BLASTX nr result

ID: Coptis25_contig00027312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027312
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273004.1| PREDICTED: transcription factor MYB86 [Vitis...    74   1e-11
emb|CAN82534.1| hypothetical protein VITISV_033687 [Vitis vinifera]    74   1e-11
ref|XP_002509854.1| r2r3-myb transcription factor, putative [Ric...    72   4e-11
ref|XP_002304517.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002298014.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09

>ref|XP_002273004.1| PREDICTED: transcription factor MYB86 [Vitis vinifera]
           gi|297742235|emb|CBI34384.3| unnamed protein product
           [Vitis vinifera]
          Length = 304

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 35/53 (66%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
 Frame = -2

Query: 254 MDSNYLPPLL-NMENMVPMELHSCSLGGEDEMTTTMECLQRQEFNDWVESHQC 99
           MD+NYLPPL+ N+ENMVPM++ SCS+  E E+   +ECLQRQE NDWVES QC
Sbjct: 218 MDTNYLPPLVENIENMVPMQVQSCSIDEEGEIA--LECLQRQELNDWVESQQC 268


>emb|CAN82534.1| hypothetical protein VITISV_033687 [Vitis vinifera]
          Length = 287

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 35/53 (66%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
 Frame = -2

Query: 254 MDSNYLPPLL-NMENMVPMELHSCSLGGEDEMTTTMECLQRQEFNDWVESHQC 99
           MD+NYLPPL+ N+ENMVPM++ SCS+  E E+   +ECLQRQE NDWVES QC
Sbjct: 201 MDTNYLPPLVENIENMVPMQVQSCSIDEEGEIA--LECLQRQELNDWVESQQC 251


>ref|XP_002509854.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223549753|gb|EEF51241.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 332

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/54 (62%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
 Frame = -2

Query: 254 MDSNYLPPLL-NMENMVPMELHSCSLGGEDEMTTTMECLQRQEFNDWVESHQCT 96
           MD+NYLPPL+ NMENMVP+E+ SCS+  E E+   + CLQRQE N+WVES QC+
Sbjct: 242 MDTNYLPPLIENMENMVPIEMQSCSIDEEGEIA--LGCLQRQELNEWVESQQCS 293


>ref|XP_002304517.1| predicted protein [Populus trichocarpa] gi|222841949|gb|EEE79496.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/64 (57%), Positives = 47/64 (73%), Gaps = 2/64 (3%)
 Frame = -2

Query: 254 MDSNYLPPLL-NMENMVPMELHSCSLGGEDEMTTTMECLQRQEFN-DWVESHQCTKIEPT 81
           MD+NYLPPL+ NMENMVP+E+ SCS+  E E+  ++ECLQRQE N +WVES QC+     
Sbjct: 223 MDTNYLPPLIDNMENMVPIEMQSCSMNDEGEI--SLECLQRQELNIEWVESQQCSNFLFW 280

Query: 80  SNFE 69
            N E
Sbjct: 281 DNVE 284


>ref|XP_002298014.1| predicted protein [Populus trichocarpa] gi|222845272|gb|EEE82819.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
 Frame = -2

Query: 254 MDSNYLPPLLNMENMVPMELHSCSLGGEDEMTTTMECLQRQEFN-DWVESHQCTKIEPTS 78
           MD+NYLPPL+  +NM+P+E+ SCS+  E E+  ++ECLQRQE N +WVES QC+      
Sbjct: 223 MDTNYLPPLI--DNMMPIEMQSCSMNEEGEI--SLECLQRQELNIEWVESQQCSNFLFWD 278

Query: 77  NFE 69
           N E
Sbjct: 279 NVE 281


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