BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027429
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334407.1| predicted protein [Populus trichocarpa] gi|2...    50   3e-07
ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containi...    43   4e-06

>ref|XP_002334407.1| predicted protein [Populus trichocarpa] gi|222872045|gb|EEF09176.1|
           predicted protein [Populus trichocarpa]
          Length = 513

 Score = 50.1 bits (118), Expect(2) = 3e-07
 Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
 Frame = -1

Query: 242 LNPQRNIDFFK*ASLRHNYKHSVDTYGEIF---IRLSSRVS**D*TID*VNEGLVVDSVT 72
           L+  + ++FFK  S+RH YKHSV TY ++F    R        D      N+G+VV S T
Sbjct: 43  LDSSKKMEFFKWCSVRHIYKHSVSTYSQMFSTLCRSGYLEEVPDLLNSMKNDGVVVGSET 102

Query: 71  FKVLLDAFNHS 39
           FK+LLDAF  S
Sbjct: 103 FKLLLDAFIRS 113



 Score = 29.6 bits (65), Expect(2) = 3e-07
 Identities = 13/29 (44%), Positives = 23/29 (79%)
 Frame = -3

Query: 345 IASVSKSLIETDIHNLNADTMPLSQSLVL 259
           +A ++K+L E+   +L+ D++PLS+SLVL
Sbjct: 7   VAYLTKTLSESGTRSLDPDSIPLSESLVL 35


>ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
           [Vitis vinifera]
          Length = 792

 Score = 42.7 bits (99), Expect(3) = 4e-06
 Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
 Frame = -1

Query: 230 RNIDFFK*ASLRHNYKHSVDTYGEIFIRLSSRVS**D*TID*V--------NEGLVVDSV 75
           R ++FF+  S RHNYKHSV  Y  IF R+  R       +D V        ++G+VV   
Sbjct: 65  RKVEFFRWCSFRHNYKHSVGAYSHIF-RIVCRAG--AEFLDQVPLLMSSMKDDGVVVGQE 121

Query: 74  TFKVLLDA 51
           TFK+LLD+
Sbjct: 122 TFKLLLDS 129



 Score = 26.9 bits (58), Expect(3) = 4e-06
 Identities = 11/29 (37%), Positives = 22/29 (75%)
 Frame = -3

Query: 345 IASVSKSLIETDIHNLNADTMPLSQSLVL 259
           +AS+SK+L E    + + +++P+S+SLV+
Sbjct: 25  VASISKTLSERGTRSPDLESIPISESLVV 53



 Score = 25.4 bits (54), Expect(3) = 4e-06
 Identities = 10/15 (66%), Positives = 14/15 (93%)
 Frame = -2

Query: 46  IIRSGKFELAIEILD 2
           +IR+GKF+ A+EILD
Sbjct: 130 LIRAGKFDSALEILD 144