BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027258
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   187   8e-46
emb|CBI32069.3| unnamed protein product [Vitis vinifera]              187   8e-46
gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth...   186   2e-45
ref|XP_003570680.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   180   1e-43
ref|XP_002520197.1| helicase, putative [Ricinus communis] gi|223...   180   1e-43

>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Vitis vinifera]
          Length = 1174

 Score =  187 bits (475), Expect = 8e-46
 Identities = 89/114 (78%), Positives = 102/114 (89%)
 Frame = -3

Query: 344  AIRGENDLWLAIVLRNKILLDLKPAQLAGVCGSLVSEGIKIRPSKNDSYIYEPSTAVVNI 165
            AIRGEN+LWLA+VLR+K+LL LKPAQLA VCGSLVSEGIK+RP KN+SYIYE ST V+N+
Sbjct: 1013 AIRGENELWLAMVLRSKVLLGLKPAQLAAVCGSLVSEGIKVRPWKNNSYIYEASTTVINV 1072

Query: 164  VEALDDQRSSFMLLQEKHSVKISCGLDSQFSGMVEAWASGLTWREIMMDCAMDE 3
            +  LD+QR+S + LQEKH V+I C LDSQFSGMVEAWASGLTWREIMMDCAMDE
Sbjct: 1073 ISLLDEQRNSLLQLQEKHDVQIPCCLDSQFSGMVEAWASGLTWREIMMDCAMDE 1126


>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
          Length = 1064

 Score =  187 bits (475), Expect = 8e-46
 Identities = 89/114 (78%), Positives = 102/114 (89%)
 Frame = -3

Query: 344  AIRGENDLWLAIVLRNKILLDLKPAQLAGVCGSLVSEGIKIRPSKNDSYIYEPSTAVVNI 165
            AIRGEN+LWLA+VLR+K+LL LKPAQLA VCGSLVSEGIK+RP KN+SYIYE ST V+N+
Sbjct: 903  AIRGENELWLAMVLRSKVLLGLKPAQLAAVCGSLVSEGIKVRPWKNNSYIYEASTTVINV 962

Query: 164  VEALDDQRSSFMLLQEKHSVKISCGLDSQFSGMVEAWASGLTWREIMMDCAMDE 3
            +  LD+QR+S + LQEKH V+I C LDSQFSGMVEAWASGLTWREIMMDCAMDE
Sbjct: 963  ISLLDEQRNSLLQLQEKHDVQIPCCLDSQFSGMVEAWASGLTWREIMMDCAMDE 1016


>gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana]
          Length = 1159

 Score =  186 bits (471), Expect = 2e-45
 Identities = 86/114 (75%), Positives = 104/114 (91%)
 Frame = -3

Query: 344  AIRGENDLWLAIVLRNKILLDLKPAQLAGVCGSLVSEGIKIRPSKNDSYIYEPSTAVVNI 165
            AIRGEN+LWLA+VLRNK+LLDLKPAQLA VCGSLVSEGI++RP KN+S++YEPST V+N+
Sbjct: 998  AIRGENELWLAMVLRNKLLLDLKPAQLAAVCGSLVSEGIRLRPWKNNSFVYEPSTTVLNV 1057

Query: 164  VEALDDQRSSFMLLQEKHSVKISCGLDSQFSGMVEAWASGLTWREIMMDCAMDE 3
            ++ L++ +SS + LQEKH V+I C LDSQFSGMVEAWASGLTW+EIMMDCAMDE
Sbjct: 1058 IDLLEETKSSILELQEKHGVQIPCCLDSQFSGMVEAWASGLTWKEIMMDCAMDE 1111


>ref|XP_003570680.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Brachypodium distachyon]
          Length = 1168

 Score =  180 bits (457), Expect = 1e-43
 Identities = 84/114 (73%), Positives = 100/114 (87%)
 Frame = -3

Query: 344  AIRGENDLWLAIVLRNKILLDLKPAQLAGVCGSLVSEGIKIRPSKNDSYIYEPSTAVVNI 165
            AIRGEN+LWLA+VLRNK+LLDLKP+QLA VCGSLVSEGIK+RP KN SY+YEPS+ V  +
Sbjct: 1007 AIRGENELWLAMVLRNKVLLDLKPSQLAAVCGSLVSEGIKLRPWKNSSYVYEPSSVVTGV 1066

Query: 164  VEALDDQRSSFMLLQEKHSVKISCGLDSQFSGMVEAWASGLTWREIMMDCAMDE 3
            +  LD+QR+S + LQEKH VKI C +D+QF+GMVEAWASGLTWREIMMD AMD+
Sbjct: 1067 INYLDEQRNSLIELQEKHGVKIPCEIDTQFAGMVEAWASGLTWREIMMDSAMDD 1120


>ref|XP_002520197.1| helicase, putative [Ricinus communis] gi|223540689|gb|EEF42252.1|
            helicase, putative [Ricinus communis]
          Length = 1161

 Score =  180 bits (456), Expect = 1e-43
 Identities = 86/114 (75%), Positives = 103/114 (90%)
 Frame = -3

Query: 344  AIRGENDLWLAIVLRNKILLDLKPAQLAGVCGSLVSEGIKIRPSKNDSYIYEPSTAVVNI 165
            AIRGEN+LWLA+VLR+KILLDLKPAQLA VC S+VSEGIK+R  +N+SYIYEPS+AV NI
Sbjct: 1000 AIRGENELWLAMVLRSKILLDLKPAQLAAVCASVVSEGIKVRAWENNSYIYEPSSAVFNI 1059

Query: 164  VEALDDQRSSFMLLQEKHSVKISCGLDSQFSGMVEAWASGLTWREIMMDCAMDE 3
            +  L++QRSS + LQEKH V+ISC LDSQFSGMVEAWASGL+W+E+MMDCAMD+
Sbjct: 1060 IGKLEEQRSSLLQLQEKHGVEISCYLDSQFSGMVEAWASGLSWKEMMMDCAMDD 1113