BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027192
         (1029 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-l...   491   e-136
emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera]   483   e-134
ref|XP_004139042.1| PREDICTED: exosome complex component RRP45-l...   465   e-129
ref|XP_004170431.1| PREDICTED: exosome complex component RRP45-l...   459   e-127
ref|XP_002531128.1| exosome complex exonuclease rrp45, putative ...   457   e-126

>ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-like [Vitis vinifera]
          Length = 467

 Score =  491 bits (1263), Expect = e-136
 Identities = 239/302 (79%), Positives = 271/302 (89%)
 Frame = +1

Query: 124  MEQRLANTWRMTVNEKKFIETALLVDLRVDGRKPYDYRRLTIKFGKEDGSSEVQLGQTHV 303
            MEQRLA+T+RMTVNEKKFIE ALL DLR+DGR+P+D+RR++IKFG+EDGSSEVQLGQTHV
Sbjct: 1    MEQRLASTFRMTVNEKKFIEKALLSDLRIDGRRPFDFRRISIKFGREDGSSEVQLGQTHV 60

Query: 304  MGFVSSQLVQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGESAVELARIIDRGLRESRA 483
            MGFV+ QL+QPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGE+AVEL R+IDRGLRESRA
Sbjct: 61   MGFVTGQLIQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGEAAVELGRVIDRGLRESRA 120

Query: 484  VDTESLCVLAGKQVWSIRVDLHVIDXXXXXXXXXXXXXXXXXMTFRRPECTLGGEDGQEV 663
            VD ESLCVLAGK VWSIR+DLH+ID                 +TFRRPEC+ GGEDGQE+
Sbjct: 121  VDMESLCVLAGKLVWSIRIDLHIIDNGGNLIDAANIAALAALLTFRRPECSFGGEDGQEL 180

Query: 664  IVHPPEVKEPLPLIIHHLPIAVTFAFLGDGNIMVIDPSHSEEAVMGGRMTATLNMNGEIC 843
            IVHPPEV+EPLPLI+HHLPIAVTFA +G+ NIMVIDP+HSEEAVMGGRMTATLN NG++C
Sbjct: 181  IVHPPEVREPLPLIVHHLPIAVTFAIIGNENIMVIDPTHSEEAVMGGRMTATLNTNGDVC 240

Query: 844  AIQKAGGEGVMQSMIMQCLRIASVKAADITSKIKDAVEVYSTERAQRKIKRHSSVVPVDV 1023
            AIQKAGGEG++QS+IMQCLRIASVKAADITSKIK+AVE ++TERA RKIKRHSS + VDV
Sbjct: 241  AIQKAGGEGIIQSVIMQCLRIASVKAADITSKIKNAVEAFNTERALRKIKRHSSSIAVDV 300

Query: 1024 SG 1029
            SG
Sbjct: 301  SG 302


>emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera]
          Length = 476

 Score =  483 bits (1243), Expect = e-134
 Identities = 239/311 (76%), Positives = 271/311 (87%), Gaps = 9/311 (2%)
 Frame = +1

Query: 124  MEQRLANTWRMTVNEKKFIETALLVDLRVDGRKPYDYRRLTIKFGK---------EDGSS 276
            MEQRLA+T+RMTVNEKKFIE ALL DLR+DGR+P+D+RR++IKFG+         EDGSS
Sbjct: 1    MEQRLASTFRMTVNEKKFIEKALLSDLRIDGRRPFDFRRISIKFGRQVFIRTICAEDGSS 60

Query: 277  EVQLGQTHVMGFVSSQLVQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGESAVELARII 456
            EVQLGQTHVMGFV+ QL+QPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGE+AVEL R+I
Sbjct: 61   EVQLGQTHVMGFVTGQLIQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGEAAVELGRVI 120

Query: 457  DRGLRESRAVDTESLCVLAGKQVWSIRVDLHVIDXXXXXXXXXXXXXXXXXMTFRRPECT 636
            DRGLRESRAVD ESLCVLAGK VWSIR+DLH+ID                 +TFRRPEC+
Sbjct: 121  DRGLRESRAVDMESLCVLAGKLVWSIRIDLHIIDNGGNLIDAANIAALAALLTFRRPECS 180

Query: 637  LGGEDGQEVIVHPPEVKEPLPLIIHHLPIAVTFAFLGDGNIMVIDPSHSEEAVMGGRMTA 816
             GGEDGQE+IVHPPEV+EPLPLI+HHLPIAVTFA +G+ NIMVIDP+HSEEAVMGGRMTA
Sbjct: 181  FGGEDGQELIVHPPEVREPLPLIVHHLPIAVTFAIIGNENIMVIDPTHSEEAVMGGRMTA 240

Query: 817  TLNMNGEICAIQKAGGEGVMQSMIMQCLRIASVKAADITSKIKDAVEVYSTERAQRKIKR 996
            TLN NG++CAIQKAGGEG++QS+IMQCLRIASVKAADITSKIK+AVE ++TERA RKIKR
Sbjct: 241  TLNTNGDVCAIQKAGGEGIIQSVIMQCLRIASVKAADITSKIKNAVEAFNTERALRKIKR 300

Query: 997  HSSVVPVDVSG 1029
            HSS + VDVSG
Sbjct: 301  HSSSIAVDVSG 311


>ref|XP_004139042.1| PREDICTED: exosome complex component RRP45-like [Cucumis sativus]
          Length = 452

 Score =  465 bits (1197), Expect = e-129
 Identities = 231/302 (76%), Positives = 258/302 (85%)
 Frame = +1

Query: 124  MEQRLANTWRMTVNEKKFIETALLVDLRVDGRKPYDYRRLTIKFGKEDGSSEVQLGQTHV 303
            MEQRLANTWR++ NEKKFIETALL DLRVDGR P+DYR LTI FGK+DGSSEVQLGQTHV
Sbjct: 1    MEQRLANTWRLSANEKKFIETALLSDLRVDGRGPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 304  MGFVSSQLVQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGESAVELARIIDRGLRESRA 483
            MGFV++QLVQPYRDRPNEGTLSIYTEFSPMADPSFE GRPGESAVEL R+IDRGLRESRA
Sbjct: 61   MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 484  VDTESLCVLAGKQVWSIRVDLHVIDXXXXXXXXXXXXXXXXXMTFRRPECTLGGEDGQEV 663
            VDTESLCV++GK VW+IRVDLH++D                  TFRRPEC+L G+DGQEV
Sbjct: 121  VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANVAALAALSTFRRPECSLSGDDGQEV 180

Query: 664  IVHPPEVKEPLPLIIHHLPIAVTFAFLGDGNIMVIDPSHSEEAVMGGRMTATLNMNGEIC 843
            IVHPPEV+EPLPLIIHHLPIAVTFAF    +I+VIDP+H EEAVMGGRMT TLN N ++C
Sbjct: 181  IVHPPEVREPLPLIIHHLPIAVTFAFFRSESILVIDPTHCEEAVMGGRMTVTLNANNDVC 240

Query: 844  AIQKAGGEGVMQSMIMQCLRIASVKAADITSKIKDAVEVYSTERAQRKIKRHSSVVPVDV 1023
            AIQKAGGEGV++S+IMQCLRIASVKA DIT+KIK+AVE YS+ R  RKIKRH S V +DV
Sbjct: 241  AIQKAGGEGVLKSVIMQCLRIASVKAGDITTKIKNAVETYSSARQLRKIKRHPS-VNLDV 299

Query: 1024 SG 1029
             G
Sbjct: 300  GG 301


>ref|XP_004170431.1| PREDICTED: exosome complex component RRP45-like [Cucumis sativus]
          Length = 454

 Score =  459 bits (1181), Expect = e-127
 Identities = 231/304 (75%), Positives = 257/304 (84%), Gaps = 2/304 (0%)
 Frame = +1

Query: 124  MEQRLANTWRMTVNEKKFIETALLVDLRVDGRKPYDYRRLTIKFGKEDGSSEVQLGQTHV 303
            MEQRLANTWR++ NEKKFIETALL DLRVDGR P+DYR LTI FGK+DGSSEVQLGQTHV
Sbjct: 1    MEQRLANTWRLSANEKKFIETALLSDLRVDGRGPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 304  MGFVSSQLVQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGESAVELARIIDRGLRESRA 483
            MGFV++QLVQPYRDRPNEGTLSIYTEFSPMADPSFE GRPGESAVEL R+IDRGLRESRA
Sbjct: 61   MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 484  VDTESLCVLAGKQVWSIRVDLHVIDXXXXXXXXXXXXXXXXXMTFRRPECTLGGEDGQEV 663
            VDTESLCV++GK VW+IRVDLH++D                  TFRRPEC+L G+DGQEV
Sbjct: 121  VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANVAALAALSTFRRPECSLSGDDGQEV 180

Query: 664  IVHPPEVKEPLPLIIHHLPIAVTFAFLGDGNIMVIDPSHSEEAVMGGRMTATLNMNGEIC 843
            IVHPPEV+EPLPLIIHHLPIAVTFAF    +I+VIDP+H EEAVMGGRMT TLN N ++C
Sbjct: 181  IVHPPEVREPLPLIIHHLPIAVTFAFFRSESILVIDPTHCEEAVMGGRMTVTLNANNDVC 240

Query: 844  AIQKAGGEGVMQSMIMQCLRIASVKAADITSKIK--DAVEVYSTERAQRKIKRHSSVVPV 1017
            AIQKAGGEGV++S+IMQCLRIASVKA DIT+KIK   AVE YS+ R  RKIKRH S V +
Sbjct: 241  AIQKAGGEGVLKSVIMQCLRIASVKAGDITTKIKMQAAVETYSSARQLRKIKRHPS-VNL 299

Query: 1018 DVSG 1029
            DV G
Sbjct: 300  DVGG 303


>ref|XP_002531128.1| exosome complex exonuclease rrp45, putative [Ricinus communis]
            gi|223529292|gb|EEF31262.1| exosome complex exonuclease
            rrp45, putative [Ricinus communis]
          Length = 463

 Score =  457 bits (1177), Expect = e-126
 Identities = 225/301 (74%), Positives = 257/301 (85%)
 Frame = +1

Query: 124  MEQRLANTWRMTVNEKKFIETALLVDLRVDGRKPYDYRRLTIKFGKEDGSSEVQLGQTHV 303
            ME R+A+TWRM+VNEKKFIE+AL  DLR+DGR  +++R+LTIKFG+EDGSSEVQLGQTHV
Sbjct: 1    MEGRVASTWRMSVNEKKFIESALDSDLRIDGRNSHEFRKLTIKFGREDGSSEVQLGQTHV 60

Query: 304  MGFVSSQLVQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGESAVELARIIDRGLRESRA 483
            MGFV+SQLVQPYRDRPNEG+LSI++EFSPMADPSFE GRPGESAVEL RIIDRGLRESRA
Sbjct: 61   MGFVTSQLVQPYRDRPNEGSLSIFSEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120

Query: 484  VDTESLCVLAGKQVWSIRVDLHVIDXXXXXXXXXXXXXXXXXMTFRRPECTLGGEDGQEV 663
            VDTESLCVLAGK VW+IR+DLH++D                 +TFRRPECTLGGEDGQ+V
Sbjct: 121  VDTESLCVLAGKLVWAIRIDLHILDNGGNLVDAANIAALAALLTFRRPECTLGGEDGQQV 180

Query: 664  IVHPPEVKEPLPLIIHHLPIAVTFAFLGDGNIMVIDPSHSEEAVMGGRMTATLNMNGEIC 843
            IVHPPEVKEPLPLI+HHLPIAVTFAF    + MV+DP+H+EEAVM GRMT T+N NG+IC
Sbjct: 181  IVHPPEVKEPLPLIVHHLPIAVTFAFFSSEHTMVVDPTHNEEAVMTGRMTVTVNANGDIC 240

Query: 844  AIQKAGGEGVMQSMIMQCLRIASVKAADITSKIKDAVEVYSTERAQRKIKRHSSVVPVDV 1023
            +IQKAGGEGVMQS IM CLR+AS  A  IT KIKDAVE Y+TERA RKIKRHS+ V V+V
Sbjct: 241  SIQKAGGEGVMQSRIMHCLRVASRNAESITKKIKDAVEAYNTERALRKIKRHSTSVAVNV 300

Query: 1024 S 1026
            S
Sbjct: 301  S 301