BLASTX nr result

ID: Coptis25_contig00027395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027395
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278498.1| PREDICTED: DTW domain-containing protein 2-l...   120   1e-25
gb|ADE75953.1| unknown [Picea sitchensis]                             115   3e-24
ref|XP_004149400.1| PREDICTED: DTW domain-containing protein 2-l...    93   3e-17
ref|XP_004163694.1| PREDICTED: LOW QUALITY PROTEIN: DTW domain-c...    92   6e-17
ref|XP_001774184.1| predicted protein [Physcomitrella patens sub...    91   1e-16

>ref|XP_002278498.1| PREDICTED: DTW domain-containing protein 2-like [Vitis vinifera]
          Length = 254

 Score =  120 bits (300), Expect = 1e-25
 Identities = 58/96 (60%), Positives = 72/96 (75%)
 Frame = +2

Query: 74  RQICSKGCARPANVCLCNVLPKQPILTSTKLVILHHPHEHRHKLATVPILTKCLTNCQIK 253
           R+IC   C+RP NVCLC  LP +PI T+T++VILHHPHEHRHKL+TVPILTKCL N    
Sbjct: 31  RRICDN-CSRPENVCLCGSLPSEPISTATQIVILHHPHEHRHKLSTVPILTKCLLNTHTI 89

Query: 254 IGRRLRSASFSFLDSLYNASVMDPLLPHHAVFLFPG 361
           +GRRLR  S + LDSL+++S  D L    A++LFPG
Sbjct: 90  VGRRLRHGSSAMLDSLHSSSSTDQL--PRAIYLFPG 123


>gb|ADE75953.1| unknown [Picea sitchensis]
          Length = 264

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/105 (50%), Positives = 71/105 (67%)
 Frame = +2

Query: 53  QPNQNKPRQICSKGCARPANVCLCNVLPKQPILTSTKLVILHHPHEHRHKLATVPILTKC 232
           +  Q + R+ C  GC RPANVCLCNVLP + + TST+++IL HPHE RHKL+TVP++ KC
Sbjct: 7   EQKQKQQREKCRGGCERPANVCLCNVLPSEALETSTRIIILQHPHELRHKLSTVPLIQKC 66

Query: 233 LTNCQIKIGRRLRSASFSFLDSLYNASVMDPLLPHHAVFLFPGTE 367
           L N Q+ +GRRL   S   LD++ + S  +     H +FLFPG E
Sbjct: 67  LHNSQVIVGRRLHMGSSPILDAICSQSDAEKSKCGHVLFLFPGEE 111


>ref|XP_004149400.1| PREDICTED: DTW domain-containing protein 2-like [Cucumis sativus]
          Length = 246

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 49/97 (50%), Positives = 55/97 (56%)
 Frame = +2

Query: 74  RQICSKGCARPANVCLCNVLPKQPILTSTKLVILHHPHEHRHKLATVPILTKCLTNCQIK 253
           R ICS  C RP  VCLC  LP  PI T TK++IL HPHE +HKL+T PILTKCL N    
Sbjct: 22  RSICSN-CNRPQPVCLCKFLPSPPIATKTKIIILQHPHESQHKLSTTPILTKCLLNATTI 80

Query: 254 IGRRLRSASFSFLDSLYNASVMDPLLPHHAVFLFPGT 364
           + RRL+      LD              HAVFLFP T
Sbjct: 81  VNRRLKPGLSKLLDQ-----------SPHAVFLFPPT 106


>ref|XP_004163694.1| PREDICTED: LOW QUALITY PROTEIN: DTW domain-containing protein
           2-like [Cucumis sativus]
          Length = 246

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 49/97 (50%), Positives = 54/97 (55%)
 Frame = +2

Query: 74  RQICSKGCARPANVCLCNVLPKQPILTSTKLVILHHPHEHRHKLATVPILTKCLTNCQIK 253
           R ICS  C RP  VCLC  LP  PI T TK +IL HPHE +HKL+T PILTKCL N    
Sbjct: 22  RSICSN-CNRPQPVCLCKFLPSPPIATKTKXIILQHPHESQHKLSTTPILTKCLLNATTI 80

Query: 254 IGRRLRSASFSFLDSLYNASVMDPLLPHHAVFLFPGT 364
           + RRL+      LD              HAVFLFP T
Sbjct: 81  VNRRLKPGLSKLLDQ-----------SPHAVFLFPPT 106


>ref|XP_001774184.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162674452|gb|EDQ60960.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 227

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/98 (46%), Positives = 64/98 (65%)
 Frame = +2

Query: 74  RQICSKGCARPANVCLCNVLPKQPILTSTKLVILHHPHEHRHKLATVPILTKCLTNCQIK 253
           R IC  GC RP +VCLC+V+P  P    T+L+IL HPHE +HKLATVP+L++C+  C + 
Sbjct: 1   RPICL-GCVRPLSVCLCDVMPSPPPHLRTRLLILQHPHELKHKLATVPVLSRCVHPCHVI 59

Query: 254 IGRRLRSASFSFLDSLYNASVMDPLLPHHAVFLFPGTE 367
           +GRRL SA++ F  SL + +       HH + LFP  +
Sbjct: 60  VGRRLHSANWPF--SLSDDAEAG---AHHTLLLFPAPD 92


Top