BLASTX nr result
ID: Coptis25_contig00027378
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00027378 (174 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK25119.1| unknown [Picea sitchensis] 107 1e-21 gb|ABS01433.1| eukaryotic translation initiation factor [Artemis... 105 4e-21 ref|XP_003603240.1| Eukaryotic translation initiation factor 3 s... 102 4e-20 ref|XP_002285591.1| PREDICTED: eukaryotic translation initiation... 102 4e-20 emb|CAN76773.1| hypothetical protein VITISV_017587 [Vitis vinifera] 102 4e-20 >gb|ABK25119.1| unknown [Picea sitchensis] Length = 724 Score = 107 bits (267), Expect = 1e-21 Identities = 47/57 (82%), Positives = 49/57 (85%) Frame = -3 Query: 172 DVEWDPTGRYVATSVTAVHEMENGFYIWSFTGKLLYHIPRDHLYQLLWRPRPASHLT 2 D+EWDPTGRY ATSVT VHEMENGF IWSF GKLLY IPRDH YQLLWRPRP S L+ Sbjct: 565 DIEWDPTGRYAATSVTVVHEMENGFNIWSFNGKLLYRIPRDHFYQLLWRPRPPSLLS 621 >gb|ABS01433.1| eukaryotic translation initiation factor [Artemisia annua] Length = 236 Score = 105 bits (262), Expect = 4e-21 Identities = 45/57 (78%), Positives = 50/57 (87%) Frame = -3 Query: 172 DVEWDPTGRYVATSVTAVHEMENGFYIWSFTGKLLYHIPRDHLYQLLWRPRPASHLT 2 D+EWDP+GRYVATSVT+VHEMENGF IWSF GKLLYHI +DH +Q LWRPRP S LT Sbjct: 82 DIEWDPSGRYVATSVTSVHEMENGFNIWSFNGKLLYHIMKDHFFQFLWRPRPPSFLT 138 >ref|XP_003603240.1| Eukaryotic translation initiation factor 3 subunit B [Medicago truncatula] gi|355492288|gb|AES73491.1| Eukaryotic translation initiation factor 3 subunit B [Medicago truncatula] Length = 731 Score = 102 bits (253), Expect = 4e-20 Identities = 45/57 (78%), Positives = 49/57 (85%) Frame = -3 Query: 172 DVEWDPTGRYVATSVTAVHEMENGFYIWSFTGKLLYHIPRDHLYQLLWRPRPASHLT 2 DVEWDPTGRYVAT+VT+VHEMENGF IWSF GK LY I +DH +Q LWRPRPAS LT Sbjct: 575 DVEWDPTGRYVATAVTSVHEMENGFNIWSFNGKHLYRILKDHFFQFLWRPRPASFLT 631 >ref|XP_002285591.1| PREDICTED: eukaryotic translation initiation factor 3 subunit B [Vitis vinifera] gi|296082169|emb|CBI21174.3| unnamed protein product [Vitis vinifera] Length = 718 Score = 102 bits (253), Expect = 4e-20 Identities = 44/57 (77%), Positives = 49/57 (85%) Frame = -3 Query: 172 DVEWDPTGRYVATSVTAVHEMENGFYIWSFTGKLLYHIPRDHLYQLLWRPRPASHLT 2 D+EWDPTGRYVATSVT+VHEMENGF IWSF GKLLY I +DH +Q LWRPRP S L+ Sbjct: 560 DIEWDPTGRYVATSVTSVHEMENGFNIWSFNGKLLYRILKDHFFQFLWRPRPPSFLS 616 >emb|CAN76773.1| hypothetical protein VITISV_017587 [Vitis vinifera] Length = 719 Score = 102 bits (253), Expect = 4e-20 Identities = 44/57 (77%), Positives = 49/57 (85%) Frame = -3 Query: 172 DVEWDPTGRYVATSVTAVHEMENGFYIWSFTGKLLYHIPRDHLYQLLWRPRPASHLT 2 D+EWDPTGRYVATSVT+VHEMENGF IWSF GKLLY I +DH +Q LWRPRP S L+ Sbjct: 560 DIEWDPTGRYVATSVTSVHEMENGFNIWSFNGKLLYRILKDHFFQFLWRPRPPSFLS 616