BLASTX nr result
ID: Coptis25_contig00027239
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00027239 (251 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABF70109.1| ubiquitin ligase SINAT5-related (seven in absenti... 115 1e-32 gb|AEQ94181.1| ubiquitin ligase SINAT3 [Elaeis guineensis] 115 3e-32 ref|XP_002516674.1| Ubiquitin ligase SINAT3, putative [Ricinus c... 114 8e-32 ref|XP_002267317.1| PREDICTED: E3 ubiquitin-protein ligase SINAT... 115 8e-32 emb|CAB40577.1| SINA1p [Vitis vinifera] 115 8e-32 >gb|ABF70109.1| ubiquitin ligase SINAT5-related (seven in absentia protein family) [Musa balbisiana] Length = 301 Score = 115 bits (289), Expect(2) = 1e-32 Identities = 53/60 (88%), Positives = 56/60 (93%) Frame = +3 Query: 3 VFNCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDETEAQNFSYSLVVVANGQKLIWEGHPR 182 VFNCFGQYFCLHFEAFQLGMAPVY+AFLRFMGDE EA+NFSYSL V ANG+KLIWEG PR Sbjct: 182 VFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNFSYSLEVGANGRKLIWEGTPR 241 Score = 49.3 bits (116), Expect(2) = 1e-32 Identities = 23/27 (85%), Positives = 24/27 (88%) Frame = +1 Query: 169 RGIRDTHRNVRDSYDGLIIQCNMALFF 249 R IRDTHR VRDS+DGLIIQ NMALFF Sbjct: 241 RSIRDTHRKVRDSHDGLIIQRNMALFF 267 >gb|AEQ94181.1| ubiquitin ligase SINAT3 [Elaeis guineensis] Length = 196 Score = 115 bits (289), Expect(2) = 3e-32 Identities = 53/60 (88%), Positives = 56/60 (93%) Frame = +3 Query: 3 VFNCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDETEAQNFSYSLVVVANGQKLIWEGHPR 182 VFNCFGQYFCLHFEAFQLGMAPVY+AFLRFMGDE EA+NFSYSL V ANG+KLIWEG PR Sbjct: 77 VFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNFSYSLEVGANGRKLIWEGTPR 136 Score = 47.8 bits (112), Expect(2) = 3e-32 Identities = 22/27 (81%), Positives = 24/27 (88%) Frame = +1 Query: 169 RGIRDTHRNVRDSYDGLIIQCNMALFF 249 R IRD+HR VRDS+DGLIIQ NMALFF Sbjct: 136 RSIRDSHRKVRDSHDGLIIQRNMALFF 162 >ref|XP_002516674.1| Ubiquitin ligase SINAT3, putative [Ricinus communis] gi|223544169|gb|EEF45693.1| Ubiquitin ligase SINAT3, putative [Ricinus communis] Length = 346 Score = 114 bits (286), Expect(2) = 8e-32 Identities = 52/60 (86%), Positives = 57/60 (95%) Frame = +3 Query: 3 VFNCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDETEAQNFSYSLVVVANGQKLIWEGHPR 182 VF+CFGQYFCLHFEAFQLGMAPVY+AFLRFMGDETEA+N+SYSL V ANG+KLIWEG PR Sbjct: 227 VFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARNYSYSLEVGANGRKLIWEGTPR 286 Score = 47.4 bits (111), Expect(2) = 8e-32 Identities = 21/27 (77%), Positives = 24/27 (88%) Frame = +1 Query: 169 RGIRDTHRNVRDSYDGLIIQCNMALFF 249 R +RD+HR VRDS+DGLIIQ NMALFF Sbjct: 286 RSVRDSHRKVRDSHDGLIIQRNMALFF 312 >ref|XP_002267317.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Vitis vinifera] gi|297742353|emb|CBI34502.3| unnamed protein product [Vitis vinifera] Length = 316 Score = 115 bits (288), Expect(2) = 8e-32 Identities = 53/60 (88%), Positives = 56/60 (93%) Frame = +3 Query: 3 VFNCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDETEAQNFSYSLVVVANGQKLIWEGHPR 182 VFNCFGQYFCLHFEAFQLGMAPVY+AFLRFMGDE EA+NFSYSL V ANG+KLIWEG PR Sbjct: 197 VFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEIEARNFSYSLEVGANGRKLIWEGTPR 256 Score = 46.6 bits (109), Expect(2) = 8e-32 Identities = 21/27 (77%), Positives = 24/27 (88%) Frame = +1 Query: 169 RGIRDTHRNVRDSYDGLIIQCNMALFF 249 R IRD+H+ VRDS+DGLIIQ NMALFF Sbjct: 256 RSIRDSHKKVRDSHDGLIIQRNMALFF 282 >emb|CAB40577.1| SINA1p [Vitis vinifera] Length = 315 Score = 115 bits (288), Expect(2) = 8e-32 Identities = 53/60 (88%), Positives = 56/60 (93%) Frame = +3 Query: 3 VFNCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDETEAQNFSYSLVVVANGQKLIWEGHPR 182 VFNCFGQYFCLHFEAFQLGMAPVY+AFLRFMGDE EA+NFSYSL V ANG+KLIWEG PR Sbjct: 197 VFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEIEARNFSYSLEVGANGRKLIWEGTPR 256 Score = 46.6 bits (109), Expect(2) = 8e-32 Identities = 21/27 (77%), Positives = 24/27 (88%) Frame = +1 Query: 169 RGIRDTHRNVRDSYDGLIIQCNMALFF 249 R IRD+H+ VRDS+DGLIIQ NMALFF Sbjct: 256 RSIRDSHKKVRDSHDGLIIQRNMALFF 282