BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027341
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299277.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_002892238.1| AAA-type ATPase family protein [Arabidopsis ...   125   5e-27
ref|XP_002518124.1| chromosome transmission fidelity factor, put...   125   5e-27
gb|AAB80633.1| Similar to Saccharomyces CHL12 (gb|Z49259) [Arabi...   123   2e-26
ref|NP_171966.2| chromosome transmission fidelity protein 18 [Ar...   123   2e-26

>ref|XP_002299277.1| predicted protein [Populus trichocarpa] gi|222846535|gb|EEE84082.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/81 (75%), Positives = 70/81 (86%)
 Frame = +1

Query: 13  ETPGVSEKLWVEKYAPNSFTELLSDEQTNREVLLWLKQWDSGVFGSDIRSTKDDVLSSLR 192
           ET  + EKLWV+KYAPNSFTELLSDEQTNREVLLW KQWDS VFGSDIRST DD+LS+LR
Sbjct: 209 ETQVMHEKLWVDKYAPNSFTELLSDEQTNREVLLWFKQWDSCVFGSDIRSTSDDILSALR 268

Query: 193 RHSTVTHHKKLSDTSFTSKNR 255
           RHS++  H K SD++F SKN+
Sbjct: 269 RHSSIAQHPKPSDSTFFSKNK 289


>ref|XP_002892238.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338080|gb|EFH68497.1| AAA-type ATPase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 939

 Score =  125 bits (313), Expect = 5e-27
 Identities = 63/100 (63%), Positives = 78/100 (78%), Gaps = 7/100 (7%)
 Frame = +1

Query: 13  ETPGVSEKLWVEKYAPNSFTELLSDEQTNREVLLWLKQWDSGVFGSDIRSTKDDVLSSLR 192
           E   + EKLWV+KY+P+SFTELLSDEQTNREVLLWLKQWD+ VFGS+IRST ++VLS+L+
Sbjct: 225 EASVMHEKLWVDKYSPSSFTELLSDEQTNREVLLWLKQWDASVFGSEIRSTTEEVLSALK 284

Query: 193 RHSTVTHHKKLSDTSFTSKNR-------RFPYPYKASVSN 291
           RHST +HH+K SD++FT K +        F YP  A VSN
Sbjct: 285 RHSTSSHHQK-SDSAFTRKKQFNRWSKESFRYPKNADVSN 323


>ref|XP_002518124.1| chromosome transmission fidelity factor, putative [Ricinus
           communis] gi|223542720|gb|EEF44257.1| chromosome
           transmission fidelity factor, putative [Ricinus
           communis]
          Length = 813

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/75 (78%), Positives = 68/75 (90%)
 Frame = +1

Query: 16  TPGVSEKLWVEKYAPNSFTELLSDEQTNREVLLWLKQWDSGVFGSDIRSTKDDVLSSLRR 195
           T  + E+LWV+KYAPNSFTELLSDEQTNREVLLWLKQWDS VFGS+IRST DD+LSSLRR
Sbjct: 207 TEMMHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSDDILSSLRR 266

Query: 196 HSTVTHHKKLSDTSF 240
           HSTV+ H+KLS ++F
Sbjct: 267 HSTVSQHQKLSHSNF 281


>gb|AAB80633.1| Similar to Saccharomyces CHL12 (gb|Z49259) [Arabidopsis thaliana]
          Length = 505

 Score =  123 bits (308), Expect = 2e-26
 Identities = 63/100 (63%), Positives = 77/100 (77%), Gaps = 7/100 (7%)
 Frame = +1

Query: 13  ETPGVSEKLWVEKYAPNSFTELLSDEQTNREVLLWLKQWDSGVFGSDIRSTKDDVLSSLR 192
           ET  + EKLWV+KY+P+SFTELLSDEQTNREVLLWLKQWD+ VFGS+IRST + VLS+L+
Sbjct: 217 ETSVMHEKLWVDKYSPSSFTELLSDEQTNREVLLWLKQWDASVFGSEIRSTTEAVLSALK 276

Query: 193 RHSTVTHHKKLSDTSFTSKNR-------RFPYPYKASVSN 291
           RHST +HH+K SD++FT K +        F Y   A VSN
Sbjct: 277 RHSTTSHHQK-SDSAFTRKKQFNRWSKESFGYSKNAEVSN 315


>ref|NP_171966.2| chromosome transmission fidelity protein 18 [Arabidopsis thaliana]
           gi|332189616|gb|AEE27737.1| chromosome transmission
           fidelity protein 18 [Arabidopsis thaliana]
          Length = 943

 Score =  123 bits (308), Expect = 2e-26
 Identities = 63/100 (63%), Positives = 77/100 (77%), Gaps = 7/100 (7%)
 Frame = +1

Query: 13  ETPGVSEKLWVEKYAPNSFTELLSDEQTNREVLLWLKQWDSGVFGSDIRSTKDDVLSSLR 192
           ET  + EKLWV+KY+P+SFTELLSDEQTNREVLLWLKQWD+ VFGS+IRST + VLS+L+
Sbjct: 217 ETSVMHEKLWVDKYSPSSFTELLSDEQTNREVLLWLKQWDASVFGSEIRSTTEAVLSALK 276

Query: 193 RHSTVTHHKKLSDTSFTSKNR-------RFPYPYKASVSN 291
           RHST +HH+K SD++FT K +        F Y   A VSN
Sbjct: 277 RHSTTSHHQK-SDSAFTRKKQFNRWSKESFGYSKNAEVSN 315