BLASTX nr result
ID: Coptis25_contig00027469
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00027469 (587 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi... 159 3e-37 ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containi... 155 6e-36 emb|CBI22140.3| unnamed protein product [Vitis vinifera] 155 6e-36 ref|XP_002303536.1| predicted protein [Populus trichocarpa] gi|2... 143 2e-32 ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containi... 140 2e-31 >ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein At4g22760-like [Vitis vinifera] gi|296083555|emb|CBI23551.3| unnamed protein product [Vitis vinifera] Length = 580 Score = 159 bits (403), Expect = 3e-37 Identities = 73/101 (72%), Positives = 85/101 (84%) Frame = +2 Query: 2 VYLLGRAGRLDKAHGLIKSMPMRPNVGVWGALLLTCQLHSNVELGEIAAQHCIEMEPDSS 181 V L GRAGRL +A LIKSMPM+P+ GVWGALLL C+LH+NVE GEIAAQHC E+EPD++ Sbjct: 478 VDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTT 537 Query: 182 GYCSLLANIYASAERWDDAKRLRKMMEETKLTKTPGCSWME 304 GYCSLL+NIYAS ERWDD KRLRK+ +E +K PGCSWME Sbjct: 538 GYCSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPGCSWME 578 >ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein At4g22760-like [Vitis vinifera] Length = 580 Score = 155 bits (391), Expect = 6e-36 Identities = 72/101 (71%), Positives = 84/101 (83%) Frame = +2 Query: 2 VYLLGRAGRLDKAHGLIKSMPMRPNVGVWGALLLTCQLHSNVELGEIAAQHCIEMEPDSS 181 V L GRAGRL +A LIKSMPM+P+ GVWGALLL C+LH+NVE GEIAAQHC E+EPD++ Sbjct: 478 VDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTT 537 Query: 182 GYCSLLANIYASAERWDDAKRLRKMMEETKLTKTPGCSWME 304 GY SLL+NIYAS ERWDD KRLRK+ +E +K PGCSWME Sbjct: 538 GYRSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPGCSWME 578 >emb|CBI22140.3| unnamed protein product [Vitis vinifera] Length = 428 Score = 155 bits (391), Expect = 6e-36 Identities = 72/101 (71%), Positives = 84/101 (83%) Frame = +2 Query: 2 VYLLGRAGRLDKAHGLIKSMPMRPNVGVWGALLLTCQLHSNVELGEIAAQHCIEMEPDSS 181 V L GRAGRL +A LIKSMPM+P+ GVWGALLL C+LH+NVE GEIAAQHC E+EPD++ Sbjct: 326 VDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTT 385 Query: 182 GYCSLLANIYASAERWDDAKRLRKMMEETKLTKTPGCSWME 304 GY SLL+NIYAS ERWDD KRLRK+ +E +K PGCSWME Sbjct: 386 GYRSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPGCSWME 426 >ref|XP_002303536.1| predicted protein [Populus trichocarpa] gi|222840968|gb|EEE78515.1| predicted protein [Populus trichocarpa] Length = 596 Score = 143 bits (360), Expect = 2e-32 Identities = 68/101 (67%), Positives = 80/101 (79%) Frame = +2 Query: 2 VYLLGRAGRLDKAHGLIKSMPMRPNVGVWGALLLTCQLHSNVELGEIAAQHCIEMEPDSS 181 V LLGRAGRL A+ LIKSMPM+P+ GVWGALLL C +H+NVELGEIAAQHC +E +++ Sbjct: 494 VDLLGRAGRLQDAYELIKSMPMQPHSGVWGALLLACNVHNNVELGEIAAQHCFNLETNAT 553 Query: 182 GYCSLLANIYASAERWDDAKRLRKMMEETKLTKTPGCSWME 304 Y SLLANIY+SA RWDD RLRK+ +E KL K GCSW E Sbjct: 554 AYYSLLANIYSSAGRWDDVGRLRKLWKEKKLAKLSGCSWTE 594 >ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g22760-like [Glycine max] Length = 576 Score = 140 bits (353), Expect = 2e-31 Identities = 66/99 (66%), Positives = 81/99 (81%) Frame = +2 Query: 2 VYLLGRAGRLDKAHGLIKSMPMRPNVGVWGALLLTCQLHSNVELGEIAAQHCIEMEPDSS 181 V L GRAG LD+A+ LI +MPM+PN GVWGALLL C+LH+NVELGEIA QHCI++E D++ Sbjct: 474 VDLFGRAGYLDEAYKLILNMPMQPNAGVWGALLLACRLHNNVELGEIAVQHCIKLETDTT 533 Query: 182 GYCSLLANIYASAERWDDAKRLRKMMEETKLTKTPGCSW 298 GYCSLL++IYA+ E+WDDAK+LRK ME T GCSW Sbjct: 534 GYCSLLSSIYATVEKWDDAKKLRKGMEGKDFT---GCSW 569