BLASTX nr result
ID: Coptis25_contig00027477
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00027477 (665 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAM05612.1| pectate lyase, partial [Eucalyptus pyrocarpa] 250 1e-64 dbj|BAM05611.1| pectate lyase, partial [Eucalyptus pilularis] 248 6e-64 ref|XP_002268818.1| PREDICTED: probable pectate lyase 12 [Vitis ... 248 6e-64 gb|ADU02586.1| pectate lyase-like protein 1 [Vitis vinifera] 247 2e-63 dbj|BAM05613.1| pectate lyase, partial [Eucalyptus globulus subs... 246 3e-63 >dbj|BAM05612.1| pectate lyase, partial [Eucalyptus pyrocarpa] Length = 334 Score = 250 bits (639), Expect = 1e-64 Identities = 113/145 (77%), Positives = 130/145 (89%) Frame = +2 Query: 2 DDYIPDSGMQVTIAFNHFGEALIQRMPRCRRGYFHVVNNDFTQWEMYAIGGSGNPTINSQ 181 D Y PDSGMQVTIAFNHFGE L+QRMPRCRRGY HVVNNDFT+W+MYAIGGS NPTINSQ Sbjct: 110 DSYAPDSGMQVTIAFNHFGEGLVQRMPRCRRGYIHVVNNDFTEWKMYAIGGSANPTINSQ 169 Query: 182 GNRYTAPSDPNAKEVTKRVETKDGEWSDWDWRSDGDEMVNGAFFVPSGSGVGMKYSKASS 361 GNRYTAP D +AK+VTKRV+T++ EW+DW+WR++GD MVNGA+FVPSG G+ +YSKASS Sbjct: 170 GNRYTAPVDADAKQVTKRVDTEENEWTDWNWRTEGDMMVNGAYFVPSGVGLSAQYSKASS 229 Query: 362 VEPKSAGLIDRLTMNAGVMGGSRDN 436 +EPKSAGLID+LTMNAGV G RDN Sbjct: 230 LEPKSAGLIDQLTMNAGVFGDPRDN 254 >dbj|BAM05611.1| pectate lyase, partial [Eucalyptus pilularis] Length = 333 Score = 248 bits (634), Expect = 6e-64 Identities = 112/145 (77%), Positives = 130/145 (89%) Frame = +2 Query: 2 DDYIPDSGMQVTIAFNHFGEALIQRMPRCRRGYFHVVNNDFTQWEMYAIGGSGNPTINSQ 181 D + PDSGMQVTIAFNHFGE L+QRMPRCRRGY HVVNNDFT+W+MYAIGGS NPTINSQ Sbjct: 108 DSFAPDSGMQVTIAFNHFGEGLVQRMPRCRRGYIHVVNNDFTEWKMYAIGGSANPTINSQ 167 Query: 182 GNRYTAPSDPNAKEVTKRVETKDGEWSDWDWRSDGDEMVNGAFFVPSGSGVGMKYSKASS 361 GNRYTAP D +AK+VTKRV+T++ +W+DW+WR++GD MVNGAFFVPSG G+ +YSKASS Sbjct: 168 GNRYTAPVDADAKQVTKRVDTEENDWTDWNWRTEGDIMVNGAFFVPSGVGLSAQYSKASS 227 Query: 362 VEPKSAGLIDRLTMNAGVMGGSRDN 436 +EPKSAGLID+LTMNAGV G RDN Sbjct: 228 LEPKSAGLIDQLTMNAGVFGDPRDN 252 >ref|XP_002268818.1| PREDICTED: probable pectate lyase 12 [Vitis vinifera] gi|296085972|emb|CBI31413.3| unnamed protein product [Vitis vinifera] Length = 496 Score = 248 bits (634), Expect = 6e-64 Identities = 114/145 (78%), Positives = 128/145 (88%) Frame = +2 Query: 2 DDYIPDSGMQVTIAFNHFGEALIQRMPRCRRGYFHVVNNDFTQWEMYAIGGSGNPTINSQ 181 D Y PDSGMQVTIAFNHFGE L+QRMPRCRRGY HVVNNDFTQWEMYAIGGS NPTINSQ Sbjct: 274 DKYSPDSGMQVTIAFNHFGEGLVQRMPRCRRGYIHVVNNDFTQWEMYAIGGSANPTINSQ 333 Query: 182 GNRYTAPSDPNAKEVTKRVETKDGEWSDWDWRSDGDEMVNGAFFVPSGSGVGMKYSKASS 361 GNRYTAP D NAKEVTKRVET + +W++W+WR++GD MVNGAFFVPSG G+ +Y+KASS Sbjct: 334 GNRYTAPGDINAKEVTKRVETDEEDWAEWNWRTEGDVMVNGAFFVPSGVGLSTQYAKASS 393 Query: 362 VEPKSAGLIDRLTMNAGVMGGSRDN 436 VEPKSA LI +LTMNAG + GSRD+ Sbjct: 394 VEPKSAALIQQLTMNAGALSGSRDD 418 >gb|ADU02586.1| pectate lyase-like protein 1 [Vitis vinifera] Length = 496 Score = 247 bits (630), Expect = 2e-63 Identities = 113/145 (77%), Positives = 128/145 (88%) Frame = +2 Query: 2 DDYIPDSGMQVTIAFNHFGEALIQRMPRCRRGYFHVVNNDFTQWEMYAIGGSGNPTINSQ 181 D Y PDSGMQVTIAFNHFGE L+QRMPRCRRGY HVVNNDFT+WEMYAIGGS NPTINSQ Sbjct: 274 DKYSPDSGMQVTIAFNHFGEGLVQRMPRCRRGYIHVVNNDFTRWEMYAIGGSANPTINSQ 333 Query: 182 GNRYTAPSDPNAKEVTKRVETKDGEWSDWDWRSDGDEMVNGAFFVPSGSGVGMKYSKASS 361 GNRYTAP D NAKEVTKRVET + +W++W+WR++GD MVNGAFFVPSG G+ +Y+KASS Sbjct: 334 GNRYTAPGDINAKEVTKRVETDEEDWAEWNWRTEGDVMVNGAFFVPSGVGLSTQYAKASS 393 Query: 362 VEPKSAGLIDRLTMNAGVMGGSRDN 436 VEPKSA LI +LTMNAG + GSRD+ Sbjct: 394 VEPKSAALIQQLTMNAGALSGSRDD 418 >dbj|BAM05613.1| pectate lyase, partial [Eucalyptus globulus subsp. globulus] Length = 324 Score = 246 bits (628), Expect = 3e-63 Identities = 111/144 (77%), Positives = 128/144 (88%) Frame = +2 Query: 2 DDYIPDSGMQVTIAFNHFGEALIQRMPRCRRGYFHVVNNDFTQWEMYAIGGSGNPTINSQ 181 D Y PDSGMQVTIAFNHFGE L+QRMPRCRRGY HVVNNDFT+W MYAIGGS NPTINSQ Sbjct: 108 DSYAPDSGMQVTIAFNHFGEGLVQRMPRCRRGYIHVVNNDFTEWHMYAIGGSANPTINSQ 167 Query: 182 GNRYTAPSDPNAKEVTKRVETKDGEWSDWDWRSDGDEMVNGAFFVPSGSGVGMKYSKASS 361 GNRYTAP D +AK+VTKRV+T++ +W+DW+WR++GD MVNGAFFVPSG G+ +YSKASS Sbjct: 168 GNRYTAPVDADAKQVTKRVDTEENDWADWNWRTEGDIMVNGAFFVPSGVGLSAQYSKASS 227 Query: 362 VEPKSAGLIDRLTMNAGVMGGSRD 433 +EPKSAGLID+LT+NAGV G RD Sbjct: 228 LEPKSAGLIDQLTLNAGVFGDPRD 251