BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027469
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi...   159   3e-37
ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containi...   155   6e-36
emb|CBI22140.3| unnamed protein product [Vitis vinifera]              155   6e-36
ref|XP_002303536.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containi...   140   2e-31

>ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
           gi|296083555|emb|CBI23551.3| unnamed protein product
           [Vitis vinifera]
          Length = 580

 Score =  159 bits (403), Expect = 3e-37
 Identities = 73/101 (72%), Positives = 85/101 (84%)
 Frame = +2

Query: 2   VYLLGRAGRLDKAHGLIKSMPMRPNVGVWGALLLTCQLHSNVELGEIAAQHCIEMEPDSS 181
           V L GRAGRL +A  LIKSMPM+P+ GVWGALLL C+LH+NVE GEIAAQHC E+EPD++
Sbjct: 478 VDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTT 537

Query: 182 GYCSLLANIYASAERWDDAKRLRKMMEETKLTKTPGCSWME 304
           GYCSLL+NIYAS ERWDD KRLRK+ +E   +K PGCSWME
Sbjct: 538 GYCSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPGCSWME 578


>ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
          Length = 580

 Score =  155 bits (391), Expect = 6e-36
 Identities = 72/101 (71%), Positives = 84/101 (83%)
 Frame = +2

Query: 2   VYLLGRAGRLDKAHGLIKSMPMRPNVGVWGALLLTCQLHSNVELGEIAAQHCIEMEPDSS 181
           V L GRAGRL +A  LIKSMPM+P+ GVWGALLL C+LH+NVE GEIAAQHC E+EPD++
Sbjct: 478 VDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTT 537

Query: 182 GYCSLLANIYASAERWDDAKRLRKMMEETKLTKTPGCSWME 304
           GY SLL+NIYAS ERWDD KRLRK+ +E   +K PGCSWME
Sbjct: 538 GYRSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPGCSWME 578


>emb|CBI22140.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  155 bits (391), Expect = 6e-36
 Identities = 72/101 (71%), Positives = 84/101 (83%)
 Frame = +2

Query: 2   VYLLGRAGRLDKAHGLIKSMPMRPNVGVWGALLLTCQLHSNVELGEIAAQHCIEMEPDSS 181
           V L GRAGRL +A  LIKSMPM+P+ GVWGALLL C+LH+NVE GEIAAQHC E+EPD++
Sbjct: 326 VDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTT 385

Query: 182 GYCSLLANIYASAERWDDAKRLRKMMEETKLTKTPGCSWME 304
           GY SLL+NIYAS ERWDD KRLRK+ +E   +K PGCSWME
Sbjct: 386 GYRSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPGCSWME 426


>ref|XP_002303536.1| predicted protein [Populus trichocarpa] gi|222840968|gb|EEE78515.1|
           predicted protein [Populus trichocarpa]
          Length = 596

 Score =  143 bits (360), Expect = 2e-32
 Identities = 68/101 (67%), Positives = 80/101 (79%)
 Frame = +2

Query: 2   VYLLGRAGRLDKAHGLIKSMPMRPNVGVWGALLLTCQLHSNVELGEIAAQHCIEMEPDSS 181
           V LLGRAGRL  A+ LIKSMPM+P+ GVWGALLL C +H+NVELGEIAAQHC  +E +++
Sbjct: 494 VDLLGRAGRLQDAYELIKSMPMQPHSGVWGALLLACNVHNNVELGEIAAQHCFNLETNAT 553

Query: 182 GYCSLLANIYASAERWDDAKRLRKMMEETKLTKTPGCSWME 304
            Y SLLANIY+SA RWDD  RLRK+ +E KL K  GCSW E
Sbjct: 554 AYYSLLANIYSSAGRWDDVGRLRKLWKEKKLAKLSGCSWTE 594


>ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Glycine max]
          Length = 576

 Score =  140 bits (353), Expect = 2e-31
 Identities = 66/99 (66%), Positives = 81/99 (81%)
 Frame = +2

Query: 2   VYLLGRAGRLDKAHGLIKSMPMRPNVGVWGALLLTCQLHSNVELGEIAAQHCIEMEPDSS 181
           V L GRAG LD+A+ LI +MPM+PN GVWGALLL C+LH+NVELGEIA QHCI++E D++
Sbjct: 474 VDLFGRAGYLDEAYKLILNMPMQPNAGVWGALLLACRLHNNVELGEIAVQHCIKLETDTT 533

Query: 182 GYCSLLANIYASAERWDDAKRLRKMMEETKLTKTPGCSW 298
           GYCSLL++IYA+ E+WDDAK+LRK ME    T   GCSW
Sbjct: 534 GYCSLLSSIYATVEKWDDAKKLRKGMEGKDFT---GCSW 569