BLASTX nr result

ID: Coptis25_contig00027361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027361
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525423.1| conserved hypothetical protein [Ricinus comm...    82   6e-14
ref|XP_002319693.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_002297620.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
gb|ABK22240.1| unknown [Picea sitchensis]                              81   8e-14
ref|XP_002303987.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12

>ref|XP_002525423.1| conserved hypothetical protein [Ricinus communis]
           gi|223535236|gb|EEF36913.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 84

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/59 (64%), Positives = 47/59 (79%)
 Frame = -1

Query: 441 MVFNSILVVTVAKISAHVWQFIACNPERLSSEQVLDLICCLPLQQLGRLAFCLWTFFCF 265
           MV NS +VV VA ISA+V Q+IACNPERLSS+QVL+L+ CLPL+  GRLA  LW + C+
Sbjct: 1   MVLNSNVVVRVANISANVCQYIACNPERLSSDQVLNLLFCLPLRHFGRLALSLWNYLCY 59


>ref|XP_002319693.1| predicted protein [Populus trichocarpa] gi|222858069|gb|EEE95616.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/59 (61%), Positives = 46/59 (77%)
 Frame = -1

Query: 441 MVFNSILVVTVAKISAHVWQFIACNPERLSSEQVLDLICCLPLQQLGRLAFCLWTFFCF 265
           MV NS L+VT+A +SA++ Q+IACNPERLSS+QVL L+ CLPL   GRLA   WT+ C+
Sbjct: 1   MVLNSSLMVTIANVSANLCQYIACNPERLSSDQVLHLLFCLPLHHFGRLALSFWTYLCY 59


>ref|XP_002297620.1| predicted protein [Populus trichocarpa] gi|222844878|gb|EEE82425.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/60 (63%), Positives = 48/60 (80%), Gaps = 2/60 (3%)
 Frame = -1

Query: 441 MVFNSILVVTVAKISAHVWQFIACN--PERLSSEQVLDLICCLPLQQLGRLAFCLWTFFC 268
           MVFNS++V++VA +SA VWQ IAC    +R+SS Q+LDL+CC PLQQLGRLA  +WTF C
Sbjct: 1   MVFNSLIVLSVAHVSADVWQQIACIRFQDRVSSHQLLDLVCCFPLQQLGRLALFVWTFLC 60


>gb|ABK22240.1| unknown [Picea sitchensis]
          Length = 87

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 35/58 (60%), Positives = 46/58 (79%)
 Frame = -1

Query: 441 MVFNSILVVTVAKISAHVWQFIACNPERLSSEQVLDLICCLPLQQLGRLAFCLWTFFC 268
           MVFN+ ++V+VA  SA   Q ++CNPERLSS+ VL L+CCLP +QLGRL  C+W+FFC
Sbjct: 1   MVFNTPIIVSVATWSASACQSLSCNPERLSSDHVLSLLCCLPYRQLGRLVVCVWSFFC 58


>ref|XP_002303987.1| predicted protein [Populus trichocarpa] gi|222841419|gb|EEE78966.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/60 (58%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
 Frame = -1

Query: 441 MVFNSILVVTVAKISAHVWQFIACN--PERLSSEQVLDLICCLPLQQLGRLAFCLWTFFC 268
           MVFNS++V++VA  SA VWQ IAC    +++SS Q+LDL+CC PLQQLGR +  +WTF C
Sbjct: 1   MVFNSLIVLSVAHKSADVWQQIACMGLQDQVSSHQLLDLVCCFPLQQLGRFSLYIWTFLC 60


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