BLASTX nr result

ID: Coptis25_contig00027378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027378
         (174 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25119.1| unknown [Picea sitchensis]                             107   1e-21
gb|ABS01433.1| eukaryotic translation initiation factor [Artemis...   105   4e-21
ref|XP_003603240.1| Eukaryotic translation initiation factor 3 s...   102   4e-20
ref|XP_002285591.1| PREDICTED: eukaryotic translation initiation...   102   4e-20
emb|CAN76773.1| hypothetical protein VITISV_017587 [Vitis vinifera]   102   4e-20

>gb|ABK25119.1| unknown [Picea sitchensis]
          Length = 724

 Score =  107 bits (267), Expect = 1e-21
 Identities = 47/57 (82%), Positives = 49/57 (85%)
 Frame = -3

Query: 172 DVEWDPTGRYVATSVTAVHEMENGFYIWSFTGKLLYHIPRDHLYQLLWRPRPASHLT 2
           D+EWDPTGRY ATSVT VHEMENGF IWSF GKLLY IPRDH YQLLWRPRP S L+
Sbjct: 565 DIEWDPTGRYAATSVTVVHEMENGFNIWSFNGKLLYRIPRDHFYQLLWRPRPPSLLS 621


>gb|ABS01433.1| eukaryotic translation initiation factor [Artemisia annua]
          Length = 236

 Score =  105 bits (262), Expect = 4e-21
 Identities = 45/57 (78%), Positives = 50/57 (87%)
 Frame = -3

Query: 172 DVEWDPTGRYVATSVTAVHEMENGFYIWSFTGKLLYHIPRDHLYQLLWRPRPASHLT 2
           D+EWDP+GRYVATSVT+VHEMENGF IWSF GKLLYHI +DH +Q LWRPRP S LT
Sbjct: 82  DIEWDPSGRYVATSVTSVHEMENGFNIWSFNGKLLYHIMKDHFFQFLWRPRPPSFLT 138


>ref|XP_003603240.1| Eukaryotic translation initiation factor 3 subunit B [Medicago
           truncatula] gi|355492288|gb|AES73491.1| Eukaryotic
           translation initiation factor 3 subunit B [Medicago
           truncatula]
          Length = 731

 Score =  102 bits (253), Expect = 4e-20
 Identities = 45/57 (78%), Positives = 49/57 (85%)
 Frame = -3

Query: 172 DVEWDPTGRYVATSVTAVHEMENGFYIWSFTGKLLYHIPRDHLYQLLWRPRPASHLT 2
           DVEWDPTGRYVAT+VT+VHEMENGF IWSF GK LY I +DH +Q LWRPRPAS LT
Sbjct: 575 DVEWDPTGRYVATAVTSVHEMENGFNIWSFNGKHLYRILKDHFFQFLWRPRPASFLT 631


>ref|XP_002285591.1| PREDICTED: eukaryotic translation initiation factor 3 subunit B
           [Vitis vinifera] gi|296082169|emb|CBI21174.3| unnamed
           protein product [Vitis vinifera]
          Length = 718

 Score =  102 bits (253), Expect = 4e-20
 Identities = 44/57 (77%), Positives = 49/57 (85%)
 Frame = -3

Query: 172 DVEWDPTGRYVATSVTAVHEMENGFYIWSFTGKLLYHIPRDHLYQLLWRPRPASHLT 2
           D+EWDPTGRYVATSVT+VHEMENGF IWSF GKLLY I +DH +Q LWRPRP S L+
Sbjct: 560 DIEWDPTGRYVATSVTSVHEMENGFNIWSFNGKLLYRILKDHFFQFLWRPRPPSFLS 616


>emb|CAN76773.1| hypothetical protein VITISV_017587 [Vitis vinifera]
          Length = 719

 Score =  102 bits (253), Expect = 4e-20
 Identities = 44/57 (77%), Positives = 49/57 (85%)
 Frame = -3

Query: 172 DVEWDPTGRYVATSVTAVHEMENGFYIWSFTGKLLYHIPRDHLYQLLWRPRPASHLT 2
           D+EWDPTGRYVATSVT+VHEMENGF IWSF GKLLY I +DH +Q LWRPRP S L+
Sbjct: 560 DIEWDPTGRYVATSVTSVHEMENGFNIWSFNGKLLYRILKDHFFQFLWRPRPPSFLS 616


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