BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027204
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511931.1| Structural maintenance of chromosome 1 prote...   100   2e-19
ref|XP_003633963.1| PREDICTED: golgin candidate 4-like isoform 2...    94   9e-18
emb|CBI40445.3| unnamed protein product [Vitis vinifera]               94   9e-18
ref|XP_002279017.1| PREDICTED: golgin candidate 4-like isoform 1...    94   9e-18
ref|XP_003534532.1| PREDICTED: golgin candidate 3-like [Glycine ...    94   1e-17

>ref|XP_002511931.1| Structural maintenance of chromosome 1 protein, putative [Ricinus
           communis] gi|223549111|gb|EEF50600.1| Structural
           maintenance of chromosome 1 protein, putative [Ricinus
           communis]
          Length = 755

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 56/102 (54%), Positives = 73/102 (71%), Gaps = 5/102 (4%)
 Frame = +2

Query: 17  DGTFESKSNGR---YSPSLLRTPPSSNGIHSRFKDEIEQYKAQVQRLQTSEAEIKALSVN 187
           DG +  + N     +S   LR+P  +NGI S F  EIEQYKA+++RLQ SE+EIKALSVN
Sbjct: 36  DGDYSDRRNSHSFAHSKPALRSP-IANGIDSSFHSEIEQYKAEIRRLQESESEIKALSVN 94

Query: 188 YAALLKEKEEQISRLQEEKGSLRKNLEA--NVWSASTAESPR 307
           YAALLKEKE+QISRL +E GSL+ NL+A     + S +E+P+
Sbjct: 95  YAALLKEKEDQISRLNQENGSLKHNLDATEEALNVSRSENPK 136


>ref|XP_003633963.1| PREDICTED: golgin candidate 4-like isoform 2 [Vitis vinifera]
          Length = 776

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 49/77 (63%), Positives = 63/77 (81%), Gaps = 2/77 (2%)
 Frame = +2

Query: 83  SNGIHSRFKDEIEQYKAQVQRLQTSEAEIKALSVNYAALLKEKEEQISRLQEEKGSLRKN 262
           SNGI S +  EIEQYKA+++RLQ SEAEIKALS+NYAALLK+KE+QIS+L +E GSL+ N
Sbjct: 53  SNGIDSAYNSEIEQYKAEIKRLQESEAEIKALSINYAALLKDKEDQISKLSKENGSLKHN 112

Query: 263 LEAN--VWSASTAESPR 307
           L++   V SAS +E+ R
Sbjct: 113 LDSTNAVLSASRSENSR 129


>emb|CBI40445.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 49/77 (63%), Positives = 63/77 (81%), Gaps = 2/77 (2%)
 Frame = +2

Query: 83  SNGIHSRFKDEIEQYKAQVQRLQTSEAEIKALSVNYAALLKEKEEQISRLQEEKGSLRKN 262
           SNGI S +  EIEQYKA+++RLQ SEAEIKALS+NYAALLK+KE+QIS+L +E GSL+ N
Sbjct: 53  SNGIDSAYNSEIEQYKAEIKRLQESEAEIKALSINYAALLKDKEDQISKLSKENGSLKHN 112

Query: 263 LEAN--VWSASTAESPR 307
           L++   V SAS +E+ R
Sbjct: 113 LDSTNAVLSASRSENSR 129


>ref|XP_002279017.1| PREDICTED: golgin candidate 4-like isoform 1 [Vitis vinifera]
          Length = 790

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 49/77 (63%), Positives = 63/77 (81%), Gaps = 2/77 (2%)
 Frame = +2

Query: 83  SNGIHSRFKDEIEQYKAQVQRLQTSEAEIKALSVNYAALLKEKEEQISRLQEEKGSLRKN 262
           SNGI S +  EIEQYKA+++RLQ SEAEIKALS+NYAALLK+KE+QIS+L +E GSL+ N
Sbjct: 53  SNGIDSAYNSEIEQYKAEIKRLQESEAEIKALSINYAALLKDKEDQISKLSKENGSLKHN 112

Query: 263 LEAN--VWSASTAESPR 307
           L++   V SAS +E+ R
Sbjct: 113 LDSTNAVLSASRSENSR 129


>ref|XP_003534532.1| PREDICTED: golgin candidate 3-like [Glycine max]
          Length = 758

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 49/75 (65%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
 Frame = +2

Query: 50  YSPSLLRTPPSSNGIHSR-FKDEIEQYKAQVQRLQTSEAEIKALSVNYAALLKEKEEQIS 226
           +S SL R+PP++NG     +  EIEQYKA+++RLQ SEAEIKALSVNYAALLKEKE+ I 
Sbjct: 49  HSISLPRSPPATNGTSDHPYAPEIEQYKAEIKRLQASEAEIKALSVNYAALLKEKEDHIV 108

Query: 227 RLQEEKGSLRKNLEA 271
           RL +E GSL++NLEA
Sbjct: 109 RLNKENGSLKQNLEA 123