BLASTX nr result

ID: Coptis25_contig00027466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027466
         (830 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266747.1| PREDICTED: U-box domain-containing protein 1...   307   2e-81
emb|CAN71048.1| hypothetical protein VITISV_006741 [Vitis vinifera]   307   2e-81
ref|XP_004168255.1| PREDICTED: U-box domain-containing protein 1...   301   1e-79
ref|XP_002308247.1| predicted protein [Populus trichocarpa] gi|2...   300   3e-79
ref|XP_004150977.1| PREDICTED: U-box domain-containing protein 1...   298   1e-78

>ref|XP_002266747.1| PREDICTED: U-box domain-containing protein 16 [Vitis vinifera]
          Length = 677

 Score =  307 bits (787), Expect = 2e-81
 Identities = 155/248 (62%), Positives = 203/248 (81%), Gaps = 3/248 (1%)
 Frame = -1

Query: 830  AGAISALVMYLTSNDSQLQINSVTTILNLSILDSNKKQVMETHGVVDGIIEVLRSGATWE 651
            AGAI  LV +L S++  LQ+N+VTT+LNLSIL++NK ++ME  G ++G+IEVLRSGATWE
Sbjct: 408  AGAIPLLVRFLGSDNPSLQVNAVTTLLNLSILEANKTRIMEIDGALNGVIEVLRSGATWE 467

Query: 650  AKENAAATIFSVCGVPEYRKKLGKKTRVVRGLVELVKEGPTSSKRDALVAILNLAGDRES 471
            AK NAAATIFS+ GV  YRK+LGKKTRV++GL++L K GP SS+RDALVAIL+LAG+R++
Sbjct: 468  AKGNAAATIFSLAGVQSYRKRLGKKTRVIKGLMDLAKGGPASSRRDALVAILSLAGERDT 527

Query: 470  VGRLIEWGVVEMAV---GAAKEFPEEVMAILAGVAKRGGVMAVVAAFRAVQTIAVVLRDG 300
            VGRLIE GVVEM +    A+ E  EE + +L  V +RGG++AV AA+ A++ ++VVLR G
Sbjct: 528  VGRLIEGGVVEMVIEVMAASPEEAEEAVTVLEVVVRRGGLVAVAAAYHAIKKLSVVLRSG 587

Query: 299  PENARENAAAGLVSVCRRGGAEAVAELASLAGIERAIWELMATGTVRARRKSASLLRILR 120
             + ARE+AAA LV++CR+GG+E VA LA++ GIER IWELM TGT R RRK+ASLLR+LR
Sbjct: 588  SDRARESAAATLVNICRKGGSETVAALAAMPGIERVIWELMGTGTERCRRKAASLLRMLR 647

Query: 119  RWAAGMDD 96
            RWAAG+D+
Sbjct: 648  RWAAGLDE 655


>emb|CAN71048.1| hypothetical protein VITISV_006741 [Vitis vinifera]
          Length = 677

 Score =  307 bits (787), Expect = 2e-81
 Identities = 155/248 (62%), Positives = 203/248 (81%), Gaps = 3/248 (1%)
 Frame = -1

Query: 830  AGAISALVMYLTSNDSQLQINSVTTILNLSILDSNKKQVMETHGVVDGIIEVLRSGATWE 651
            AGAI  LV +L S++  LQ+N+VTT+LNLSIL++NK ++ME  G ++G+IEVLRSGATWE
Sbjct: 408  AGAIPLLVRFLGSDNPSLQVNAVTTLLNLSILEANKTRIMEIDGALNGVIEVLRSGATWE 467

Query: 650  AKENAAATIFSVCGVPEYRKKLGKKTRVVRGLVELVKEGPTSSKRDALVAILNLAGDRES 471
            AK NAAATIFS+ GV  YRK+LGKKTRV++GL++L K GP SS+RDALVAIL+LAG+R++
Sbjct: 468  AKGNAAATIFSLAGVQSYRKRLGKKTRVIKGLMDLAKGGPASSRRDALVAILSLAGERDT 527

Query: 470  VGRLIEWGVVEMAV---GAAKEFPEEVMAILAGVAKRGGVMAVVAAFRAVQTIAVVLRDG 300
            VGRLIE GVVEM +    A+ E  EE + +L  V +RGG++AV AA+ A++ ++VVLR G
Sbjct: 528  VGRLIEGGVVEMVIEVMAASPEEAEEAVTVLEVVVRRGGLVAVAAAYHAIKKLSVVLRSG 587

Query: 299  PENARENAAAGLVSVCRRGGAEAVAELASLAGIERAIWELMATGTVRARRKSASLLRILR 120
             + ARE+AAA LV++CR+GG+E VA LA++ GIER IWELM TGT R RRK+ASLLR+LR
Sbjct: 588  SDRARESAAATLVNICRKGGSETVAALAAMPGIERVIWELMGTGTERCRRKAASLLRMLR 647

Query: 119  RWAAGMDD 96
            RWAAG+D+
Sbjct: 648  RWAAGLDE 655


>ref|XP_004168255.1| PREDICTED: U-box domain-containing protein 16-like [Cucumis sativus]
          Length = 689

 Score =  301 bits (771), Expect = 1e-79
 Identities = 150/244 (61%), Positives = 192/244 (78%)
 Frame = -1

Query: 830  AGAISALVMYLTSNDSQLQINSVTTILNLSILDSNKKQVMETHGVVDGIIEVLRSGATWE 651
            AGA+  LV YL S +  LQ+N+VTT+LNLSI +SNK  +MET G + G+IEVLRSGATWE
Sbjct: 411  AGALPLLVRYLNSENPILQVNAVTTVLNLSIFESNKSLIMETEGALIGVIEVLRSGATWE 470

Query: 650  AKENAAATIFSVCGVPEYRKKLGKKTRVVRGLVELVKEGPTSSKRDALVAILNLAGDRES 471
            AK NAAATIFS+  +  YR++LG+KTRV+RGL++L K+GP SSKRDALV IL LAGDRE+
Sbjct: 471  AKGNAAATIFSLSSIHSYRRRLGRKTRVIRGLLDLAKDGPISSKRDALVTILTLAGDRET 530

Query: 470  VGRLIEWGVVEMAVGAAKEFPEEVMAILAGVAKRGGVMAVVAAFRAVQTIAVVLRDGPEN 291
            VGRLIE GV+E         PEE + IL  V ++GG +A+ + F  ++ + VVLR+G + 
Sbjct: 531  VGRLIEGGVMETVSYLMNSLPEEAVTILEVVVRKGGFVAIASGFYLIKKLGVVLREGSDR 590

Query: 290  ARENAAAGLVSVCRRGGAEAVAELASLAGIERAIWELMATGTVRARRKSASLLRILRRWA 111
            +RE+AAA LV++CR+GG+E V ELAS+AGIER IWELM +GT+R RRK+ASLLRILRRWA
Sbjct: 591  SRESAAAALVTMCRQGGSEMVTELASMAGIERVIWELMGSGTMRGRRKAASLLRILRRWA 650

Query: 110  AGMD 99
            AG+D
Sbjct: 651  AGLD 654


>ref|XP_002308247.1| predicted protein [Populus trichocarpa] gi|222854223|gb|EEE91770.1|
            predicted protein [Populus trichocarpa]
          Length = 679

 Score =  300 bits (768), Expect = 3e-79
 Identities = 152/248 (61%), Positives = 198/248 (79%), Gaps = 4/248 (1%)
 Frame = -1

Query: 830  AGAISALVMYLT----SNDSQLQINSVTTILNLSILDSNKKQVMETHGVVDGIIEVLRSG 663
            AGAI  L  YL     S    LQ+N+VT +LNLSIL++NK +++E    ++G+IEVLR+G
Sbjct: 408  AGAIPVLARYLGPDIGSEFPNLQVNAVTAMLNLSILEANKTKIIENGRALNGVIEVLRTG 467

Query: 662  ATWEAKENAAATIFSVCGVPEYRKKLGKKTRVVRGLVELVKEGPTSSKRDALVAILNLAG 483
            ATWEAK NAAATIFS+ GV  YRK+LG+KTRVV+GLV+L K GP SSKRDALVAILNLAG
Sbjct: 468  ATWEAKGNAAATIFSLSGVHSYRKRLGRKTRVVKGLVDLAKSGPASSKRDALVAILNLAG 527

Query: 482  DRESVGRLIEWGVVEMAVGAAKEFPEEVMAILAGVAKRGGVMAVVAAFRAVQTIAVVLRD 303
            DRE+VGRL++ GVV+M      E PEE  A+L  V KRGG++AV AA+ A++ + V++R+
Sbjct: 528  DRETVGRLVKEGVVDMVNEVINEMPEEAAAVLEMVVKRGGIVAVAAAYNAIKKLGVLMRE 587

Query: 302  GPENARENAAAGLVSVCRRGGAEAVAELASLAGIERAIWELMATGTVRARRKSASLLRIL 123
            G +  RE+AAA LV++CR+GGA+ +AELAS+ GIER IWEL+A+GT+RARRK+++LLRIL
Sbjct: 588  GSDIVRESAAATLVTICRKGGADTIAELASIMGIERIIWELLASGTMRARRKASTLLRIL 647

Query: 122  RRWAAGMD 99
            RRWAAG+D
Sbjct: 648  RRWAAGLD 655


>ref|XP_004150977.1| PREDICTED: U-box domain-containing protein 16-like [Cucumis sativus]
          Length = 689

 Score =  298 bits (762), Expect = 1e-78
 Identities = 149/244 (61%), Positives = 191/244 (78%)
 Frame = -1

Query: 830  AGAISALVMYLTSNDSQLQINSVTTILNLSILDSNKKQVMETHGVVDGIIEVLRSGATWE 651
            AGA+  LV YL S +  LQ+N+VTT+LNLSI +SNK  +MET G + G+IEVLRSGATWE
Sbjct: 411  AGALPLLVRYLNSENPILQVNAVTTVLNLSIFESNKSLIMETEGALIGVIEVLRSGATWE 470

Query: 650  AKENAAATIFSVCGVPEYRKKLGKKTRVVRGLVELVKEGPTSSKRDALVAILNLAGDRES 471
            AK NAAATIFS+  +  YR++LG+KTRV+RGL++L K+GP SSKRDALV IL LAG RE+
Sbjct: 471  AKGNAAATIFSLSSIHSYRRRLGRKTRVIRGLLDLAKDGPISSKRDALVTILTLAGVRET 530

Query: 470  VGRLIEWGVVEMAVGAAKEFPEEVMAILAGVAKRGGVMAVVAAFRAVQTIAVVLRDGPEN 291
            VGRLIE GV+E         PEE + IL  V ++GG +A+ + F  ++ + VVLR+G + 
Sbjct: 531  VGRLIEGGVMETVSYLMNSLPEEAVTILEVVVRKGGFVAIASGFYLIKKLGVVLREGSDR 590

Query: 290  ARENAAAGLVSVCRRGGAEAVAELASLAGIERAIWELMATGTVRARRKSASLLRILRRWA 111
            +RE+AAA LV++CR+GG+E V ELAS+AGIER IWELM +GT+R RRK+ASLLRILRRWA
Sbjct: 591  SRESAAAALVTMCRQGGSEMVTELASMAGIERVIWELMGSGTMRGRRKAASLLRILRRWA 650

Query: 110  AGMD 99
            AG+D
Sbjct: 651  AGLD 654


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