BLASTX nr result
ID: Coptis25_contig00027167
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00027167 (298 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN76945.1| hypothetical protein VITISV_002430 [Vitis vinifera] 52 2e-15 emb|CBI35709.3| unnamed protein product [Vitis vinifera] 52 2e-15 ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal doma... 52 2e-15 ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal doma... 52 2e-15 emb|CBI41034.3| unnamed protein product [Vitis vinifera] 52 2e-15 >emb|CAN76945.1| hypothetical protein VITISV_002430 [Vitis vinifera] Length = 641 Score = 52.0 bits (123), Expect(3) = 2e-15 Identities = 22/31 (70%), Positives = 26/31 (83%) Frame = -2 Query: 219 ADLLDPARVYFDCKVVSQADCTEKHHKGLDV 127 A LLDP RVYF +V+SQADCT++H KGLDV Sbjct: 39 AKLLDPERVYFSSRVISQADCTQRHQKGLDV 69 Score = 47.8 bits (112), Expect(3) = 2e-15 Identities = 20/26 (76%), Positives = 24/26 (92%) Frame = -1 Query: 298 LRPFVRTFLREASSMYEMYIYTMGEK 221 LRP+V TFL+EAS M+EMYIYTMGE+ Sbjct: 7 LRPYVHTFLKEASKMFEMYIYTMGER 32 Score = 26.9 bits (58), Expect(3) = 2e-15 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = -3 Query: 125 VLGADSAVVILDDTE 81 VLG +SAV+ILDDTE Sbjct: 70 VLGQESAVLILDDTE 84 >emb|CBI35709.3| unnamed protein product [Vitis vinifera] Length = 638 Score = 52.0 bits (123), Expect(3) = 2e-15 Identities = 22/31 (70%), Positives = 26/31 (83%) Frame = -2 Query: 219 ADLLDPARVYFDCKVVSQADCTEKHHKGLDV 127 A LLDP RVYF +V+SQADCT++H KGLDV Sbjct: 39 AKLLDPERVYFSSRVISQADCTQRHQKGLDV 69 Score = 47.8 bits (112), Expect(3) = 2e-15 Identities = 20/26 (76%), Positives = 24/26 (92%) Frame = -1 Query: 298 LRPFVRTFLREASSMYEMYIYTMGEK 221 LRP+V TFL+EAS M+EMYIYTMGE+ Sbjct: 7 LRPYVHTFLKEASKMFEMYIYTMGER 32 Score = 26.9 bits (58), Expect(3) = 2e-15 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = -3 Query: 125 VLGADSAVVILDDTE 81 VLG +SAV+ILDDTE Sbjct: 70 VLGQESAVLILDDTE 84 >ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 4-like [Vitis vinifera] Length = 278 Score = 52.0 bits (123), Expect(3) = 2e-15 Identities = 22/31 (70%), Positives = 26/31 (83%) Frame = -2 Query: 219 ADLLDPARVYFDCKVVSQADCTEKHHKGLDV 127 A LLDP RVYF +V+SQADCT++H KGLDV Sbjct: 53 AKLLDPERVYFSSRVISQADCTQRHQKGLDV 83 Score = 47.8 bits (112), Expect(3) = 2e-15 Identities = 20/26 (76%), Positives = 24/26 (92%) Frame = -1 Query: 298 LRPFVRTFLREASSMYEMYIYTMGEK 221 LRP+V TFL+EAS M+EMYIYTMGE+ Sbjct: 21 LRPYVHTFLKEASKMFEMYIYTMGER 46 Score = 26.9 bits (58), Expect(3) = 2e-15 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = -3 Query: 125 VLGADSAVVILDDTE 81 VLG +SAV+ILDDTE Sbjct: 84 VLGQESAVLILDDTE 98 >ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 4-like [Vitis vinifera] Length = 278 Score = 52.0 bits (123), Expect(3) = 2e-15 Identities = 22/31 (70%), Positives = 26/31 (83%) Frame = -2 Query: 219 ADLLDPARVYFDCKVVSQADCTEKHHKGLDV 127 A LLDP RVYF +V+SQADCT++H KGLDV Sbjct: 53 AKLLDPERVYFSSRVISQADCTQRHQKGLDV 83 Score = 47.8 bits (112), Expect(3) = 2e-15 Identities = 20/26 (76%), Positives = 24/26 (92%) Frame = -1 Query: 298 LRPFVRTFLREASSMYEMYIYTMGEK 221 LRP+V TFL+EAS M+EMYIYTMGE+ Sbjct: 21 LRPYVHTFLKEASKMFEMYIYTMGER 46 Score = 26.9 bits (58), Expect(3) = 2e-15 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = -3 Query: 125 VLGADSAVVILDDTE 81 VLG +SAV+ILDDTE Sbjct: 84 VLGQESAVLILDDTE 98 >emb|CBI41034.3| unnamed protein product [Vitis vinifera] Length = 264 Score = 52.0 bits (123), Expect(3) = 2e-15 Identities = 22/31 (70%), Positives = 26/31 (83%) Frame = -2 Query: 219 ADLLDPARVYFDCKVVSQADCTEKHHKGLDV 127 A LLDP RVYF +V+SQADCT++H KGLDV Sbjct: 39 AKLLDPERVYFSSRVISQADCTQRHQKGLDV 69 Score = 47.8 bits (112), Expect(3) = 2e-15 Identities = 20/26 (76%), Positives = 24/26 (92%) Frame = -1 Query: 298 LRPFVRTFLREASSMYEMYIYTMGEK 221 LRP+V TFL+EAS M+EMYIYTMGE+ Sbjct: 7 LRPYVHTFLKEASKMFEMYIYTMGER 32 Score = 26.9 bits (58), Expect(3) = 2e-15 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = -3 Query: 125 VLGADSAVVILDDTE 81 VLG +SAV+ILDDTE Sbjct: 70 VLGQESAVLILDDTE 84