BLASTX nr result

ID: Coptis25_contig00027227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027227
         (717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526902.1| PREDICTED: probable cation-transporting ATPa...    59   1e-08
ref|XP_003523192.1| PREDICTED: probable cation-transporting ATPa...    58   5e-08
ref|XP_003632541.1| PREDICTED: probable cation-transporting ATPa...    59   1e-06
emb|CBI27691.3| unnamed protein product [Vitis vinifera]               59   1e-06
ref|XP_002272397.1| PREDICTED: probable cation-transporting ATPa...    59   1e-06

>ref|XP_003526902.1| PREDICTED: probable cation-transporting ATPase-like [Glycine max]
          Length = 1188

 Score = 59.3 bits (142), Expect(2) = 1e-08
 Identities = 24/38 (63%), Positives = 32/38 (84%)
 Frame = -2

Query: 212 ISGKVVEQVDLLKKRQGPWHLDVWQFAILYVLWVAAVL 99
           + GKVV++VDLL+K+Q PW LDVW FAILY  W++A+L
Sbjct: 6   VGGKVVDRVDLLRKKQWPWRLDVWPFAILYGAWLSAIL 43



 Score = 25.8 bits (55), Expect(2) = 1e-08
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 108 SCTFPLQEFVDTAIIFGMMAVVH 40
           S   P  +FVD AI+FG +  +H
Sbjct: 40  SAILPSLDFVDAAIVFGALVSLH 62


>ref|XP_003523192.1| PREDICTED: probable cation-transporting ATPase-like [Glycine max]
          Length = 1180

 Score = 57.8 bits (138), Expect(2) = 5e-08
 Identities = 23/38 (60%), Positives = 31/38 (81%)
 Frame = -2

Query: 212 ISGKVVEQVDLLKKRQGPWHLDVWQFAILYVLWVAAVL 99
           + GKVV+QVDLL+K++ PW LDVW FAILY  W++ +L
Sbjct: 6   VGGKVVDQVDLLRKKRWPWRLDVWPFAILYGAWLSTIL 43



 Score = 25.4 bits (54), Expect(2) = 5e-08
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 108 SCTFPLQEFVDTAIIFGMMAVVH 40
           S   P  +FVD AI+FG +  +H
Sbjct: 40  STILPSLDFVDAAIVFGALVSLH 62


>ref|XP_003632541.1| PREDICTED: probable cation-transporting ATPase-like isoform 2
           [Vitis vinifera]
          Length = 1189

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = -2

Query: 212 ISGKVVEQVDLLKKRQGPWHLDVWQFAILYVLWVAAVL 99
           + GKVVE VDLL+KR  PW LDVW FAILY +W+  V+
Sbjct: 6   VGGKVVEDVDLLRKRHWPWRLDVWPFAILYTIWLVTVV 43


>emb|CBI27691.3| unnamed protein product [Vitis vinifera]
          Length = 1074

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = -2

Query: 212 ISGKVVEQVDLLKKRQGPWHLDVWQFAILYVLWVAAVL 99
           + GKVVE VDLL+KR  PW LDVW FAILY +W+  V+
Sbjct: 6   VGGKVVEDVDLLRKRHWPWRLDVWPFAILYTIWLVTVV 43


>ref|XP_002272397.1| PREDICTED: probable cation-transporting ATPase-like isoform 1
           [Vitis vinifera]
          Length = 1191

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = -2

Query: 212 ISGKVVEQVDLLKKRQGPWHLDVWQFAILYVLWVAAVL 99
           + GKVVE VDLL+KR  PW LDVW FAILY +W+  V+
Sbjct: 6   VGGKVVEDVDLLRKRHWPWRLDVWPFAILYTIWLVTVV 43


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