BLASTX nr result

ID: Coptis25_contig00027394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027394
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002437246.1| hypothetical protein SORBIDRAFT_10g023460 [S...   149   5e-34
ref|NP_001236789.1| uncharacterized protein LOC100305539 [Glycin...   148   6e-34
ref|XP_002285115.1| PREDICTED: uncharacterized protein At2g34160...   148   6e-34
ref|XP_002515535.1| conserved hypothetical protein [Ricinus comm...   147   1e-33
dbj|BAJ98262.1| predicted protein [Hordeum vulgare subsp. vulgar...   147   1e-33

>ref|XP_002437246.1| hypothetical protein SORBIDRAFT_10g023460 [Sorghum bicolor]
           gi|241915469|gb|EER88613.1| hypothetical protein
           SORBIDRAFT_10g023460 [Sorghum bicolor]
          Length = 129

 Score =  149 bits (375), Expect = 5e-34
 Identities = 78/120 (65%), Positives = 96/120 (80%), Gaps = 5/120 (4%)
 Frame = +3

Query: 69  VEGITEGVENMTVNDTLKKNRIQVSNTKNSIFHYVNLAKKIMKQHNEVELSALGMAIASV 248
           +E +TEGV N+ + +  KKNRIQVSNTK  +F YVNLAK+ M+QH EVELSALGMAIA+V
Sbjct: 1   MEEVTEGVNNLAITEPHKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATV 60

Query: 249 VSISEILKSNGFAVEKKIFTSTVEMND-----AIRKAKIAIVLGKSDKFDELMGAAEV*R 413
           V+++EILK+NG AVEKKI TSTV++ D      I+KAKI IVLGK+DKFDELM AA+  R
Sbjct: 61  VTVAEILKNNGLAVEKKIMTSTVDVKDDTRARPIQKAKIEIVLGKTDKFDELMAAADAER 120


>ref|NP_001236789.1| uncharacterized protein LOC100305539 [Glycine max]
           gi|255625853|gb|ACU13271.1| unknown [Glycine max]
          Length = 144

 Score =  148 bits (374), Expect = 6e-34
 Identities = 76/117 (64%), Positives = 97/117 (82%), Gaps = 5/117 (4%)
 Frame = +3

Query: 66  AVEGITEGVENMTVNDTLKKNRIQVSNTKNSIFHYVNLAKKIMKQHNEVELSALGMAIAS 245
           A+E ITEGV N+ ++D+ KKNRIQVSNTK  +F YVNLAK+ M+QHNEVELSALGMAIA+
Sbjct: 11  AMEAITEGVNNINISDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT 70

Query: 246 VVSISEILKSNGFAVEKKIFTSTVEMND-----AIRKAKIAIVLGKSDKFDELMGAA 401
           VV+++EILK+N  A+EKKI TSTV++ D      ++KAKI I+LGK++KFDELM AA
Sbjct: 71  VVTVAEILKNNELAIEKKITTSTVDIKDDSRGRPVQKAKIEILLGKTEKFDELMAAA 127


>ref|XP_002285115.1| PREDICTED: uncharacterized protein At2g34160 [Vitis vinifera]
           gi|297738936|emb|CBI28181.3| unnamed protein product
           [Vitis vinifera]
          Length = 130

 Score =  148 bits (374), Expect = 6e-34
 Identities = 79/116 (68%), Positives = 95/116 (81%), Gaps = 5/116 (4%)
 Frame = +3

Query: 69  VEGITEGVENMTVNDTLKKNRIQVSNTKNSIFHYVNLAKKIMKQHNEVELSALGMAIASV 248
           +E ITEGV +M + D+ KKNRIQVSNTK  +F YVNLAK+ M+QHNEVELSALGMAIA+V
Sbjct: 1   MEEITEGVNSMNIADSHKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATV 60

Query: 249 VSISEILKSNGFAVEKKIFTSTVEMND-----AIRKAKIAIVLGKSDKFDELMGAA 401
           V+I+EILK+NG AVEKKI TSTV+M D      I+KAKI I+LGK++ FDELM AA
Sbjct: 61  VTIAEILKNNGLAVEKKIMTSTVDMKDESRGRPIQKAKIEILLGKTENFDELMAAA 116


>ref|XP_002515535.1| conserved hypothetical protein [Ricinus communis]
           gi|223545479|gb|EEF46984.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 128

 Score =  147 bits (372), Expect = 1e-33
 Identities = 78/117 (66%), Positives = 95/117 (81%), Gaps = 6/117 (5%)
 Frame = +3

Query: 69  VEGITEGVENMTVNDTL-KKNRIQVSNTKNSIFHYVNLAKKIMKQHNEVELSALGMAIAS 245
           +E +TEGV NM +ND   KKNRIQVSNTK  +F YVNLAK+ M+QHNEVELSALGMAIA+
Sbjct: 1   MEAVTEGVNNMNINDASNKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT 60

Query: 246 VVSISEILKSNGFAVEKKIFTSTVEMND-----AIRKAKIAIVLGKSDKFDELMGAA 401
           VV+I+EILK+NG A+EKKI TSTV+M +      + KAKI I+LGK++KFDELM AA
Sbjct: 61  VVTIAEILKNNGLAIEKKIMTSTVDMREDTGGRPVPKAKIEILLGKTEKFDELMAAA 117


>dbj|BAJ98262.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326521236|dbj|BAJ96821.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 132

 Score =  147 bits (371), Expect = 1e-33
 Identities = 77/116 (66%), Positives = 94/116 (81%), Gaps = 5/116 (4%)
 Frame = +3

Query: 69  VEGITEGVENMTVNDTLKKNRIQVSNTKNSIFHYVNLAKKIMKQHNEVELSALGMAIASV 248
           +E +TEGV+N+ V +  KKNRIQVSNTK  +F YVNLAK+ M+ HNEVELSALGMAIA+V
Sbjct: 1   MEEVTEGVKNLAVTEPQKKNRIQVSNTKKPLFFYVNLAKRYMQMHNEVELSALGMAIATV 60

Query: 249 VSISEILKSNGFAVEKKIFTSTVEMNDAIR-----KAKIAIVLGKSDKFDELMGAA 401
           V+++EILK+NG AVEKKI TSTV++ND  R     KAKI IVLGK++ FDELM AA
Sbjct: 61  VTVAEILKNNGLAVEKKIMTSTVDVNDESRGRPMQKAKIEIVLGKTENFDELMAAA 116


Top