BLASTX nr result

ID: Coptis25_contig00027163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027163
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518013.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    98   6e-19
ref|XP_003518689.1| PREDICTED: uncharacterized protein At1g26090...    95   5e-18
emb|CBI27076.3| unnamed protein product [Vitis vinifera]               94   2e-17
ref|XP_002524395.1| conserved hypothetical protein [Ricinus comm...    92   4e-17
ref|XP_002278585.1| PREDICTED: uncharacterized protein At1g26090...    91   1e-16

>ref|XP_003518013.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein At1g26090,
           chloroplastic-like [Glycine max]
          Length = 394

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 49/84 (58%), Positives = 60/84 (71%)
 Frame = +2

Query: 2   RLTAPSLLRLVDEAXXXXXXXXXXXXXKMSVEIWDDIDRILERASGSFLEPSKFRCYLMI 181
           RLTAPSLLRLVDEA             KMS EIWD +D++LER S +F  P KF C+L++
Sbjct: 171 RLTAPSLLRLVDEAVLRSGSRSYFNG-KMSSEIWDALDQMLERGSSAFSNPQKFGCFLVM 229

Query: 182 DPNSLTFVKSALRYWGCSIQSGAQ 253
           DPN+ T + SALRYWGC+IQ+GAQ
Sbjct: 230 DPNNPTSINSALRYWGCTIQAGAQ 253


>ref|XP_003518689.1| PREDICTED: uncharacterized protein At1g26090, chloroplastic-like
           [Glycine max]
          Length = 442

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/84 (55%), Positives = 59/84 (70%)
 Frame = +2

Query: 2   RLTAPSLLRLVDEAXXXXXXXXXXXXXKMSVEIWDDIDRILERASGSFLEPSKFRCYLMI 181
           RL APSLLRLVDEA             KMS EIWD +D++LER S +F  P KF C+L++
Sbjct: 219 RLAAPSLLRLVDEAMLISSSRSYFNG-KMSSEIWDTLDQMLERGSSAFSNPKKFGCFLVM 277

Query: 182 DPNSLTFVKSALRYWGCSIQSGAQ 253
           DPN+ T + SALRYWGC+IQ+GA+
Sbjct: 278 DPNNPTSINSALRYWGCTIQTGAR 301


>emb|CBI27076.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/84 (57%), Positives = 57/84 (67%)
 Frame = +2

Query: 2   RLTAPSLLRLVDEAXXXXXXXXXXXXXKMSVEIWDDIDRILERASGSFLEPSKFRCYLMI 181
           RL  PSLLRLVDEA             KMS EIWD ++R LER S +F EP +F CYL++
Sbjct: 219 RLAGPSLLRLVDEAMSLSTRGSNLNG-KMSSEIWDILERALERGSSAFGEPREFGCYLVV 277

Query: 182 DPNSLTFVKSALRYWGCSIQSGAQ 253
           DPN+   V SALRYWGC+IQ+GAQ
Sbjct: 278 DPNNPASVSSALRYWGCAIQAGAQ 301


>ref|XP_002524395.1| conserved hypothetical protein [Ricinus communis]
           gi|223536356|gb|EEF38006.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 417

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/84 (53%), Positives = 57/84 (67%)
 Frame = +2

Query: 2   RLTAPSLLRLVDEAXXXXXXXXXXXXXKMSVEIWDDIDRILERASGSFLEPSKFRCYLMI 181
           RL  PSLLRL+DEA             KMS EIWD ++++LER S  F +P KF C+L++
Sbjct: 194 RLAGPSLLRLIDEAMDLNGKRSLLNE-KMSAEIWDTLEKMLERGSSVFCDPYKFGCFLVM 252

Query: 182 DPNSLTFVKSALRYWGCSIQSGAQ 253
           DPN+   V SALRYWGC+IQ+GAQ
Sbjct: 253 DPNNPASVNSALRYWGCTIQAGAQ 276


>ref|XP_002278585.1| PREDICTED: uncharacterized protein At1g26090, chloroplastic-like
           [Vitis vinifera]
          Length = 441

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 47/84 (55%), Positives = 56/84 (66%)
 Frame = +2

Query: 2   RLTAPSLLRLVDEAXXXXXXXXXXXXXKMSVEIWDDIDRILERASGSFLEPSKFRCYLMI 181
           RL  PSLLRLVDEA             KMS EIWD ++R LE  S +F EP +F CYL++
Sbjct: 219 RLAGPSLLRLVDEAMSLSTRGSNLNG-KMSSEIWDILERALEVGSSAFGEPREFGCYLVV 277

Query: 182 DPNSLTFVKSALRYWGCSIQSGAQ 253
           DPN+   V SALRYWGC+IQ+GAQ
Sbjct: 278 DPNNPASVSSALRYWGCAIQAGAQ 301


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