BLASTX nr result

ID: Coptis25_contig00027439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027439
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306928.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-26
gb|ABK94224.1| unknown [Populus trichocarpa]                          119   3e-25
ref|XP_002279957.2| PREDICTED: uncharacterized protein LOC100259...   118   4e-25
ref|XP_004136491.1| PREDICTED: uncharacterized protein LOC101222...   112   4e-23
ref|XP_002510535.1| conserved hypothetical protein [Ricinus comm...   107   1e-21

>ref|XP_002306928.1| predicted protein [Populus trichocarpa] gi|222856377|gb|EEE93924.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score =  121 bits (303), Expect = 7e-26
 Identities = 58/124 (46%), Positives = 86/124 (69%)
 Frame = -3

Query: 445 SSQRERWGFVFKGLVTMLESQQEQIEKLVKQRQLFQDRFQAQQERWLSDVRLLEDQVTQW 266
           +S RE+W  VF GLV +L+SQQEQ+E L+K+R   +DR + Q ERW+SD+RL ED ++Q 
Sbjct: 11  TSDREKWDKVFGGLVKLLKSQQEQLETLLKERHFLEDRIKTQHERWVSDIRLYEDHISQI 70

Query: 265 KKKVLEEEMGRNVEIAKSELFVSLKQREALLFKLKLEHAESDLSDFRLGFDYLTHELSEK 86
              ++E++M   +E AKS+L + LKQREA L K +LE  E +L+DF+  F YL+  L   
Sbjct: 71  NGDLVEKDMACVLEAAKSDLMLGLKQREASLHKSRLEETEDELADFQAWFSYLSQNLKAN 130

Query: 85  NEKS 74
           +E++
Sbjct: 131 SEET 134


>gb|ABK94224.1| unknown [Populus trichocarpa]
          Length = 357

 Score =  119 bits (297), Expect = 3e-25
 Identities = 58/124 (46%), Positives = 84/124 (67%)
 Frame = -3

Query: 445 SSQRERWGFVFKGLVTMLESQQEQIEKLVKQRQLFQDRFQAQQERWLSDVRLLEDQVTQW 266
           +S RE+W  VF GLV  L+SQQEQ+E L+K+R   +DR + Q ERW+SD+RL ED ++Q 
Sbjct: 11  TSDREKWDKVFGGLVKSLKSQQEQLETLLKERHFLEDRIKTQHERWVSDIRLYEDHISQI 70

Query: 265 KKKVLEEEMGRNVEIAKSELFVSLKQREALLFKLKLEHAESDLSDFRLGFDYLTHELSEK 86
               +E++M   +E AKS+L + LKQREA L K +LE  E +L+DF+  F YL+  L   
Sbjct: 71  NGDSVEKDMACVLEAAKSDLMLGLKQREASLHKSRLEETEDELADFQAWFSYLSQNLKAN 130

Query: 85  NEKS 74
           +E++
Sbjct: 131 SEET 134


>ref|XP_002279957.2| PREDICTED: uncharacterized protein LOC100259217 [Vitis vinifera]
           gi|302142661|emb|CBI19864.3| unnamed protein product
           [Vitis vinifera]
          Length = 379

 Score =  118 bits (296), Expect = 4e-25
 Identities = 63/147 (42%), Positives = 94/147 (63%), Gaps = 5/147 (3%)
 Frame = -3

Query: 445 SSQRERWGFVFKGLVTMLESQQEQIEKLVKQRQLFQDRFQAQQERWLSDVRLLEDQVTQW 266
           SS R++W  +F  LV ML++QQ Q+E L K+R+L +DR + Q +RW+SDV  L+DQ+ Q 
Sbjct: 10  SSDRQKWQKIFNALVHMLQTQQTQVESLAKERKLLEDRIKFQYDRWISDVHSLQDQIAQM 69

Query: 265 KKKVLEEEMGRNVEIAKSELFVSLKQREALLFKLKLEHAESDLSDFRLGFDYLTHELSEK 86
           + K   +E  R VE AKS+L + LK+RE  L KLKLE  + +L DF++  D+L+HE  + 
Sbjct: 70  EMKFTVQEKERLVEAAKSDLLMGLKKREVSLCKLKLESTDDELVDFKVLIDFLSHECLDP 129

Query: 85  NEKSQVIYKNQ-----SNVKDGKDGRE 20
           N  S+V  K +     +N+K  K  +E
Sbjct: 130 NGISKVGDKEKGSRGDNNLKSVKTTKE 156


>ref|XP_004136491.1| PREDICTED: uncharacterized protein LOC101222062 [Cucumis sativus]
           gi|449505782|ref|XP_004162567.1| PREDICTED:
           uncharacterized LOC101222062 [Cucumis sativus]
          Length = 365

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/126 (41%), Positives = 85/126 (67%), Gaps = 1/126 (0%)
 Frame = -3

Query: 454 SPQSSQRERWGFVFKGLVTMLESQQEQIEKLVKQRQLFQDRFQAQQERWLSDVRLLEDQV 275
           S  S +R  WG +F GL  ML +QQ Q+E LV +R+L +DR + Q ERW++D+RL ED V
Sbjct: 7   SKPSIERRNWGKIFNGLTQMLRTQQNQLETLVTERKLLEDRVKMQHERWVADIRLYEDHV 66

Query: 274 TQWKKKVLEEEMGRNVEIAKSELFVSLKQREALLFKLKLEHAESDLSDFRLGF-DYLTHE 98
           +Q + ++  ++M R+ + +KS+L   +KQ E  + +LK+EH+E++L DF+  F D++ H+
Sbjct: 67  SQMRDELFLQDMERSFQASKSDLLAGMKQTELYVCRLKIEHSEAELEDFKSFFDDFIAHK 126

Query: 97  LSEKNE 80
            S+  E
Sbjct: 127 NSKLQE 132


>ref|XP_002510535.1| conserved hypothetical protein [Ricinus communis]
           gi|223551236|gb|EEF52722.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 354

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/115 (44%), Positives = 81/115 (70%)
 Frame = -3

Query: 418 VFKGLVTMLESQQEQIEKLVKQRQLFQDRFQAQQERWLSDVRLLEDQVTQWKKKVLEEEM 239
           +F  LV +L++QQEQ++ L+++R+  +DR ++Q ERW SDVRL ED ++Q    ++E+++
Sbjct: 12  LFNNLVQILKNQQEQLKTLLEERKFLEDRIKSQHERWASDVRLCEDHISQMNDALMEKDL 71

Query: 238 GRNVEIAKSELFVSLKQREALLFKLKLEHAESDLSDFRLGFDYLTHELSEKNEKS 74
              ++ AKS L + LK REA L+KLKLE  E +L+DFR  F+YL+  L E  ++S
Sbjct: 72  NCLLQAAKSNLMLGLKHREASLYKLKLEQTEDELADFRSCFNYLSQILEENPKES 126


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