BLASTX nr result

ID: Coptis25_contig00027458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027458
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634616.1| PREDICTED: uncharacterized protein LOC100852...    62   4e-08
emb|CBI39364.3| unnamed protein product [Vitis vinifera]               62   4e-08
emb|CAN64641.1| hypothetical protein VITISV_033933 [Vitis vinifera]    62   4e-08
ref|XP_002520590.1| hypothetical protein RCOM_0673190 [Ricinus c...    57   2e-06

>ref|XP_003634616.1| PREDICTED: uncharacterized protein LOC100852521 [Vitis vinifera]
          Length = 611

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   NMLEAFEPPLDMSQDIVIYEHEELEH-VPKNCFSGERNFCSGQSASTSGRTCFSEGDQTK 179
           NML+AFEPPLDMSQD  + E+  LE+ +  +  SGERN C  ++ASTSGR  F + DQ  
Sbjct: 88  NMLQAFEPPLDMSQDTDMCENPHLENALDDHLDSGERNICPCEAASTSGRISFPQSDQA- 146

Query: 180 SYKES 194
           SY +S
Sbjct: 147 SYGKS 151


>emb|CBI39364.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   NMLEAFEPPLDMSQDIVIYEHEELEH-VPKNCFSGERNFCSGQSASTSGRTCFSEGDQTK 179
           NML+AFEPPLDMSQD  + E+  LE+ +  +  SGERN C  ++ASTSGR  F + DQ  
Sbjct: 88  NMLQAFEPPLDMSQDTDMCENPHLENALDDHLDSGERNICPCEAASTSGRISFPQSDQA- 146

Query: 180 SYKES 194
           SY +S
Sbjct: 147 SYGKS 151


>emb|CAN64641.1| hypothetical protein VITISV_033933 [Vitis vinifera]
          Length = 739

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   NMLEAFEPPLDMSQDIVIYEHEELEH-VPKNCFSGERNFCSGQSASTSGRTCFSEGDQTK 179
           NML+AFEPPLDMSQD  + E+  LE+ +  +  SGERN C  ++ASTSGR  F + DQ  
Sbjct: 224 NMLQAFEPPLDMSQDTDMCENPHLENALDDHLDSGERNICPCEAASTSGRISFPQSDQA- 282

Query: 180 SYKES 194
           SY +S
Sbjct: 283 SYGKS 287


>ref|XP_002520590.1| hypothetical protein RCOM_0673190 [Ricinus communis]
           gi|223540250|gb|EEF41823.1| hypothetical protein
           RCOM_0673190 [Ricinus communis]
          Length = 91

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   NMLEAFEPPLDMSQDIVIYEHEELEHVPK-NCFSGERNFCSGQSASTSGRTCFSEGDQTK 179
           NML+AFEPPLDMSQD+   E   L H P  + FS + N CS  SAS +GR   S+ D   
Sbjct: 8   NMLQAFEPPLDMSQDMDGCEDSHLNHAPNDHVFSSQENCCSCHSASVTGRKYCSKSDGAC 67

Query: 180 SYKES 194
             +ES
Sbjct: 68  CGQES 72


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