BLASTX nr result

ID: Coptis25_contig00027194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027194
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACL14364.1| CUP-SHAPED COTYLEDON3 [Aquilegia coerulea]             234   2e-59
ref|XP_002273222.2| PREDICTED: protein CUP-SHAPED COTYLEDON 3-li...   147   2e-33
ref|XP_002300627.1| NAC domain protein, IPR003441 [Populus trich...   127   2e-27
ref|XP_002510719.1| transcription factor, putative [Ricinus comm...   123   4e-26
emb|CBI40758.3| unnamed protein product [Vitis vinifera]              109   5e-22

>gb|ACL14364.1| CUP-SHAPED COTYLEDON3 [Aquilegia coerulea]
          Length = 363

 Score =  234 bits (596), Expect = 2e-59
 Identities = 122/200 (61%), Positives = 144/200 (72%)
 Frame = -2

Query: 750 EWVLCRILHKTGGENRSPLFQAPSYFKEFITSPLALLPPVLESSPKLVSEIQTPTFPLQI 571
           EWVLCRIL KTG E +SPLF A + F+E  +SP   LPP+LE S  +    QTP   LQ 
Sbjct: 164 EWVLCRILQKTG-EKKSPLFHAHNCFQEVFSSPSNFLPPMLEPSTTVT---QTPLHSLQN 219

Query: 570 SSLIKEETDLKTLLNPSGFPAHTLPTNYQSSFSPTTVNSTDLSSSIMFKTLLSNQDTILK 391
           S  +K+E+DLK +LNP     H   TN+QS++SPT++  T   SS MFK  LSNQD+ILK
Sbjct: 220 SFALKQESDLKAILNPYAIQLHDFHTNFQSTYSPTSIKDTSPLSSFMFKNSLSNQDSILK 279

Query: 390 ESTVQKQFKTDTAFFHFQPGDANFYGLDKVQQNLWQNPISFEMDCGSVLGFSTYDVNTVH 211
           E TV KQFK +T F HFQP DA F  +DKVQQNLWQ+P+SFEMDC SVLGFS  DV+TVH
Sbjct: 280 EPTVPKQFKRETNFPHFQPFDATFNCMDKVQQNLWQDPLSFEMDCSSVLGFSADDVDTVH 339

Query: 210 DTSTSVAFNRTGSQMMLDPP 151
           + STSVAFNRT  QMMLDPP
Sbjct: 340 EMSTSVAFNRTRFQMMLDPP 359


>ref|XP_002273222.2| PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Vitis vinifera]
          Length = 405

 Score =  147 bits (371), Expect = 2e-33
 Identities = 102/245 (41%), Positives = 137/245 (55%), Gaps = 33/245 (13%)
 Frame = -2

Query: 750 EWVLCRILHKTGGENRSPLFQAPSYF---KEFITSPLALLPPVLESSPKLVSEIQTPTFP 580
           EWV+CRI HKTG E ++P+FQ  +Y            + LP +LES   L+     PT  
Sbjct: 161 EWVICRIFHKTG-EKKNPMFQGQAYLLGSSAAAAVATSSLPALLESQTTLLESQSHPTMQ 219

Query: 579 LQISSLI-------KEETDLKTLLNPS------GFPAHTLPTNYQSSFSPTT-------V 460
             ISS         +E  +LK L+NP        FP ++   +   S +PTT       +
Sbjct: 220 GGISSSFLVHHHHDQESNELKALINPVLSQSPLAFPINSGFQSCSFSTTPTTNIPNTNNI 279

Query: 459 NST----DLSSSIMFKTLLSNQDTILKE-STVQKQFKTDTAFFHFQPGDANFYGLDKVQQ 295
           NST    + S+SI+FK+LLS+Q+  LKE +T+ KQ KT+  F HFQ  DAN + +D++  
Sbjct: 280 NSTTGNNNPSTSILFKSLLSHQECSLKEQTTIPKQCKTEANFSHFQLPDANMHWVDRMNS 339

Query: 294 NLWQNPISFEMD--CGSVLGFSTYDV---NTVHDTSTSVAFNRTGSQMMLDPPLI*CSGE 130
           NL QNP+ FEMD   G VLGF+        TVH+ STS+AFNR G QMM+D P+    GE
Sbjct: 340 NLHQNPLFFEMDYCSGGVLGFTAATATGGETVHEMSTSIAFNRAGFQMMVDFPIRVPGGE 399

Query: 129 SGPLD 115
           S PLD
Sbjct: 400 SWPLD 404


>ref|XP_002300627.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222842353|gb|EEE79900.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 403

 Score =  127 bits (320), Expect = 2e-27
 Identities = 99/243 (40%), Positives = 132/243 (54%), Gaps = 31/243 (12%)
 Frame = -2

Query: 750 EWVLCRILHKTGGENRSPLFQAPSYFKEFITSPL--ALLPPVLESSPKLVSEIQ---TPT 586
           EWV+CRI HK G +    L     Y     +SP     LPP+LE+S  +  + Q   T  
Sbjct: 161 EWVICRIFHKKGEKKNVFLQAGQGYHLMEASSPANSGSLPPLLEASASIFDQCQSKNTVV 220

Query: 585 FPLQISSLIKE--ETDLKTLLNPSGFPAHTLPTN-YQSSFSPTTV--------------- 460
              Q + LI E  E DLK+LLNP    ++ +  N +Q  FSPT++               
Sbjct: 221 EAFQNAFLIHEHQENDLKSLLNPLVSQSNAMSINGFQPCFSPTSISINSTTTSTNKNTDT 280

Query: 459 NSTDLSSSIMFKTLLSNQDTILKE--STVQKQFKTDTAFFHFQPGDANFYGLDKV-QQNL 289
           N+ + S S++FK++LS QD  LKE  ST+ KQ  T+  F HFQ  DA+   +DK+   N 
Sbjct: 281 NTNNQSPSMLFKSILSYQDCALKEQSSTLYKQCNTEANFSHFQLHDAHLGCVDKIIHPNP 340

Query: 288 WQN-PISFEMDCGS-VLGFS--TYDVNTV-HDTSTSVAFNRTGSQMMLDPPLI*CSGESG 124
           +QN P+ FEMDC S +LGFS      +T+ HD STS+AF+R G QMMLD P I    ES 
Sbjct: 341 YQNNPLFFEMDCSSNILGFSESASAADTIAHDMSTSIAFSRAGLQMMLDTP-IRLPAESW 399

Query: 123 PLD 115
           P D
Sbjct: 400 PFD 402


>ref|XP_002510719.1| transcription factor, putative [Ricinus communis]
           gi|223551420|gb|EEF52906.1| transcription factor,
           putative [Ricinus communis]
          Length = 402

 Score =  123 bits (309), Expect = 4e-26
 Identities = 100/245 (40%), Positives = 138/245 (56%), Gaps = 32/245 (13%)
 Frame = -2

Query: 750 EWVLCRILHKTGGENRSPLFQAPSYFKEFITSPLALLPPVLESSPKLVSEIQTP--TFPL 577
           EWV+CRI +KTG E ++ L Q   +  E  + P +   P L  +P  + E Q+   T  L
Sbjct: 161 EWVICRIFNKTG-EKKNALLQGQRFLLEATSPPNSCSLPSLLEAPSTLMECQSQAGTDGL 219

Query: 576 QISSLIK-EETDLKTLL-NPSGFPAH-TLPTN---YQSSFSPTTV--------------N 457
           Q   LI+ +E DLK+LL +P     H T+  N   +Q SFSPTT                
Sbjct: 220 QNPFLIQHQENDLKSLLLSPLLSQCHNTVSINGIQFQPSFSPTTPIAISTNTETNKNIDT 279

Query: 456 STDLSSSIMFKTLLSNQDTILKE-STVQKQFKTDTAFFHFQPGDANF-YGLDKVQ----- 298
           +T+ + S++FK+LLS+QD  LKE S V KQ KT+  F HFQ  +AN  + +DK+      
Sbjct: 280 NTNNNPSMLFKSLLSHQDCTLKEQSPVLKQCKTEANFSHFQLPEANLNWMMDKIHHHHQH 339

Query: 297 QNLWQNPISFEMDCGSVLGFSTYDVN---TVHDTSTSVAFNRTGSQMMLDPPLI*CSGES 127
           Q+ +Q P+SFEMDC ++LG +    +   T H+ STS+AFNR G QMMLD P I    ES
Sbjct: 340 QSPYQYPLSFEMDC-NMLGITAAATDADITAHEMSTSIAFNRAGFQMMLDAP-IRHPAES 397

Query: 126 GPLDT 112
            PLD+
Sbjct: 398 WPLDS 402


>emb|CBI40758.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  109 bits (273), Expect = 5e-22
 Identities = 62/122 (50%), Positives = 83/122 (68%), Gaps = 4/122 (3%)
 Frame = -2

Query: 468 TTVNSTDLSSSIMFKTLLSNQDTILKE-STVQKQFKTDTAFFHFQPGDANFYGLDKVQQN 292
           +T  + + S+SI+FK+LLS+Q+  LKE +T+ KQ KT+  F HFQ  DAN + +D++  N
Sbjct: 198 STTGNNNPSTSILFKSLLSHQECSLKEQTTIPKQCKTEANFSHFQLPDANMHWVDRMNSN 257

Query: 291 LWQNPISFEMD--CGSVLGFSTYD-VNTVHDTSTSVAFNRTGSQMMLDPPLI*CSGESGP 121
           L QNP+ FEMD   G VLGF+      TVH+ STS+AFNR G QMM+D P+    GES P
Sbjct: 258 LHQNPLFFEMDYCSGGVLGFTAATATETVHEMSTSIAFNRAGFQMMVDFPIRVPGGESWP 317

Query: 120 LD 115
           LD
Sbjct: 318 LD 319


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