BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027435
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_003533097.1| PREDICTED: B3 domain-containing transcriptio...    80   1e-13
dbj|BAJ34322.1| unnamed protein product [Thellungiella halophila]      77   1e-12
ref|XP_003537916.1| PREDICTED: B3 domain-containing transcriptio...    77   2e-12
gb|AAR92199.1| reduced vernalization response 1 [Brassica rapa]        76   2e-12

>ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|222871344|gb|EEF08475.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 46/113 (40%), Positives = 75/113 (66%), Gaps = 1/113 (0%)
 Frame = -1

Query: 337 RKPAEIKGKDGVTQTASSFKSKHPFFQIVLTPSYVNKGYL-HIPSTFWRRYLPEGLKTLT 161
           R+    + K+   + A  F+S +PFF+++L PSYV +G+L HIPS+F R +L      +T
Sbjct: 190 RRAVTPEEKERTIRAAHMFRSDNPFFRVILRPSYVYRGFLLHIPSSFARTFLNTVTGFVT 249

Query: 160 LQVANGRKKWLVRCSSFPGILRISQGFHLFILESHIKIGDICVFEQIKRKDVV 2
           LQV++G K+W VRCS   G  ++ QG+  F+ E++++ GD+C+FE I  K++V
Sbjct: 250 LQVSDG-KQWPVRCSFKDGKAKLGQGWTEFVWENNLEEGDVCIFELIHAKEIV 301


>ref|XP_003533097.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Glycine max]
          Length = 430

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/109 (36%), Positives = 67/109 (61%)
 Frame = -1

Query: 340 TRKPAEIKGKDGVTQTASSFKSKHPFFQIVLTPSYVNKGYLHIPSTFWRRYLPEGLKTLT 161
           T  P   +      + AS+F+S+HPFF++V+ PS++N  YL IP  F  RYL +    + 
Sbjct: 205 TEYPKVEQSTSTALKKASTFRSEHPFFRLVMKPSFINGYYLEIPPQFAERYLKKTHAIVI 264

Query: 160 LQVANGRKKWLVRCSSFPGILRISQGFHLFILESHIKIGDICVFEQIKR 14
           L++ +GR  W V CS+     R+++G+  F  E+++ +GD+CVFE I++
Sbjct: 265 LEILDGR-TWSVICSA----TRLTEGWQKFASENNLNVGDVCVFELIQK 308


>dbj|BAJ34322.1| unnamed protein product [Thellungiella halophila]
          Length = 226

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/117 (35%), Positives = 69/117 (58%), Gaps = 1/117 (0%)
 Frame = -1

Query: 349 ALGTRKPAEIKGKDGVTQTASSFKSKHPFFQIVLTPSYVNKG-YLHIPSTFWRRYLPEGL 173
           A   ++    + ++     A +F+  +PFF++VL PSY+ +G  +++PS F  +YL    
Sbjct: 100 ASARKRTVTAEERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGIS 159

Query: 172 KTLTLQVANGRKKWLVRCSSFPGILRISQGFHLFILESHIKIGDICVFEQIKRKDVV 2
             + LQ+  G K+W VRC    G  + SQG++ F LE++I  GD+CVFE +K +D V
Sbjct: 160 GFIKLQL--GEKQWPVRCLYKAGRAKFSQGWYEFTLENNIGEGDVCVFELLKTRDFV 214


>ref|XP_003537916.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Glycine max]
          Length = 431

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/117 (35%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
 Frame = -1

Query: 349 ALGTRKPAEIKGKDGVTQTASSFKSKHPFFQIVLTPSYVNKG-YLHIPSTFWRRYLPEGL 173
           A   ++    + ++ V   A +F+  +PF ++VL PSY+ +G  +++PS F  ++L    
Sbjct: 269 ASARKRTVTAEERERVINEAKAFEPSNPFCRVVLRPSYLYRGCIMYLPSCFAEKHLNGVS 328

Query: 172 KTLTLQVANGRKKWLVRCSSFPGILRISQGFHLFILESHIKIGDICVFEQIKRKDVV 2
             + LQ++NGR+ W VRC    G  ++SQG+  F LE+++  GD+CVFE ++ K+VV
Sbjct: 329 GFIKLQISNGRQ-WPVRCLYKGGRAKLSQGWFEFSLENNLGEGDVCVFELLRMKEVV 384


>gb|AAR92199.1| reduced vernalization response 1 [Brassica rapa]
          Length = 329

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/132 (31%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
 Frame = -1

Query: 391 PKQDGVDSNA-IRNIALGTRKPAEIKGKDGVTQTASSFKSKHPFFQIVLTPSYVNKG-YL 218
           P+ D  +S +     A   ++    + ++     A +F+  +PFF++VL PSY+ +G  +
Sbjct: 188 PRDDDPESRSKFYESASARKRTVNAEERERAVNAAKTFEPTNPFFRVVLRPSYLYRGCIM 247

Query: 217 HIPSTFWRRYLPEGLKTLTLQVANGRKKWLVRCSSFPGILRISQGFHLFILESHIKIGDI 38
           ++PS F  +YL  G+    ++V  G K+W VRC    G  + SQG++ F +E+++  GD+
Sbjct: 248 YLPSGFAEKYL-SGISGF-IKVQLGEKQWPVRCLYKAGRAKFSQGWYEFTVENNLGEGDV 305

Query: 37  CVFEQIKRKDVV 2
           CVFE ++ +D V
Sbjct: 306 CVFELLRTRDFV 317