BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027317
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158685.1| PREDICTED: putative F-box/LRR-repeat protein...    71   2e-10
ref|XP_004134905.1| PREDICTED: putative F-box/LRR-repeat protein...    71   2e-10
ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi...    69   8e-10
ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] g...    69   1e-09
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...    66   7e-09

>ref|XP_004158685.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus]
          Length = 273

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 51/153 (33%), Positives = 81/153 (52%), Gaps = 6/153 (3%)
 Frame = +1

Query: 262 NWLDMPSDVMLVILFKLDVFQILCYAQFVCSSWLQLAKDPFLYRSILVPDRYNS------ 423
           NWL++P++V+ VIL KL   +IL  AQ VCS W ++ KDPFL+R I   D +NS      
Sbjct: 11  NWLELPAEVIFVILHKLGAIEILTTAQNVCSLWYKICKDPFLWRVI---DMHNSGDLNSF 67

Query: 424 KALDLLCSNNKKGMVLGLRVLKDAVKRSSGELKEISLAKSWCTDDLLLTSVMKNMTGTYL 603
             L+++C              K AV RS G+L EI++ + + +D+LLL       +   +
Sbjct: 68  DHLEIMC--------------KHAVDRSCGQLVEINI-EHFGSDELLLYIA---NSSKQV 109

Query: 604 KSLKLASFREITRNQLTASAFRKLHFLEELELK 702
           + L+L  +      ++   A  +L  LE LE++
Sbjct: 110 RRLRLMGYSLYFTKEVLGVAVSELPLLEHLEIQ 142


>ref|XP_004134905.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus]
          Length = 277

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 51/153 (33%), Positives = 81/153 (52%), Gaps = 6/153 (3%)
 Frame = +1

Query: 262 NWLDMPSDVMLVILFKLDVFQILCYAQFVCSSWLQLAKDPFLYRSILVPDRYNS------ 423
           NWL++P++V+ VIL KL   +IL  AQ VCS W ++ KDPFL+R I   D +NS      
Sbjct: 11  NWLELPAEVIFVILHKLGAIEILTTAQNVCSLWYKICKDPFLWRVI---DMHNSGDLNSF 67

Query: 424 KALDLLCSNNKKGMVLGLRVLKDAVKRSSGELKEISLAKSWCTDDLLLTSVMKNMTGTYL 603
             L+++C              K AV RS G+L EI++ + + +D+LLL       +   +
Sbjct: 68  DHLEIMC--------------KHAVDRSCGQLVEINI-EHFGSDELLLYIA---NSSKQV 109

Query: 604 KSLKLASFREITRNQLTASAFRKLHFLEELELK 702
           + L+L  +      ++   A  +L  LE LE++
Sbjct: 110 RRLRLMGYSLYFTKEVLGVAVSELPLLEHLEIQ 142


>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
           gi|449490588|ref|XP_004158648.1| PREDICTED: F-box
           protein SKIP19-like [Cucumis sativus]
          Length = 311

 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 52/146 (35%), Positives = 78/146 (53%)
 Frame = +1

Query: 262 NWLDMPSDVMLVILFKLDVFQILCYAQFVCSSWLQLAKDPFLYRSILVPDRYNSKALDLL 441
           NWL++P DV  +IL KL   +IL YAQ+VCSSW ++ +DP ++R  ++  RY     D+ 
Sbjct: 16  NWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWR--VIDMRYPCDWWDMD 73

Query: 442 CSNNKKGMVLGLRVLKDAVKRSSGELKEISLAKSWCTDDLLLTSVMKNMTGTYLKSLKLA 621
            +  +        + + AVKRS G+L   ++ + + TDDLLL       +   L  L+L 
Sbjct: 74  YNLEE--------LCRQAVKRSCGQLIHFNI-EHFGTDDLLL---YITQSCNQLSRLRLV 121

Query: 622 SFREITRNQLTASAFRKLHFLEELEL 699
               I+   L   A  KL  LE+LEL
Sbjct: 122 YCNRISDEGL-VEAVSKLPLLEDLEL 146


>ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482930|gb|AES64133.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 332

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 4/150 (2%)
 Frame = +1

Query: 262 NWLDMPSDVMLVILFKLDVFQILCYAQFVCSSWLQLAKDPFLYRSILVP----DRYNSKA 429
           NWLD+PSDV+L I  KL    +L  A  VC++W +++KDPFLY +I +P    D  +   
Sbjct: 24  NWLDLPSDVVLTIFRKLHTIDLLHRAHNVCTTWRKISKDPFLYHTIDMPNIGTDLSSDFY 83

Query: 430 LDLLCSNNKKGMVLGLRVLKDAVKRSSGELKEISLAKSWCTDDLLLTSVMKNMTGTYLKS 609
           L++LC                AV  SSG+  +I++ + + TDDLL        +  +L+ 
Sbjct: 84  LEILCQR--------------AVDYSSGQATDINI-EYFGTDDLLRHIA---DSANHLQR 125

Query: 610 LKLASFREITRNQLTASAFRKLHFLEELEL 699
           L+L     +T   L   A  KL  LEEL++
Sbjct: 126 LRLLGCYNVTDEGLCEVA-GKLSHLEELDI 154


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 2/152 (1%)
 Frame = +1

Query: 250 QQQVNWLDMPSDVMLVILFKLDVFQILCYAQFVCSSWLQLAKDPFLYRSILVPDRYNSKA 429
           +++ NWLD+P DV+  I  KL   +IL  AQ VCS W  ++K+P L+R+I          
Sbjct: 15  EEERNWLDLPRDVVCTIFQKLGAIEILTRAQRVCSVWRGISKEPLLWRTI---------- 64

Query: 430 LDLLCSNNKKGMVLGLRVLKDAVKRSSGELKEISLAKSWCTDDLL--LTSVMKNMTGTYL 603
            D+  S + +   + L +   A+  SSG L  I++ + + TDDLL  +T    N     L
Sbjct: 65  -DMRNSGDIETNFVFLAMCHRAIDYSSGHLLHINI-EYFATDDLLRHITHSTSN-----L 117

Query: 604 KSLKLASFREITRNQLTASAFRKLHFLEELEL 699
           +SL+LA   +I+   L   A ++L  LEEL++
Sbjct: 118 RSLRLACCYQISDEGLCEIA-KELPQLEELDI 148