BLASTX nr result

ID: Coptis25_contig00027468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027468
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001058087.1| Os06g0619000 [Oryza sativa Japonica Group] g...    56   3e-06
gb|EEE66025.1| hypothetical protein OsJ_21987 [Oryza sativa Japo...    56   3e-06

>ref|NP_001058087.1| Os06g0619000 [Oryza sativa Japonica Group]
           gi|51090460|dbj|BAD35430.1| putative disease resistance
           protein [Oryza sativa Japonica Group]
           gi|113596127|dbj|BAF20001.1| Os06g0619000 [Oryza sativa
           Japonica Group]
          Length = 1171

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/54 (50%), Positives = 33/54 (61%)
 Frame = -1

Query: 172 GVVAGFPSLEELKLDGMPNLEEWSPLKDNGAEELPCLGSLIIRNCPRLIRFPSL 11
           G + GFP LEE+  DGMPN E+WS ++D     LPCL  L I  CP+L   P L
Sbjct: 841 GEMKGFPKLEEIVFDGMPNWEKWSGIEDGSL--LPCLTRLYIAKCPKLQEAPPL 892


>gb|EEE66025.1| hypothetical protein OsJ_21987 [Oryza sativa Japonica Group]
          Length = 1209

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/54 (50%), Positives = 33/54 (61%)
 Frame = -1

Query: 172 GVVAGFPSLEELKLDGMPNLEEWSPLKDNGAEELPCLGSLIIRNCPRLIRFPSL 11
           G + GFP LEE+  DGMPN E+WS ++D     LPCL  L I  CP+L   P L
Sbjct: 841 GEMKGFPKLEEIVFDGMPNWEKWSGIEDGSL--LPCLTRLYIAKCPKLQEAPPL 892


Top