BLASTX nr result

ID: Coptis25_contig00027206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027206
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64134.1| hypothetical protein VITISV_006986 [Vitis vinifera]    56   4e-06
emb|CAN62918.1| hypothetical protein VITISV_029735 [Vitis vinifera]    55   6e-06
emb|CAN64548.1| hypothetical protein VITISV_026047 [Vitis vinifera]    55   8e-06

>emb|CAN64134.1| hypothetical protein VITISV_006986 [Vitis vinifera]
          Length = 998

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/51 (49%), Positives = 34/51 (66%)
 Frame = -3

Query: 179 YSLQFKTLEEAYKFYNDYAKVVGFSVRKYTFRVHKNGDRVKRRFLCSAAGE 27
           Y LQF  ++EA  FYN  AKV GFS+RK   +  KNGD + R+++CS  G+
Sbjct: 177 YKLQFDCIDEAETFYNVLAKVAGFSIRKDDLKQDKNGDIISRKWVCSREGQ 227


>emb|CAN62918.1| hypothetical protein VITISV_029735 [Vitis vinifera]
          Length = 742

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/50 (50%), Positives = 33/50 (66%)
 Frame = -3

Query: 179 YSLQFKTLEEAYKFYNDYAKVVGFSVRKYTFRVHKNGDRVKRRFLCSAAG 30
           Y LQF  ++EA  FYN  AKV GFS+RK   +  KNGD + R+++CS  G
Sbjct: 62  YKLQFDCIDEAKSFYNMLAKVAGFSIRKDDLKRDKNGDIISRKWVCSREG 111


>emb|CAN64548.1| hypothetical protein VITISV_026047 [Vitis vinifera]
          Length = 876

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
 Frame = -3

Query: 263 NDE--VTDTRDTSVSRLEAARLYEKDKTTFYSLQFKTLEEAYKFYNDYAKVVGFSVRKYT 90
           ND+  +  T D   + L+   L        Y LQF  ++EA  FYN  A+V GFS+RK  
Sbjct: 22  NDDAFIXGTYDMGXNGLKQKVLKGISDEEVYKLQFDRIDEAETFYNMLARVAGFSIRKDD 81

Query: 89  FRVHKNGDRVKRRFLCSAAGE 27
            +  KNGD + R+++CS  G+
Sbjct: 82  LKRDKNGDIISRKWVCSREGQ 102


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