BLASTX nr result

ID: Coptis25_contig00027301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027301
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263442.2| PREDICTED: uncharacterized protein LOC100247...   184   2e-44
emb|CAN66169.1| hypothetical protein VITISV_000145 [Vitis vinifera]   184   2e-44
emb|CBI17905.3| unnamed protein product [Vitis vinifera]              169   7e-40
ref|XP_002519404.1| conserved hypothetical protein [Ricinus comm...   157   2e-36
ref|XP_002325256.1| predicted protein [Populus trichocarpa] gi|2...   157   2e-36

>ref|XP_002263442.2| PREDICTED: uncharacterized protein LOC100247938 [Vitis vinifera]
          Length = 1045

 Score =  184 bits (466), Expect = 2e-44
 Identities = 113/254 (44%), Positives = 158/254 (62%), Gaps = 14/254 (5%)
 Frame = +3

Query: 9    SFAQAIFIVAKGDSTRCEGRNKLCDVNVVQMKLLVKESVDA-EVLEYDHKRKAGWDTSNT 185
            SF QAIFI+  GDS+  + R K    +V+ MKL +  ++        DHKRKA WD SN 
Sbjct: 789  SFGQAIFILTTGDSSSYQER-KGNKSSVIHMKLQINLTIPTLGTPNMDHKRKAEWDLSNR 847

Query: 186  VKNQRTCDKGDTSTKKV---------FSRQSSSNTLDLNILAEEE---YNEDEEFKSVPS 329
             K+ RT ++  +    V         F+RQ S NTLDLNI A+E+    ++  E   + S
Sbjct: 848  TKSPRTDEEEGSCLISVEPGNSKILEFTRQLSFNTLDLNIRADEDDESKDKPRELSPISS 907

Query: 330  DLTEETATSSKSLNGFLCLIEHRFVFNQKSTQLSQMTEDFMSKLKRSFKEVFGSESKGCF 509
            DLT ETAT  ++ +GFL  IE+RF F +K+ Q  +M E F+SK+K SF+  + SE+   F
Sbjct: 908  DLTRETATDIQNPHGFLESIENRFTFKRKADQDREMREAFLSKIKGSFEVGYDSENTVSF 967

Query: 510  SVDQLVLEEIVNGWGFFLASFLENWLKDIFQTSLQMVKRGGKEG-SVRLSLGGKEDSGLD 686
            SV+Q +LEE++ G   FL S  E WLK++FQTS++ VK GGKEG  VRL L GK + GL+
Sbjct: 968  SVEQKLLEEVLAGCDSFLNSLFEKWLKEVFQTSVKTVKIGGKEGMEVRLRLVGKGEKGLE 1027

Query: 687  TGYMGTNLPRTIEV 728
             G+MG++LP+ I+V
Sbjct: 1028 DGFMGSSLPKKIQV 1041


>emb|CAN66169.1| hypothetical protein VITISV_000145 [Vitis vinifera]
          Length = 1032

 Score =  184 bits (466), Expect = 2e-44
 Identities = 113/254 (44%), Positives = 158/254 (62%), Gaps = 14/254 (5%)
 Frame = +3

Query: 9    SFAQAIFIVAKGDSTRCEGRNKLCDVNVVQMKLLVKESVDA-EVLEYDHKRKAGWDTSNT 185
            SF QAIFI+  GDS+  + R K    +V+ MKL +  ++        DHKRKA WD SN 
Sbjct: 776  SFGQAIFILTTGDSSSYQER-KGNKSSVIHMKLQINLTIPTLGTPNMDHKRKAEWDLSNR 834

Query: 186  VKNQRTCDKGDTSTKKV---------FSRQSSSNTLDLNILAEEE---YNEDEEFKSVPS 329
             K+ RT ++  +    V         F+RQ S NTLDLNI A+E+    ++  E   + S
Sbjct: 835  TKSPRTDEEEGSCLISVEPGNSKILEFTRQLSFNTLDLNIRADEDDESKDKPRELSPISS 894

Query: 330  DLTEETATSSKSLNGFLCLIEHRFVFNQKSTQLSQMTEDFMSKLKRSFKEVFGSESKGCF 509
            DLT ETAT  ++ +GFL  IE+RF F +K+ Q  +M E F+SK+K SF+  + SE+   F
Sbjct: 895  DLTRETATDIQNPHGFLESIENRFTFKRKADQDREMREAFLSKIKGSFEVGYDSENTVSF 954

Query: 510  SVDQLVLEEIVNGWGFFLASFLENWLKDIFQTSLQMVKRGGKEG-SVRLSLGGKEDSGLD 686
            SV+Q +LEE++ G   FL S  E WLK++FQTS++ VK GGKEG  VRL L GK + GL+
Sbjct: 955  SVEQKLLEEVLAGCDSFLNSLFEKWLKEVFQTSVKTVKIGGKEGMEVRLCLVGKGEKGLE 1014

Query: 687  TGYMGTNLPRTIEV 728
             G+MG++LP+ I+V
Sbjct: 1015 DGFMGSSLPKKIQV 1028


>emb|CBI17905.3| unnamed protein product [Vitis vinifera]
          Length = 974

 Score =  169 bits (427), Expect = 7e-40
 Identities = 107/245 (43%), Positives = 150/245 (61%), Gaps = 5/245 (2%)
 Frame = +3

Query: 9    SFAQAIFIVAKGDSTRCEGRNKLCDVNVVQMKLLVKESVDA-EVLEYDHKRKAGWDTSNT 185
            SF QAIFI+  GDS+  + R K    +V+ MKL +  ++        DHKRKA    S  
Sbjct: 736  SFGQAIFILTTGDSSSYQER-KGNKSSVIHMKLQINLTIPTLGTPNMDHKRKADCLISVE 794

Query: 186  VKNQRTCDKGDTSTKKVFSRQSSSNTLDLNILAEEE---YNEDEEFKSVPSDLTEETATS 356
              N +  +         F+RQ S NTLDLNI A+E+    ++  E   + SDLT ETAT 
Sbjct: 795  PGNSKILE---------FTRQLSFNTLDLNIRADEDDESKDKPRELSPISSDLTRETATD 845

Query: 357  SKSLNGFLCLIEHRFVFNQKSTQLSQMTEDFMSKLKRSFKEVFGSESKGCFSVDQLVLEE 536
             ++ +GFL  IE+RF F +K+ Q  +M E F+SK+K SF+  + SE+   FSV+Q +LEE
Sbjct: 846  IQNPHGFLESIENRFTFKRKADQDREMREAFLSKIKGSFEVGYDSENTVSFSVEQKLLEE 905

Query: 537  IVNGWGFFLASFLENWLKDIFQTSLQMVKRGGKEG-SVRLSLGGKEDSGLDTGYMGTNLP 713
            ++ G   FL S  E WLK++FQTS++ VK GGKEG  VRL L GK + GL+ G+MG++LP
Sbjct: 906  VLAGCDSFLNSLFEKWLKEVFQTSVKTVKIGGKEGMEVRLRLVGKGEKGLEDGFMGSSLP 965

Query: 714  RTIEV 728
            + I+V
Sbjct: 966  KKIQV 970


>ref|XP_002519404.1| conserved hypothetical protein [Ricinus communis]
            gi|223541471|gb|EEF43021.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1008

 Score =  157 bits (398), Expect = 2e-36
 Identities = 105/253 (41%), Positives = 149/253 (58%), Gaps = 13/253 (5%)
 Frame = +3

Query: 9    SFAQAIFIVAKGDSTRCEGRNKLCDVNVVQMKLLVKES-VDA-EVLEYDHKRKAGWDTSN 182
            +  QAIFI+ +G         K    +V++M L VK++ +D+      D KRKA  D S 
Sbjct: 752  NLGQAIFILTRGSDFMGYEHGKTNQNSVIRMTLEVKQTKLDSFGTPNTDRKRKAERDISG 811

Query: 183  TVKNQRTCDKGD----TSTKKVFSRQSSSNTLDLNILAEEEYNEDEE-----FKSVPSDL 335
              K  R+ +K D    +S K  FSRQ+S NTLDLNI A EE +E  E     F  + SDL
Sbjct: 812  RRKAPRSEEKEDAENGSSKKDCFSRQTSFNTLDLNIKANEEDDEHGEEKHVEFSPISSDL 871

Query: 336  TEETATSSKSLNGFLCLIEHRFVFNQKSTQLSQ-MTEDFMSKLKRSFKEVFGSESKGCFS 512
            T E A+   + + FL LI++RFV N+   Q  + M E+F +K+ +  +E FG ++   FS
Sbjct: 872  TREAASDPVAPSRFLDLIKNRFVLNRNDGQGRKIMREEFSTKMNKCVEEAFGDQNSIGFS 931

Query: 513  VDQLVLEEIVNGWGFFLASFLENWLKDIFQTSLQMVKRGGKEGSV-RLSLGGKEDSGLDT 689
            +++ V EEIV+ +G+ + S +E WLKDIFQT+L  +K GGKEG+V RL   G  D  L  
Sbjct: 932  IEERVSEEIVDKFGYIVNSVIERWLKDIFQTTLHTIKIGGKEGTVIRLCFEGTNDKVLGD 991

Query: 690  GYMGTNLPRTIEV 728
            G+MGT LP+ I+V
Sbjct: 992  GFMGTCLPKKIQV 1004


>ref|XP_002325256.1| predicted protein [Populus trichocarpa] gi|222866690|gb|EEF03821.1|
            predicted protein [Populus trichocarpa]
          Length = 899

 Score =  157 bits (397), Expect = 2e-36
 Identities = 104/244 (42%), Positives = 141/244 (57%), Gaps = 6/244 (2%)
 Frame = +3

Query: 15   AQAIFIVAKGDSTRCEGRNKLCDVNVVQMKLLVKESVDAEVLEYDHKRKAGWDTSNTVKN 194
            +Q IFI+ +GDS   E R    D +V+QM L  K S  ++    D K  A W        
Sbjct: 671  SQVIFILTRGDSIIYEDRKM--DDSVIQMTL--KISGKSKSPRVDEKENASWFPDE---- 722

Query: 195  QRTCDKGDTSTKKVFSRQSSSNTLDLNILAEEEYNEDE----EFKSVPSDLTEETATSSK 362
                   + + KK FSRQSS NTLDLN+ A+E+ +E E    EF  + SDLT ET++   
Sbjct: 723  -------NGNKKKDFSRQSSFNTLDLNLKADED-DESEGKPGEFSPISSDLTRETSSDQL 774

Query: 363  SLNGFLCLIEHRFVFNQKSTQLSQMTEDFMSKLKRSFKEVFGSESKGCFSVDQLVLEEIV 542
            S  G L +I++RFVF++   Q  +MTE   SK+KR+  EVFG ++   FS+++ VL E++
Sbjct: 775  SPKGLLDMIKNRFVFDRNQAQDIEMTEVLSSKIKRNVNEVFGDQNGVYFSIEERVLGEVL 834

Query: 543  NGWGFFLASFLENWLKDIFQTSLQMVKRGGKEG--SVRLSLGGKEDSGLDTGYMGTNLPR 716
             G G F+ S  E WLK IFQTSL+ VK GGKE    VRL  G   D   + G+MGT LP+
Sbjct: 835  EGSGSFVNSQFEKWLKGIFQTSLKTVKLGGKEEGIGVRLCFGFTSDRVFEDGFMGTCLPK 894

Query: 717  TIEV 728
             I+V
Sbjct: 895  KIQV 898


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