT+W+MYAIGGS NPTINSQ
Sbjct: 110 DSYAPDSGMQVTIAFNHFGEGLVQRMPRCRRGYIHVVNNDFTEWKMYAIGGSANPTINSQ 169

Query: 182 GNRYTAPSDPNAKEVTKRVETKDGEWSDWDWRSDGDEMVNGAFFVPSGSGVGMKYSKASS 361
           GNRYTAP D +AK+VTKRV+T++ EW+DW+WR++GD MVNGA+FVPSG G+  +YSKASS
Sbjct: 170 GNRYTAPVDADAKQVTKRVDTEENEWTDWNWRTEGDMMVNGAYFVPSGVGLSAQYSKASS 229

Query: 362 VEPKSAGLIDRLTMNAGVMGGSRDN 436
           +EPKSAGLID+LTMNAGV G  RDN
Sbjct: 230 LEPKSAGLIDQLTMNAGVFGDPRDN 254


>dbj|BAM05611.1| pectate lyase, partial [Eucalyptus pilularis]
          Length = 333

 Score =  248 bits (634), Expect = 6e-64
 Identities = 112/145 (77%), Positives = 130/145 (89%)
 Frame = +2

Query: 2   DDYIPDSGMQVTIAFNHFGEALIQRMPRCRRGYFHVVNNDFTQWEMYAIGGSGNPTINSQ 181
           D + PDSGMQVTIAFNHFGE L+QRMPRCRRGY HVVNNDFT+W+MYAIGGS NPTINSQ
Sbjct: 108 DSFAPDSGMQVTIAFNHFGEGLVQRMPRCRRGYIHVVNNDFTEWKMYAIGGSANPTINSQ 167

Query: 182 GNRYTAPSDPNAKEVTKRVETKDGEWSDWDWRSDGDEMVNGAFFVPSGSGVGMKYSKASS 361
           GNRYTAP D +AK+VTKRV+T++ +W+DW+WR++GD MVNGAFFVPSG G+  +YSKASS
Sbjct: 168 GNRYTAPVDADAKQVTKRVDTEENDWTDWNWRTEGDIMVNGAFFVPSGVGLSAQYSKASS 227

Query: 362 VEPKSAGLIDRLTMNAGVMGGSRDN 436
           +EPKSAGLID+LTMNAGV G  RDN
Sbjct: 228 LEPKSAGLIDQLTMNAGVFGDPRDN 252


>ref|XP_002268818.1| PREDICTED: probable pectate lyase 12 [Vitis vinifera]
           gi|296085972|emb|CBI31413.3| unnamed protein product
           [Vitis vinifera]
          Length = 496

 Score =  248 bits (634), Expect = 6e-64
 Identities = 114/145 (78%), Positives = 128/145 (88%)
 Frame = +2

Query: 2   DDYIPDSGMQVTIAFNHFGEALIQRMPRCRRGYFHVVNNDFTQWEMYAIGGSGNPTINSQ 181
           D Y PDSGMQVTIAFNHFGE L+QRMPRCRRGY HVVNNDFTQWEMYAIGGS NPTINSQ
Sbjct: 274 DKYSPDSGMQVTIAFNHFGEGLVQRMPRCRRGYIHVVNNDFTQWEMYAIGGSANPTINSQ 333

Query: 182 GNRYTAPSDPNAKEVTKRVETKDGEWSDWDWRSDGDEMVNGAFFVPSGSGVGMKYSKASS 361
           GNRYTAP D NAKEVTKRVET + +W++W+WR++GD MVNGAFFVPSG G+  +Y+KASS
Sbjct: 334 GNRYTAPGDINAKEVTKRVETDEEDWAEWNWRTEGDVMVNGAFFVPSGVGLSTQYAKASS 393

Query: 362 VEPKSAGLIDRLTMNAGVMGGSRDN 436
           VEPKSA LI +LTMNAG + GSRD+
Sbjct: 394 VEPKSAALIQQLTMNAGALSGSRDD 418


>gb|ADU02586.1| pectate lyase-like protein 1 [Vitis vinifera]
          Length = 496

 Score =  247 bits (630), Expect = 2e-63
 Identities = 113/145 (77%), Positives = 128/145 (88%)
 Frame = +2

Query: 2   DDYIPDSGMQVTIAFNHFGEALIQRMPRCRRGYFHVVNNDFTQWEMYAIGGSGNPTINSQ 181
           D Y PDSGMQVTIAFNHFGE L+QRMPRCRRGY HVVNNDFT+WEMYAIGGS NPTINSQ
Sbjct: 274 DKYSPDSGMQVTIAFNHFGEGLVQRMPRCRRGYIHVVNNDFTRWEMYAIGGSANPTINSQ 333

Query: 182 GNRYTAPSDPNAKEVTKRVETKDGEWSDWDWRSDGDEMVNGAFFVPSGSGVGMKYSKASS 361
           GNRYTAP D NAKEVTKRVET + +W++W+WR++GD MVNGAFFVPSG G+  +Y+KASS
Sbjct: 334 GNRYTAPGDINAKEVTKRVETDEEDWAEWNWRTEGDVMVNGAFFVPSGVGLSTQYAKASS 393

Query: 362 VEPKSAGLIDRLTMNAGVMGGSRDN 436
           VEPKSA LI +LTMNAG + GSRD+
Sbjct: 394 VEPKSAALIQQLTMNAGALSGSRDD 418


>dbj|BAM05613.1| pectate lyase, partial [Eucalyptus globulus subsp. globulus]
          Length = 324

 Score =  246 bits (628), Expect = 3e-63
 Identities = 111/144 (77%), Positives = 128/144 (88%)
 Frame = +2

Query: 2   DDYIPDSGMQVTIAFNHFGEALIQRMPRCRRGYFHVVNNDFTQWEMYAIGGSGNPTINSQ 181
           D Y PDSGMQVTIAFNHFGE L+QRMPRCRRGY HVVNNDFT+W MYAIGGS NPTINSQ
Sbjct: 108 DSYAPDSGMQVTIAFNHFGEGLVQRMPRCRRGYIHVVNNDFTEWHMYAIGGSANPTINSQ 167

Query: 182 GNRYTAPSDPNAKEVTKRVETKDGEWSDWDWRSDGDEMVNGAFFVPSGSGVGMKYSKASS 361
           GNRYTAP D +AK+VTKRV+T++ +W+DW+WR++GD MVNGAFFVPSG G+  +YSKASS
Sbjct: 168 GNRYTAPVDADAKQVTKRVDTEENDWADWNWRTEGDIMVNGAFFVPSGVGLSAQYSKASS 227

Query: 362 VEPKSAGLIDRLTMNAGVMGGSRD 433
           +EPKSAGLID+LT+NAGV G  RD
Sbjct: 228 LEPKSAGLIDQLTLNAGVFGDPRD 251


Top