BLASTX nr result

ID: Coptis25_contig00027165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027165
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795...    45   6e-06

>ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795634 [Glycine max]
          Length = 1815

 Score = 44.7 bits (104), Expect(2) = 6e-06
 Identities = 22/52 (42%), Positives = 33/52 (63%)
 Frame = +1

Query: 154 LAKLRQIILKLKSVSVLECEACQLSLNCCSWFPCFKFHQFSSSNVVHSDIWG 309
           L KL+ ++  LK++ VL+CE+CQL  +  S FP       S+ + +HSDIWG
Sbjct: 598 LPKLKIMVPSLKNLRVLDCESCQLGKHVRSSFPQTVQRCDSAFSTIHSDIWG 649



 Score = 30.0 bits (66), Expect(2) = 6e-06
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +3

Query: 330 FGFQWFAEFVDEMWRIN-LFLKEDCTEFLNLFDAF 431
           FGF++F  F+DE  R   ++L +D +E L +F +F
Sbjct: 656 FGFRYFVTFIDEFSRCTWVYLMKDRSELLPIFVSF 690


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