BLASTX nr result

ID: Coptis25_contig00027474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027474
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535731.1| PREDICTED: CTL-like protein DDB_G0274487-lik...    67   1e-09
ref|XP_003555227.1| PREDICTED: CTL-like protein DDB_G0274487-lik...    66   3e-09
ref|XP_002282011.1| PREDICTED: CTL-like protein DDB_G0274487 [Vi...    66   3e-09
ref|XP_003517992.1| PREDICTED: CTL-like protein DDB_G0274487-lik...    65   7e-09
ref|XP_003637427.1| Choline transporter-like protein [Medicago t...    65   7e-09

>ref|XP_003535731.1| PREDICTED: CTL-like protein DDB_G0274487-like [Glycine max]
          Length = 440

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 33/72 (45%), Positives = 45/72 (62%)
 Frame = -2

Query: 216 INRFQRADRLNIDKFTDKWIKTKANLTETYWRYYXXXXXXXXXXXXXXXXXXGSKANQMM 37
           +NRF+R +RLNIDK+T ++ + ++ LTETYW  Y                  G +A QMM
Sbjct: 10  LNRFERENRLNIDKYTSRFSENESGLTETYWPLYAAAGGVGTFLGWSWLLLLGFQATQMM 69

Query: 36  KLSVHVLTTYLA 1
           K+SVH+LTTYLA
Sbjct: 70  KVSVHILTTYLA 81


>ref|XP_003555227.1| PREDICTED: CTL-like protein DDB_G0274487-like [Glycine max]
          Length = 493

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/72 (44%), Positives = 45/72 (62%)
 Frame = -2

Query: 216 INRFQRADRLNIDKFTDKWIKTKANLTETYWRYYXXXXXXXXXXXXXXXXXXGSKANQMM 37
           +NRF+R +RLNIDK+T ++ + ++ LTETYW  Y                  G +A QMM
Sbjct: 63  LNRFERENRLNIDKYTSRFSENESGLTETYWPLYAAAGGVGTVLGWSWLLLLGFQATQMM 122

Query: 36  KLSVHVLTTYLA 1
           K++VH+LTTYLA
Sbjct: 123 KVTVHILTTYLA 134


>ref|XP_002282011.1| PREDICTED: CTL-like protein DDB_G0274487 [Vitis vinifera]
           gi|297737849|emb|CBI27050.3| unnamed protein product
           [Vitis vinifera]
          Length = 504

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/72 (45%), Positives = 42/72 (58%)
 Frame = -2

Query: 216 INRFQRADRLNIDKFTDKWIKTKANLTETYWRYYXXXXXXXXXXXXXXXXXXGSKANQMM 37
           +NRF++ DRL ID+FT +  +    LTE YW  Y                  GS+ANQMM
Sbjct: 74  LNRFRKTDRLKIDRFTTRLSENSKGLTENYWPLYAVAGGVGTFLGWAWLLLLGSRANQMM 133

Query: 36  KLSVHVLTTYLA 1
           K+SVH+LTTYLA
Sbjct: 134 KVSVHILTTYLA 145


>ref|XP_003517992.1| PREDICTED: CTL-like protein DDB_G0274487-like [Glycine max]
          Length = 459

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/72 (44%), Positives = 46/72 (63%)
 Frame = -2

Query: 216 INRFQRADRLNIDKFTDKWIKTKANLTETYWRYYXXXXXXXXXXXXXXXXXXGSKANQMM 37
           +NRF++ +RL+IDK+T ++++ +A LTE YW  Y                  GS+A QMM
Sbjct: 32  LNRFKQKNRLDIDKYTYRFMENEAGLTEDYWPLYAVAGGLGTALGWSWLLLLGSRATQMM 91

Query: 36  KLSVHVLTTYLA 1
           K+SVH+LTTYLA
Sbjct: 92  KVSVHILTTYLA 103


>ref|XP_003637427.1| Choline transporter-like protein [Medicago truncatula]
           gi|355503362|gb|AES84565.1| Choline transporter-like
           protein [Medicago truncatula]
          Length = 371

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/72 (47%), Positives = 42/72 (58%)
 Frame = -2

Query: 216 INRFQRADRLNIDKFTDKWIKTKANLTETYWRYYXXXXXXXXXXXXXXXXXXGSKANQMM 37
           +NRF++ +RLNIDK+T       A LTETYW  Y                  GS+A QMM
Sbjct: 68  LNRFEKENRLNIDKYTPGLTGNHAGLTETYWPLYAAAGGIGTVLGWTWLLLLGSQATQMM 127

Query: 36  KLSVHVLTTYLA 1
           K+SVH+LTTYLA
Sbjct: 128 KVSVHILTTYLA 139


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